RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 SWAP70Q9UH65 585 aa19.38■□□□□ 0.69
PFN1-203ENST00000574872 DOCK1Q14185 1865 aa19.37■□□□□ 0.69
PFN1-203ENST00000574872 ROBO3Q96MS0 1386 aa19.37■□□□□ 0.69
PFN1-203ENST00000574872 PTH1RQ03431 593 aa19.37■□□□□ 0.69
PFN1-203ENST00000574872 CTDSPL2Q05D32 466 aa19.37■□□□□ 0.69
PFN1-203ENST00000574872 NOGQ13253 232 aa19.37■□□□□ 0.69
PFN1-203ENST00000574872 DSCC1Q9BVC3 393 aa19.37■□□□□ 0.69
PFN1-203ENST00000574872 ZMYM6O95789 1325 aa19.36■□□□□ 0.69
PFN1-203ENST00000574872 MPHOSPH10O00566 681 aaKnown RBP19.36■□□□□ 0.69
PFN1-203ENST00000574872 PRDM1O75626 825 aa19.36■□□□□ 0.69
PFN1-203ENST00000574872 GH2P01242 217 aa19.36■□□□□ 0.69
PFN1-203ENST00000574872 PTPRAP18433 802 aa19.36■□□□□ 0.69
PFN1-203ENST00000574872 KIF23Q02241 960 aaPredicted RBP19.36■□□□□ 0.69
PFN1-203ENST00000574872 ABCB5Q2M3G0 1257 aa19.36■□□□□ 0.69
PFN1-203ENST00000574872 ZBTB21Q9ULJ3 1066 aa19.36■□□□□ 0.69
PFN1-203ENST00000574872 ZHX2Q9Y6X8 837 aa19.36■□□□□ 0.69
PFN1-203ENST00000574872 IRF6O14896 467 aa19.35■□□□□ 0.69
PFN1-203ENST00000574872 SLC3A2P08195 630 aaKnown RBP19.35■□□□□ 0.69
PFN1-203ENST00000574872 MKNK2Q9HBH9 465 aa19.35■□□□□ 0.69
PFN1-203ENST00000574872 INCENPQ9NQS7 918 aa19.35■□□□□ 0.69
PFN1-203ENST00000574872 ATAD5Q96QE3 1844 aa19.35■□□□□ 0.69
PFN1-203ENST00000574872 ASNSP08243 561 aa19.34■□□□□ 0.69
PFN1-203ENST00000574872 ZBTB48P10074 688 aaPredicted RBP19.34■□□□□ 0.69
PFN1-203ENST00000574872 AKR1B1P15121 316 aa19.34■□□□□ 0.69
PFN1-203ENST00000574872 PPATQ06203 517 aa19.34■□□□□ 0.69
PFN1-203ENST00000574872 PPIL2Q13356 520 aa19.34■□□□□ 0.69
PFN1-203ENST00000574872 RAB3GAP1Q15042 981 aa19.34■□□□□ 0.69
PFN1-203ENST00000574872 KIAA1211Q6ZU35 1233 aa19.34■□□□□ 0.69
PFN1-203ENST00000574872 TRIM75PA6NK02 468 aa19.33■□□□□ 0.68
PFN1-203ENST00000574872 TBC1D10CQ8IV04 446 aa19.33■□□□□ 0.68
PFN1-203ENST00000574872 CABP5Q9NP86 173 aa19.33■□□□□ 0.68
PFN1-203ENST00000574872 ANO2Q9NQ90 1003 aa19.33■□□□□ 0.68
PFN1-203ENST00000574872 TACC3Q9Y6A5 838 aa19.33■□□□□ 0.68
PFN1-203ENST00000574872 MYH8P13535 1937 aa19.33■□□□□ 0.68
PFN1-203ENST00000574872 PCNTO95613 3336 aa19.32■□□□□ 0.68
PFN1-203ENST00000574872 USP17L5A8MUK1 530 aa19.32■□□□□ 0.68
PFN1-203ENST00000574872 RASA1P20936 1047 aa19.32■□□□□ 0.68
PFN1-203ENST00000574872 MAP2K2P36507 400 aa19.32■□□□□ 0.68
PFN1-203ENST00000574872 PDE4BQ07343 736 aa19.32■□□□□ 0.68
PFN1-203ENST00000574872 SEPT2Q15019 361 aa19.32■□□□□ 0.68
PFN1-203ENST00000574872 CLEC10AQ8IUN9 316 aa19.32■□□□□ 0.68
PFN1-203ENST00000574872 LSG1Q9H089 658 aaKnown RBP19.32■□□□□ 0.68
PFN1-203ENST00000574872 NBPF3Q9H094 633 aa19.32■□□□□ 0.68
PFN1-203ENST00000574872 TOMM22Q9NS69 142 aa19.32■□□□□ 0.68
PFN1-203ENST00000574872 CTNNA3Q9UI47 895 aa19.32■□□□□ 0.68
PFN1-203ENST00000574872 ANAPC4Q9UJX5 808 aa19.32■□□□□ 0.68
PFN1-203ENST00000574872 TAOK2Q9UL54 1235 aa19.32■□□□□ 0.68
PFN1-203ENST00000574872 THSD7BQ9C0I4 1608 aa19.32■□□□□ 0.68
PFN1-203ENST00000574872 ZNF213O14771 459 aa19.31■□□□□ 0.68
PFN1-203ENST00000574872 GUCY1A2P33402 732 aa19.31■□□□□ 0.68
PFN1-203ENST00000574872 IMMTQ16891 758 aaKnown RBP19.31■□□□□ 0.68
PFN1-203ENST00000574872 RRP12Q5JTH9 1297 aaKnown RBP19.31■□□□□ 0.68
PFN1-203ENST00000574872 ZNF444Q8N0Y2 327 aaPredicted RBP19.31■□□□□ 0.68
PFN1-203ENST00000574872 ZNF287Q9HBT7 754 aa19.31■□□□□ 0.68
PFN1-203ENST00000574872 AFG3L2Q9Y4W6 797 aa19.31■□□□□ 0.68
PFN1-203ENST00000574872 U3KPZ7 1027 aaPredicted RBP19.31■□□□□ 0.68
PFN1-203ENST00000574872 CCL15-CCL14A0A0B4J2E2 113 aa19.3■□□□□ 0.68
PFN1-203ENST00000574872 MANSC4A6NHS7 340 aaPredicted RBP19.3■□□□□ 0.68
PFN1-203ENST00000574872 GTF2A2P52657 109 aa19.3■□□□□ 0.68
PFN1-203ENST00000574872 SPP2Q13103 211 aa19.3■□□□□ 0.68
PFN1-203ENST00000574872 SNAPC2Q13487 334 aa19.3■□□□□ 0.68
PFN1-203ENST00000574872 CCL15Q16663 113 aa19.3■□□□□ 0.68
PFN1-203ENST00000574872 FAM47AQ5JRC9 791 aa19.3■□□□□ 0.68
PFN1-203ENST00000574872 TMEM179Q6ZVK1 233 aa19.3■□□□□ 0.68
PFN1-203ENST00000574872 ZNF280CQ8ND82 737 aa19.3■□□□□ 0.68
PFN1-203ENST00000574872 MS4A4AQ96JQ5 239 aa19.3■□□□□ 0.68
PFN1-203ENST00000574872 CCDC17Q96LX7 622 aa19.3■□□□□ 0.68
PFN1-203ENST00000574872 GINM1Q9NU53 330 aa19.3■□□□□ 0.68
PFN1-203ENST00000574872 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.3■□□□□ 0.68
PFN1-203ENST00000574872 RBM8AQ9Y5S9 174 aaKnown RBP19.3■□□□□ 0.68
PFN1-203ENST00000574872 SREBF2Q12772 1141 aa19.29■□□□□ 0.68
PFN1-203ENST00000574872 BRI3BPQ8WY22 251 aa19.29■□□□□ 0.68
PFN1-203ENST00000574872 MAP4K1Q92918 833 aa19.29■□□□□ 0.68
PFN1-203ENST00000574872 AS3MTQ9HBK9 375 aa19.29■□□□□ 0.68
PFN1-203ENST00000574872 KCNH4Q9UQ05 1017 aa19.29■□□□□ 0.68
PFN1-203ENST00000574872 PHIPQ8WWQ0 1821 aa19.29■□□□□ 0.68
PFN1-203ENST00000574872 NEDD4P46934 1319 aa19.28■□□□□ 0.68
PFN1-203ENST00000574872 LAMA4Q16363 1823 aa19.28■□□□□ 0.68
PFN1-203ENST00000574872 CXCL11O14625 94 aa19.28■□□□□ 0.68
PFN1-203ENST00000574872 RANBP6O60518 1105 aaKnown RBP19.28■□□□□ 0.68
PFN1-203ENST00000574872 ICA1Q05084 483 aa19.28■□□□□ 0.68
PFN1-203ENST00000574872 DGKZQ13574 1117 aa19.28■□□□□ 0.68
PFN1-203ENST00000574872 MTMR2Q13614 643 aa19.28■□□□□ 0.68
PFN1-203ENST00000574872 AKNAD1Q5T1N1 836 aa19.28■□□□□ 0.68
PFN1-203ENST00000574872 MFSD6Q6ZSS7 791 aa19.28■□□□□ 0.68
PFN1-203ENST00000574872 JMYQ8N9B5 988 aa19.28■□□□□ 0.68
PFN1-203ENST00000574872 ACER1Q8TDN7 264 aa19.28■□□□□ 0.68
PFN1-203ENST00000574872 STAG1Q8WVM7 1258 aa19.28■□□□□ 0.68
PFN1-203ENST00000574872 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.28■□□□□ 0.68
PFN1-203ENST00000574872 TSPY3P0CV98 308 aa19.27■□□□□ 0.68
PFN1-203ENST00000574872 TSPY8P0CW00 308 aa19.27■□□□□ 0.68
PFN1-203ENST00000574872 CETPP11597 493 aa19.27■□□□□ 0.68
PFN1-203ENST00000574872 TFAP4Q01664 338 aa19.27■□□□□ 0.68
PFN1-203ENST00000574872 ATP2B2Q01814 1243 aa19.27■□□□□ 0.68
PFN1-203ENST00000574872 ZYXQ15942 572 aaKnown RBP19.27■□□□□ 0.68
PFN1-203ENST00000574872 GADL1Q6ZQY3 521 aa19.27■□□□□ 0.68
PFN1-203ENST00000574872 FEZ1Q99689 392 aa19.27■□□□□ 0.68
PFN1-203ENST00000574872 WDR18Q9BV38 432 aa19.27■□□□□ 0.68
PFN1-203ENST00000574872 TBC1D2Q9BYX2 928 aa19.27■□□□□ 0.68
PFN1-203ENST00000574872 RNF41Q9H4P4 317 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms