RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 GPAA1O43292 621 aa16.29■□□□□ 0.2
CIITA-210ENST00000575513 FKTNO75072 461 aa16.29■□□□□ 0.2
CIITA-210ENST00000575513 SHMT1P34896 483 aa16.29■□□□□ 0.2
CIITA-210ENST00000575513 TAF1CQ15572 869 aaPredicted RBP16.29■□□□□ 0.2
CIITA-210ENST00000575513 CERKLQ49MI3 558 aaPredicted RBP16.29■□□□□ 0.2
CIITA-210ENST00000575513 SBK1Q52WX2 424 aa16.29■□□□□ 0.2
CIITA-210ENST00000575513 ARPP21Q9UBL0 812 aaPredicted RBP16.29■□□□□ 0.2
CIITA-210ENST00000575513 ZBTB21Q9ULJ3 1066 aa16.29■□□□□ 0.2
CIITA-210ENST00000575513 TRIM75PA6NK02 468 aa16.28■□□□□ 0.2
CIITA-210ENST00000575513 C19orf81C9J6K1 198 aa16.28■□□□□ 0.2
CIITA-210ENST00000575513 TLR2O60603 784 aa16.28■□□□□ 0.2
CIITA-210ENST00000575513 SPP2Q13103 211 aa16.28■□□□□ 0.2
CIITA-210ENST00000575513 SLC4A8Q2Y0W8 1093 aa16.28■□□□□ 0.2
CIITA-210ENST00000575513 SH3D19Q5HYK7 790 aa16.28■□□□□ 0.2
CIITA-210ENST00000575513 GPAT2Q6NUI2 795 aa16.28■□□□□ 0.2
CIITA-210ENST00000575513 CTR9Q6PD62 1173 aa16.28■□□□□ 0.2
CIITA-210ENST00000575513 PROCA1Q8NCQ7 364 aaPredicted RBP16.28■□□□□ 0.2
CIITA-210ENST00000575513 CABP5Q9NP86 173 aa16.28■□□□□ 0.2
CIITA-210ENST00000575513 HELLSQ9NRZ9 838 aa16.28■□□□□ 0.2
CIITA-210ENST00000575513 SIPA1L1O43166 1804 aa16.27■□□□□ 0.2
CIITA-210ENST00000575513 M0R2C6 588 aa16.27■□□□□ 0.2
CIITA-210ENST00000575513 PDHXO00330 501 aa16.27■□□□□ 0.2
CIITA-210ENST00000575513 BACE1P56817 501 aa16.27■□□□□ 0.2
CIITA-210ENST00000575513 JAG1P78504 1218 aa16.27■□□□□ 0.2
CIITA-210ENST00000575513 ABCB5Q2M3G0 1257 aa16.27■□□□□ 0.2
CIITA-210ENST00000575513 NACAP1Q9BZK3 213 aa16.27■□□□□ 0.2
CIITA-210ENST00000575513 MYH1P12882 1939 aa16.27■□□□□ 0.19
CIITA-210ENST00000575513 MYH7P12883 1935 aa16.27■□□□□ 0.19
CIITA-210ENST00000575513 TRIM6-TRIM34B2RNG4 842 aa16.26■□□□□ 0.19
CIITA-210ENST00000575513 GDF11O95390 407 aa16.26■□□□□ 0.19
CIITA-210ENST00000575513 GH2P01242 217 aa16.26■□□□□ 0.19
CIITA-210ENST00000575513 SP3Q02447 781 aa16.26■□□□□ 0.19
CIITA-210ENST00000575513 PKN2Q16513 984 aaKnown RBP16.26■□□□□ 0.19
CIITA-210ENST00000575513 ERICH6BQ5W0A0 696 aa16.26■□□□□ 0.19
CIITA-210ENST00000575513 C16orf86Q6ZW13 317 aa16.26■□□□□ 0.19
CIITA-210ENST00000575513 CTU1Q7Z7A3 348 aaKnown RBP16.26■□□□□ 0.19
CIITA-210ENST00000575513 CCDC17Q96LX7 622 aa16.26■□□□□ 0.19
CIITA-210ENST00000575513 PARK7Q99497 189 aaKnown RBP16.26■□□□□ 0.19
CIITA-210ENST00000575513 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.26■□□□□ 0.19
CIITA-210ENST00000575513 AGTPBP1Q9UPW5 1226 aa16.26■□□□□ 0.19
CIITA-210ENST00000575513 DOCK1Q14185 1865 aa16.26■□□□□ 0.19
CIITA-210ENST00000575513 DDX60LQ5H9U9 1706 aaKnown RBP16.25■□□□□ 0.19
CIITA-210ENST00000575513 USP17L10C9JJH3 530 aa16.25■□□□□ 0.19
CIITA-210ENST00000575513 CYP2D6P10635 497 aa16.25■□□□□ 0.19
CIITA-210ENST00000575513 PABPC4Q13310 644 aaKnown RBP eCLIP16.25■□□□□ 0.19
CIITA-210ENST00000575513 CCDC84Q86UT8 332 aaPredicted RBP16.25■□□□□ 0.19
CIITA-210ENST00000575513 IFNL3Q8IZI9 196 aa16.25■□□□□ 0.19
CIITA-210ENST00000575513 ERO1AQ96HE7 468 aa16.25■□□□□ 0.19
CIITA-210ENST00000575513 SEC62Q99442 399 aaKnown RBP16.25■□□□□ 0.19
CIITA-210ENST00000575513 APPP05067 770 aa16.24■□□□□ 0.19
CIITA-210ENST00000575513 CDK8P49336 464 aa16.24■□□□□ 0.19
CIITA-210ENST00000575513 ARHGEF6Q15052 776 aa16.24■□□□□ 0.19
CIITA-210ENST00000575513 MCMDC2Q4G0Z9 681 aa16.24■□□□□ 0.19
CIITA-210ENST00000575513 C17orf99Q6UX52 265 aa16.24■□□□□ 0.19
CIITA-210ENST00000575513 GADL1Q6ZQY3 521 aa16.24■□□□□ 0.19
CIITA-210ENST00000575513 RILPL2Q969X0 211 aa16.24■□□□□ 0.19
CIITA-210ENST00000575513 DYNLL2Q96FJ2 89 aa16.24■□□□□ 0.19
CIITA-210ENST00000575513 HIP1O00291 1037 aa16.23■□□□□ 0.19
CIITA-210ENST00000575513 PDE4AP27815 886 aa16.23■□□□□ 0.19
CIITA-210ENST00000575513 HOXA7P31268 230 aaPredicted RBP16.23■□□□□ 0.19
CIITA-210ENST00000575513 USP14P54578 494 aa16.23■□□□□ 0.19
CIITA-210ENST00000575513 HMGCS2P54868 508 aa16.23■□□□□ 0.19
CIITA-210ENST00000575513 EVX2Q03828 476 aa16.23■□□□□ 0.19
CIITA-210ENST00000575513 DGKZQ13574 1117 aa16.23■□□□□ 0.19
CIITA-210ENST00000575513 TMEM179Q6ZVK1 233 aa16.23■□□□□ 0.19
CIITA-210ENST00000575513 MCOLN1Q9GZU1 580 aa16.23■□□□□ 0.19
CIITA-210ENST00000575513 ZNF287Q9HBT7 754 aa16.23■□□□□ 0.19
CIITA-210ENST00000575513 EPB41L4AQ9HCS5 686 aaPredicted RBP16.23■□□□□ 0.19
CIITA-210ENST00000575513 TMOD4Q9NZQ9 345 aa16.23■□□□□ 0.19
CIITA-210ENST00000575513 PNMA3Q9UL41 463 aa16.23■□□□□ 0.19
CIITA-210ENST00000575513 CASP8AP2Q9UKL3 1982 aa16.23■□□□□ 0.19
CIITA-210ENST00000575513 ADGRA2Q96PE1 1338 aa16.22■□□□□ 0.19
CIITA-210ENST00000575513 CYP2D7A0A087X1C5 515 aa16.22■□□□□ 0.19
CIITA-210ENST00000575513 SDSP20132 328 aa16.22■□□□□ 0.19
CIITA-210ENST00000575513 GUCY1A2P33402 732 aa16.22■□□□□ 0.19
CIITA-210ENST00000575513 TDO2P48775 406 aa16.22■□□□□ 0.19
CIITA-210ENST00000575513 MFAP1P55081 439 aaKnown RBP16.22■□□□□ 0.19
CIITA-210ENST00000575513 MTMR2Q13614 643 aa16.22■□□□□ 0.19
CIITA-210ENST00000575513 RAB3GAP1Q15042 981 aa16.22■□□□□ 0.19
CIITA-210ENST00000575513 ALX1Q15699 326 aa16.22■□□□□ 0.19
CIITA-210ENST00000575513 SHROOM1Q2M3G4 852 aaPredicted RBP16.22■□□□□ 0.19
CIITA-210ENST00000575513 IFFO2Q5TF58 517 aa16.22■□□□□ 0.19
CIITA-210ENST00000575513 USP17L2Q6R6M4 530 aa16.22■□□□□ 0.19
CIITA-210ENST00000575513 C12orf42Q96LP6 360 aa16.22■□□□□ 0.19
CIITA-210ENST00000575513 KIAA1683Q9H0B3 1180 aa16.22■□□□□ 0.19
CIITA-210ENST00000575513 NAV1Q8NEY1 1877 aa16.22■□□□□ 0.19
CIITA-210ENST00000575513 ROBO3Q96MS0 1386 aa16.22■□□□□ 0.19
CIITA-210ENST00000575513 PHIPQ8WWQ0 1821 aa16.22■□□□□ 0.19
CIITA-210ENST00000575513 GNRH1P01148 92 aa16.21■□□□□ 0.19
CIITA-210ENST00000575513 TREML2Q5T2D2 321 aa16.21■□□□□ 0.19
CIITA-210ENST00000575513 CENPQQ7L2Z9 268 aaPredicted RBP16.21■□□□□ 0.19
CIITA-210ENST00000575513 SLC44A5Q8NCS7 719 aa16.21■□□□□ 0.19
CIITA-210ENST00000575513 NAPBQ9H115 298 aa16.21■□□□□ 0.19
CIITA-210ENST00000575513 A0A0D9SFI3 127 aa16.2■□□□□ 0.18
CIITA-210ENST00000575513 MINDY4BA8MYZ0 360 aa16.2■□□□□ 0.18
CIITA-210ENST00000575513 MPHOSPH10O00566 681 aaKnown RBP16.2■□□□□ 0.18
CIITA-210ENST00000575513 SLC3A2P08195 630 aaKnown RBP16.2■□□□□ 0.18
CIITA-210ENST00000575513 CYP2C8P10632 490 aa16.2■□□□□ 0.18
CIITA-210ENST00000575513 BCRP11274 1271 aa16.2■□□□□ 0.18
CIITA-210ENST00000575513 OSBPP22059 807 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms