RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 AS3MTQ9HBK9 375 aa18.17■□□□□ 0.5
LITAF-217ENST00000575426 CCL15-CCL14A0A0B4J2E2 113 aa18.16■□□□□ 0.5
LITAF-217ENST00000575426 CXCL11O14625 94 aa18.16■□□□□ 0.5
LITAF-217ENST00000575426 GDF11O95390 407 aa18.16■□□□□ 0.5
LITAF-217ENST00000575426 ALDH1A1P00352 501 aa18.16■□□□□ 0.5
LITAF-217ENST00000575426 CCL15Q16663 113 aa18.16■□□□□ 0.5
LITAF-217ENST00000575426 RUFY2Q8WXA3 655 aa18.16■□□□□ 0.5
LITAF-217ENST00000575426 PTPRFP10586 1907 aa18.15■□□□□ 0.5
LITAF-217ENST00000575426 CYP2D7A0A087X1C5 515 aa18.15■□□□□ 0.5
LITAF-217ENST00000575426 TRPA1O75762 1119 aa18.15■□□□□ 0.5
LITAF-217ENST00000575426 SLC3A2P08195 630 aaKnown RBP18.15■□□□□ 0.5
LITAF-217ENST00000575426 SHMT1P34896 483 aa18.15■□□□□ 0.5
LITAF-217ENST00000575426 CTCFP49711 727 aaPredicted RBP18.15■□□□□ 0.5
LITAF-217ENST00000575426 GABPAQ06546 454 aa18.15■□□□□ 0.5
LITAF-217ENST00000575426 RRP1BQ14684 758 aaKnown RBP18.15■□□□□ 0.5
LITAF-217ENST00000575426 ABCB5Q2M3G0 1257 aa18.15■□□□□ 0.5
LITAF-217ENST00000575426 IFNL1Q8IU54 200 aa18.15■□□□□ 0.5
LITAF-217ENST00000575426 DYNLL2Q96FJ2 89 aa18.15■□□□□ 0.5
LITAF-217ENST00000575426 MS4A4AQ96JQ5 239 aa18.15■□□□□ 0.5
LITAF-217ENST00000575426 ZNF287Q9HBT7 754 aa18.15■□□□□ 0.5
LITAF-217ENST00000575426 RNF186Q9NXI6 227 aa18.15■□□□□ 0.5
LITAF-217ENST00000575426 CCDC171Q6TFL3 1326 aa18.15■□□□□ 0.5
LITAF-217ENST00000575426 TESPA1A2RU30 521 aaPredicted RBP18.14■□□□□ 0.49
LITAF-217ENST00000575426 MPHOSPH10O00566 681 aaKnown RBP18.14■□□□□ 0.49
LITAF-217ENST00000575426 FOXN1O15353 648 aa18.14■□□□□ 0.49
LITAF-217ENST00000575426 CDK8P49336 464 aa18.14■□□□□ 0.49
LITAF-217ENST00000575426 EPB41L4AQ9HCS5 686 aaPredicted RBP18.14■□□□□ 0.49
LITAF-217ENST00000575426 SAGE1Q9NXZ1 904 aa18.14■□□□□ 0.49
LITAF-217ENST00000575426 KCNH4Q9UQ05 1017 aa18.14■□□□□ 0.49
LITAF-217ENST00000575426 AFG3L2Q9Y4W6 797 aa18.14■□□□□ 0.49
LITAF-217ENST00000575426 TRIM75PA6NK02 468 aa18.13■□□□□ 0.49
LITAF-217ENST00000575426 GH2P01242 217 aa18.13■□□□□ 0.49
LITAF-217ENST00000575426 EVX2Q03828 476 aa18.13■□□□□ 0.49
LITAF-217ENST00000575426 C16orf86Q6ZW13 317 aa18.13■□□□□ 0.49
LITAF-217ENST00000575426 FASTKD5Q7L8L6 764 aaKnown RBP18.13■□□□□ 0.49
LITAF-217ENST00000575426 ZNF280CQ8ND82 737 aa18.13■□□□□ 0.49
LITAF-217ENST00000575426 CCDC17Q96LX7 622 aa18.13■□□□□ 0.49
LITAF-217ENST00000575426 MKNK2Q9HBH9 465 aa18.13■□□□□ 0.49
LITAF-217ENST00000575426 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.13■□□□□ 0.49
LITAF-217ENST00000575426 ZBTB21Q9ULJ3 1066 aa18.13■□□□□ 0.49
LITAF-217ENST00000575426 HSPD1P10809 573 aaKnown RBP18.12■□□□□ 0.49
LITAF-217ENST00000575426 SPP2Q13103 211 aa18.12■□□□□ 0.49
LITAF-217ENST00000575426 RAB3GAP1Q15042 981 aa18.12■□□□□ 0.49
LITAF-217ENST00000575426 ALX1Q15699 326 aa18.12■□□□□ 0.49
LITAF-217ENST00000575426 ZNF589Q86UQ0 364 aaPredicted RBP18.12■□□□□ 0.49
LITAF-217ENST00000575426 CCDC84Q86UT8 332 aaPredicted RBP18.12■□□□□ 0.49
LITAF-217ENST00000575426 SKAP1Q86WV1 359 aa18.12■□□□□ 0.49
LITAF-217ENST00000575426 STK11IPQ8N1F8 1099 aa18.12■□□□□ 0.49
LITAF-217ENST00000575426 SLC44A5Q8NCS7 719 aa18.12■□□□□ 0.49
LITAF-217ENST00000575426 BRI3BPQ8WY22 251 aa18.12■□□□□ 0.49
LITAF-217ENST00000575426 PCNTO95613 3336 aa18.12■□□□□ 0.49
LITAF-217ENST00000575426 IGF2BP3O00425 579 aaKnown RBP eCLIP18.11■□□□□ 0.492e-6■□□□□ 11
LITAF-217ENST00000575426 CHMLP26374 656 aa18.11■□□□□ 0.49
LITAF-217ENST00000575426 PDE4BQ07343 736 aa18.11■□□□□ 0.49
LITAF-217ENST00000575426 PPARAQ07869 468 aa18.11■□□□□ 0.49
LITAF-217ENST00000575426 VPS53Q5VIR6 699 aa18.11■□□□□ 0.49
LITAF-217ENST00000575426 GADL1Q6ZQY3 521 aa18.11■□□□□ 0.49
LITAF-217ENST00000575426 ZNF444Q8N0Y2 327 aaPredicted RBP18.11■□□□□ 0.49
LITAF-217ENST00000575426 WDR18Q9BV38 432 aa18.11■□□□□ 0.49
LITAF-217ENST00000575426 TSKSQ9UJT2 592 aa18.11■□□□□ 0.49
LITAF-217ENST00000575426 CASP8AP2Q9UKL3 1982 aa18.1■□□□□ 0.49
LITAF-217ENST00000575426 RAD50Q92878 1312 aa18.1■□□□□ 0.49
LITAF-217ENST00000575426 JAG1P78504 1218 aa18.1■□□□□ 0.49
LITAF-217ENST00000575426 BMP2KLQ5H9B9 411 aa18.1■□□□□ 0.49
LITAF-217ENST00000575426 TMEM179Q6ZVK1 233 aa18.1■□□□□ 0.49
LITAF-217ENST00000575426 PTPN18Q99952 460 aa18.1■□□□□ 0.49
LITAF-217ENST00000575426 ROBO3Q96MS0 1386 aa18.09■□□□□ 0.49
LITAF-217ENST00000575426 A0A0G2JLL6 359 aaPredicted RBP18.09■□□□□ 0.49
LITAF-217ENST00000575426 C19orf81C9J6K1 198 aa18.09■□□□□ 0.49
LITAF-217ENST00000575426 BTBD19C9JJ37 291 aa18.09■□□□□ 0.49
LITAF-217ENST00000575426 USP17L10C9JJH3 530 aa18.09■□□□□ 0.49
LITAF-217ENST00000575426 SMIM22K7EJ46 135 aa18.09■□□□□ 0.49
LITAF-217ENST00000575426 TBC1D8O95759 1140 aa18.09■□□□□ 0.49
LITAF-217ENST00000575426 FGAP02671 866 aa18.09■□□□□ 0.49
LITAF-217ENST00000575426 HSPA8P11142 646 aaKnown RBP18.09■□□□□ 0.49
LITAF-217ENST00000575426 LBX1P52954 281 aa18.09■□□□□ 0.49
LITAF-217ENST00000575426 TAF1CQ15572 869 aaPredicted RBP18.09■□□□□ 0.49
LITAF-217ENST00000575426 SHROOM1Q2M3G4 852 aaPredicted RBP18.09■□□□□ 0.49
LITAF-217ENST00000575426 PRRT2Q7Z6L0 340 aaPredicted RBP18.09■□□□□ 0.49
LITAF-217ENST00000575426 ANKRD23Q86SG2 305 aa18.09■□□□□ 0.49
LITAF-217ENST00000575426 ZCCHC17Q9NP64 241 aaKnown RBP18.09■□□□□ 0.49
LITAF-217ENST00000575426 TMOD4Q9NZQ9 345 aa18.09■□□□□ 0.49
LITAF-217ENST00000575426 AKR1B1P15121 316 aa18.08■□□□□ 0.48
LITAF-217ENST00000575426 SEPT2Q15019 361 aa18.08■□□□□ 0.48
LITAF-217ENST00000575426 CASC1Q6TDU7 716 aa18.08■□□□□ 0.48
LITAF-217ENST00000575426 FAM43AQ8N2R8 423 aa18.08■□□□□ 0.48
LITAF-217ENST00000575426 FEZ1Q99689 392 aa18.08■□□□□ 0.48
LITAF-217ENST00000575426 DSCC1Q9BVC3 393 aa18.08■□□□□ 0.48
LITAF-217ENST00000575426 ZFYVE28Q9HCC9 887 aa18.08■□□□□ 0.48
LITAF-217ENST00000575426 CTNNA3Q9UI47 895 aa18.08■□□□□ 0.48
LITAF-217ENST00000575426 MYH4Q9Y623 1939 aa18.08■□□□□ 0.48
LITAF-217ENST00000575426 ZMYM6O95789 1325 aa18.07■□□□□ 0.48
LITAF-217ENST00000575426 FOXP2O15409 715 aa18.07■□□□□ 0.48
LITAF-217ENST00000575426 HMGCS2P54868 508 aa18.07■□□□□ 0.48
LITAF-217ENST00000575426 BACE1P56817 501 aa18.07■□□□□ 0.48
LITAF-217ENST00000575426 CTDSPL2Q05D32 466 aa18.07■□□□□ 0.48
LITAF-217ENST00000575426 MTMR2Q13614 643 aa18.07■□□□□ 0.48
LITAF-217ENST00000575426 PROCA1Q8NCQ7 364 aaPredicted RBP18.07■□□□□ 0.48
LITAF-217ENST00000575426 LOC285556D6RIA3 1793 aa18.07■□□□□ 0.48
LITAF-217ENST00000575426 PDHXO00330 501 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms