RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 MMS19Q96T76 1030 aa16.33■□□□□ 0.2
SMG6-215ENST00000574501 WWC3Q9ULE0 1092 aa16.33■□□□□ 0.2
SMG6-215ENST00000574501 TMEM2Q9UHN6 1383 aa16.32■□□□□ 0.2
SMG6-215ENST00000574501 EBAG9O00559 213 aa16.32■□□□□ 0.2
SMG6-215ENST00000574501 CD44P16070 742 aaKnown RBP16.32■□□□□ 0.2
SMG6-215ENST00000574501 PBX1P40424 430 aa16.32■□□□□ 0.2
SMG6-215ENST00000574501 IRAK1P51617 712 aa16.32■□□□□ 0.2
SMG6-215ENST00000574501 GSCP56915 257 aaPredicted RBP16.32■□□□□ 0.2
SMG6-215ENST00000574501 MYL10Q9BUA6 226 aa16.32■□□□□ 0.2
SMG6-215ENST00000574501 ZMYM6O95789 1325 aa16.32■□□□□ 0.2
SMG6-215ENST00000574501 AGPSO00116 658 aa16.31■□□□□ 0.2
SMG6-215ENST00000574501 MYBL2P10244 700 aa16.31■□□□□ 0.2
SMG6-215ENST00000574501 MAP2K2P36507 400 aa16.31■□□□□ 0.2
SMG6-215ENST00000574501 TRIM29Q14134 588 aa16.31■□□□□ 0.2
SMG6-215ENST00000574501 ATG9AQ7Z3C6 839 aa16.31■□□□□ 0.2
SMG6-215ENST00000574501 CNGA4Q8IV77 575 aa16.31■□□□□ 0.2
SMG6-215ENST00000574501 ANKRD20A12PQ8NF67 263 aa16.31■□□□□ 0.2
SMG6-215ENST00000574501 FAM76AQ8TAV0 307 aa16.31■□□□□ 0.2
SMG6-215ENST00000574501 CRACR2AQ9BSW2 395 aa16.31■□□□□ 0.2
SMG6-215ENST00000574501 FAM107BQ9H098 131 aa16.31■□□□□ 0.2
SMG6-215ENST00000574501 TFR2Q9UP52 801 aa16.31■□□□□ 0.2
SMG6-215ENST00000574501 ZNF213O14771 459 aa16.31■□□□□ 0.2
SMG6-215ENST00000574501 EP400NLQ6ZTU2 488 aa16.31■□□□□ 0.2
SMG6-215ENST00000574501 BCAS4Q8TDM0 211 aa16.31■□□□□ 0.2
SMG6-215ENST00000574501 NBPF3Q9H094 633 aa16.31■□□□□ 0.2
SMG6-215ENST00000574501 GOLGA6CA6NDK9 693 aa16.3■□□□□ 0.2
SMG6-215ENST00000574501 BTBD18B2RXH4 712 aa16.3■□□□□ 0.2
SMG6-215ENST00000574501 SHOX2O60902 331 aaPredicted RBP16.3■□□□□ 0.2
SMG6-215ENST00000574501 GOLGA6DP0CG33 693 aa16.3■□□□□ 0.2
SMG6-215ENST00000574501 AFMP43652 599 aa16.3■□□□□ 0.2
SMG6-215ENST00000574501 TOB1P50616 345 aaPredicted RBP16.3■□□□□ 0.2
SMG6-215ENST00000574501 MAP9Q49MG5 647 aa16.3■□□□□ 0.2
SMG6-215ENST00000574501 SPATA1Q5VX52 437 aa16.3■□□□□ 0.2
SMG6-215ENST00000574501 PUS7LQ9H0K6 701 aaKnown RBP16.3■□□□□ 0.2
SMG6-215ENST00000574501 GOLGA6AQ9NYA3 693 aa16.3■□□□□ 0.2
SMG6-215ENST00000574501 SAMM50Q9Y512 469 aa16.3■□□□□ 0.2
SMG6-215ENST00000574501 NWD2Q9ULI1 1742 aa16.3■□□□□ 0.2
SMG6-215ENST00000574501 SYNRGQ9UMZ2 1314 aa16.3■□□□□ 0.2
SMG6-215ENST00000574501 MYH8P13535 1937 aa16.3■□□□□ 0.2
SMG6-215ENST00000574501 ERCC5P28715 1186 aaPredicted RBP16.3■□□□□ 0.2
SMG6-215ENST00000574501 LRRC24Q50LG9 513 aa16.3■□□□□ 0.2
SMG6-215ENST00000574501 CYB5R4Q7L1T6 521 aa16.3■□□□□ 0.2
SMG6-215ENST00000574501 ZNF594Q96JF6 807 aaPredicted RBP16.3■□□□□ 0.2
SMG6-215ENST00000574501 NUP88Q99567 741 aaPredicted RBP16.3■□□□□ 0.2
SMG6-215ENST00000574501 ABHD10Q9NUJ1 306 aa16.3■□□□□ 0.2
SMG6-215ENST00000574501 FBXO2Q9UK22 296 aaPredicted RBP16.3■□□□□ 0.2
SMG6-215ENST00000574501 ACTN4O43707 911 aaKnown RBP16.29■□□□□ 0.2
SMG6-215ENST00000574501 RANBP6O60518 1105 aaKnown RBP16.29■□□□□ 0.2
SMG6-215ENST00000574501 APPP05067 770 aa16.29■□□□□ 0.2
SMG6-215ENST00000574501 IARSP41252 1262 aaKnown RBP16.29■□□□□ 0.2
SMG6-215ENST00000574501 FILIP1LQ4L180 1135 aa16.29■□□□□ 0.2
SMG6-215ENST00000574501 TRAPPC11Q7Z392 1133 aa16.29■□□□□ 0.2
SMG6-215ENST00000574501 TMTC1Q8IUR5 882 aa16.29■□□□□ 0.2
SMG6-215ENST00000574501 ANGEL1Q9UNK9 670 aaKnown RBP16.29■□□□□ 0.2
SMG6-215ENST00000574501 CDKL5O76039 1030 aa16.29■□□□□ 0.2
SMG6-215ENST00000574501 ATP1A1P05023 1023 aaKnown RBP16.29■□□□□ 0.2
SMG6-215ENST00000574501 CCDC172P0C7W6 258 aa16.29■□□□□ 0.2
SMG6-215ENST00000574501 ELOA2Q8IYF1 753 aaPredicted RBP16.29■□□□□ 0.2
SMG6-215ENST00000574501 TRIML1Q8N9V2 468 aa16.29■□□□□ 0.2
SMG6-215ENST00000574501 CHP1Q99653 195 aa16.29■□□□□ 0.2
SMG6-215ENST00000574501 SELENOOQ9BVL4 669 aa16.29■□□□□ 0.2
SMG6-215ENST00000574501 SLC26A6Q9BXS9 759 aa16.29■□□□□ 0.2
SMG6-215ENST00000574501 KCNJ14Q9UNX9 436 aa16.29■□□□□ 0.2
SMG6-215ENST00000574501 MARF1Q9Y4F3 1742 aaKnown RBP16.29■□□□□ 0.2
SMG6-215ENST00000574501 UBN2Q6ZU65 1347 aa16.29■□□□□ 0.2
SMG6-215ENST00000574501 INPP5BP32019 993 aa16.28■□□□□ 0.2
SMG6-215ENST00000574501 AMOTQ4VCS5 1084 aa16.28■□□□□ 0.2
SMG6-215ENST00000574501 NOSTRINQ8IVI9 506 aa16.28■□□□□ 0.2
SMG6-215ENST00000574501 THEMISQ8N1K5 641 aaPredicted RBP16.28■□□□□ 0.2
SMG6-215ENST00000574501 VPS16Q9H269 839 aa16.28■□□□□ 0.2
SMG6-215ENST00000574501 MYO1AQ9UBC5 1043 aa16.28■□□□□ 0.2
SMG6-215ENST00000574501 C4AP0C0L4 1744 aa16.28■□□□□ 0.2
SMG6-215ENST00000574501 C4BP0C0L5 1744 aa16.28■□□□□ 0.2
SMG6-215ENST00000574501 CPDO75976 1380 aa16.28■□□□□ 0.2
SMG6-215ENST00000574501 PTPREP23469 700 aa16.28■□□□□ 0.2
SMG6-215ENST00000574501 APOA5Q6Q788 366 aa16.28■□□□□ 0.2
SMG6-215ENST00000574501 CYP26C1Q6V0L0 522 aa16.28■□□□□ 0.2
SMG6-215ENST00000574501 CAPS2Q9BXY5 557 aa16.28■□□□□ 0.2
SMG6-215ENST00000574501 PCDHB6Q9Y5E3 794 aa16.28■□□□□ 0.2
SMG6-215ENST00000574501 RGPD2P0DJD1 1756 aa16.28■□□□□ 0.2
SMG6-215ENST00000574501 LMO7Q8WWI1 1683 aa16.27■□□□□ 0.2
SMG6-215ENST00000574501 GOLGA6BA6NDN3 693 aa16.27■□□□□ 0.2
SMG6-215ENST00000574501 GNGT1P63211 74 aa16.27■□□□□ 0.2
SMG6-215ENST00000574501 CDKAL1Q5VV42 579 aa16.27■□□□□ 0.2
SMG6-215ENST00000574501 CPLX2Q6PUV4 134 aaKnown RBP16.27■□□□□ 0.2
SMG6-215ENST00000574501 REXO2Q9Y3B8 237 aaKnown RBP16.27■□□□□ 0.2
SMG6-215ENST00000574501 GUCY1A2P33402 732 aa16.27■□□□□ 0.19
SMG6-215ENST00000574501 CUL4BQ13620 913 aa16.27■□□□□ 0.19
SMG6-215ENST00000574501 ZNF790Q6PG37 636 aa16.27■□□□□ 0.19
SMG6-215ENST00000574501 NFXL1Q6ZNB6 911 aa16.27■□□□□ 0.19
SMG6-215ENST00000574501 CCDC51Q96ER9 411 aa16.27■□□□□ 0.19
SMG6-215ENST00000574501 CTAGE1Q96RT6 745 aa16.27■□□□□ 0.19
SMG6-215ENST00000574501 CSRNP2Q9H175 543 aa16.27■□□□□ 0.19
SMG6-215ENST00000574501 CEP83Q9Y592 693 aa16.27■□□□□ 0.19
SMG6-215ENST00000574501 SAR1BQ9Y6B6 198 aa16.27■□□□□ 0.19
SMG6-215ENST00000574501 N4BP3O15049 544 aa16.26■□□□□ 0.19
SMG6-215ENST00000574501 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
SMG6-215ENST00000574501 A1BGP04217 495 aa16.26■□□□□ 0.19
SMG6-215ENST00000574501 ATP6V1AP38606 617 aa16.26■□□□□ 0.19
SMG6-215ENST00000574501 NTRK3Q16288 839 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms