RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 PLCD1P51178 756 aa31.52■■■□□ 2.64
NPLOC4-215ENST00000574095 SH3D19Q5HYK7 790 aa31.52■■■□□ 2.64
NPLOC4-215ENST00000574095 EHD4Q9H223 541 aa31.52■■■□□ 2.64
NPLOC4-215ENST00000574095 GINM1Q9NU53 330 aa31.52■■■□□ 2.64
NPLOC4-215ENST00000574095 MGAMO43451 1857 aa31.52■■■□□ 2.64
NPLOC4-215ENST00000574095 POTEFA5A3E0 1075 aa31.51■■■□□ 2.63
NPLOC4-215ENST00000574095 CHGBP05060 677 aa31.51■■■□□ 2.63
NPLOC4-215ENST00000574095 POLR3DP05423 398 aaPredicted RBP31.51■■■□□ 2.63
NPLOC4-215ENST00000574095 OSBPP22059 807 aa31.51■■■□□ 2.63
NPLOC4-215ENST00000574095 PRMT2P55345 433 aa31.51■■■□□ 2.63
NPLOC4-215ENST00000574095 MTMR2Q13614 643 aa31.51■■■□□ 2.63
NPLOC4-215ENST00000574095 SDR42E1Q8WUS8 393 aa31.51■■■□□ 2.63
NPLOC4-215ENST00000574095 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.51■■■□□ 2.637e-8■■■■■ 37.3
NPLOC4-215ENST00000574095 ARMT1Q9H993 441 aa31.51■■■□□ 2.63
NPLOC4-215ENST00000574095 SRRDQ9UH36 339 aa31.51■■■□□ 2.63
NPLOC4-215ENST00000574095 HOXD10P28358 340 aa31.5■■■□□ 2.63
NPLOC4-215ENST00000574095 BACE1P56817 501 aa31.5■■■□□ 2.63
NPLOC4-215ENST00000574095 TATDN1Q6P1N9 297 aa31.5■■■□□ 2.63
NPLOC4-215ENST00000574095 NBPF11Q86T75 865 aa31.5■■■□□ 2.63
NPLOC4-215ENST00000574095 ZNF333Q96JL9 665 aa31.5■■■□□ 2.63
NPLOC4-215ENST00000574095 ECHDC1Q9NTX5 307 aa31.5■■■□□ 2.63
NPLOC4-215ENST00000574095 PNMA3Q9UL41 463 aa31.5■■■□□ 2.63
NPLOC4-215ENST00000574095 DDX60LQ5H9U9 1706 aaKnown RBP31.49■■■□□ 2.63
NPLOC4-215ENST00000574095 MYH7P12883 1935 aa31.49■■■□□ 2.63
NPLOC4-215ENST00000574095 GH2P01242 217 aa31.49■■■□□ 2.63
NPLOC4-215ENST00000574095 FCGRTP55899 365 aa31.49■■■□□ 2.63
NPLOC4-215ENST00000574095 SH3TC2Q8TF17 1288 aa31.49■■■□□ 2.63
NPLOC4-215ENST00000574095 MCM9Q9NXL9 1143 aa31.49■■■□□ 2.63
NPLOC4-215ENST00000574095 PABPC4Q13310 644 aaKnown RBP eCLIP31.48■■■□□ 2.63
NPLOC4-215ENST00000574095 ANKRD13CQ8N6S4 541 aa31.48■■■□□ 2.63
NPLOC4-215ENST00000574095 CRBNQ96SW2 442 aa31.48■■■□□ 2.63
NPLOC4-215ENST00000574095 MYPNQ86TC9 1320 aa31.48■■■□□ 2.63
NPLOC4-215ENST00000574095 USP17L10C9JJH3 530 aa31.47■■■□□ 2.63
NPLOC4-215ENST00000574095 MBD4O95243 580 aa31.47■■■□□ 2.63
NPLOC4-215ENST00000574095 MYCP01106 439 aaPredicted RBP31.47■■■□□ 2.63
NPLOC4-215ENST00000574095 EVX2Q03828 476 aa31.47■■■□□ 2.63
NPLOC4-215ENST00000574095 CERKLQ49MI3 558 aaPredicted RBP31.47■■■□□ 2.63
NPLOC4-215ENST00000574095 DCP1AQ9NPI6 582 aaPredicted RBP31.47■■■□□ 2.63
NPLOC4-215ENST00000574095 TMOD4Q9NZQ9 345 aa31.47■■■□□ 2.63
NPLOC4-215ENST00000574095 PRKAB2O43741 272 aa31.46■■■□□ 2.63
NPLOC4-215ENST00000574095 TSHZ3Q63HK5 1081 aa31.46■■■□□ 2.63
NPLOC4-215ENST00000574095 ASCC2Q9H1I8 757 aaPredicted RBP31.46■■■□□ 2.63
NPLOC4-215ENST00000574095 C19orf81C9J6K1 198 aa31.45■■■□□ 2.63
NPLOC4-215ENST00000574095 SHMT1P34896 483 aa31.45■■■□□ 2.63
NPLOC4-215ENST00000574095 UBE3CQ15386 1083 aa31.45■■■□□ 2.63
NPLOC4-215ENST00000574095 RAET1EQ8TD07 263 aa31.45■■■□□ 2.63
NPLOC4-215ENST00000574095 TMEM106CQ9BVX2 250 aa31.45■■■□□ 2.63
NPLOC4-215ENST00000574095 RBBP6Q7Z6E9 1792 aaKnown RBP31.44■■■□□ 2.62
NPLOC4-215ENST00000574095 PRKCZQ05513 592 aa31.44■■■□□ 2.62
NPLOC4-215ENST00000574095 ABCB5Q2M3G0 1257 aa31.44■■■□□ 2.62
NPLOC4-215ENST00000574095 GPATCH3Q96I76 525 aa31.44■■■□□ 2.62
NPLOC4-215ENST00000574095 GABRQQ9UN88 632 aa31.44■■■□□ 2.62
NPLOC4-215ENST00000574095 CYP2D6P10635 497 aa31.43■■■□□ 2.62
NPLOC4-215ENST00000574095 GABPAQ06546 454 aa31.43■■■□□ 2.62
NPLOC4-215ENST00000574095 RAB3GAP1Q15042 981 aa31.43■■■□□ 2.62
NPLOC4-215ENST00000574095 ZSCAN25Q6NSZ9 544 aa31.43■■■□□ 2.62
NPLOC4-215ENST00000574095 KIAA0100Q14667 2235 aaKnown RBP31.43■■■□□ 2.62
NPLOC4-215ENST00000574095 BAZ2AQ9UIF9 1905 aaKnown RBP31.42■■■□□ 2.62
NPLOC4-215ENST00000574095 EN2P19622 333 aaPredicted RBP31.42■■■□□ 2.62
NPLOC4-215ENST00000574095 EMILIN3Q9NT22 766 aa31.42■■■□□ 2.62
NPLOC4-215ENST00000574095 TNPO2O14787 897 aaKnown RBP31.41■■■□□ 2.62
NPLOC4-215ENST00000574095 GCLCP48506 637 aaPredicted RBP31.41■■■□□ 2.62
NPLOC4-215ENST00000574095 FAM110CQ1W6H9 321 aa31.41■■■□□ 2.62
NPLOC4-215ENST00000574095 PUS7LQ9H0K6 701 aaKnown RBP31.41■■■□□ 2.62
NPLOC4-215ENST00000574095 CABP5Q9NP86 173 aa31.41■■■□□ 2.62
NPLOC4-215ENST00000574095 HOXA7P31268 230 aaPredicted RBP31.4■■■□□ 2.62
NPLOC4-215ENST00000574095 IRX3P78415 501 aaPredicted RBP31.4■■■□□ 2.62
NPLOC4-215ENST00000574095 USP17L2Q6R6M4 530 aa31.4■■■□□ 2.62
NPLOC4-215ENST00000574095 ATP8A2Q9NTI2 1148 aa31.4■■■□□ 2.62
NPLOC4-215ENST00000574095 BRCA2P51587 3418 aa31.4■■■□□ 2.62
NPLOC4-215ENST00000574095 GRK4P32298 578 aa31.39■■■□□ 2.62
NPLOC4-215ENST00000574095 ZYXQ15942 572 aaKnown RBP31.39■■■□□ 2.62
NPLOC4-215ENST00000574095 P2RX7Q99572 595 aaKnown RBP31.39■■■□□ 2.62
NPLOC4-215ENST00000574095 DOCK3Q8IZD9 2030 aa31.39■■■□□ 2.62
NPLOC4-215ENST00000574095 KBTBD3Q8NAB2 608 aa31.38■■■□□ 2.61
NPLOC4-215ENST00000574095 ACER1Q8TDN7 264 aa31.38■■■□□ 2.61
NPLOC4-215ENST00000574095 DYNLL2Q96FJ2 89 aa31.38■■■□□ 2.61
NPLOC4-215ENST00000574095 FEZ1Q99689 392 aa31.38■■■□□ 2.61
NPLOC4-215ENST00000574095 SLC4A4Q9Y6R1 1079 aa31.38■■■□□ 2.61
NPLOC4-215ENST00000574095 GUCY1A2P33402 732 aa31.37■■■□□ 2.61
NPLOC4-215ENST00000574095 FLT3LGP49771 235 aa31.37■■■□□ 2.61
NPLOC4-215ENST00000574095 MTFR1Q15390 333 aa31.37■■■□□ 2.61
NPLOC4-215ENST00000574095 SLC44A5Q8NCS7 719 aa31.37■■■□□ 2.61
NPLOC4-215ENST00000574095 OTUD7AQ8TE49 926 aaPredicted RBP31.37■■■□□ 2.61
NPLOC4-215ENST00000574095 CYP2D7A0A087X1C5 515 aa31.36■■■□□ 2.61
NPLOC4-215ENST00000574095 MPHOSPH10O00566 681 aaKnown RBP31.36■■■□□ 2.61
NPLOC4-215ENST00000574095 SEPT2Q15019 361 aa31.36■■■□□ 2.61
NPLOC4-215ENST00000574095 SMIM22K7EJ46 135 aa31.35■■■□□ 2.61
NPLOC4-215ENST00000574095 PEX10O60683 326 aa31.35■■■□□ 2.61
NPLOC4-215ENST00000574095 HERVK_113P62684 666 aa31.35■■■□□ 2.61
NPLOC4-215ENST00000574095 COA7Q96BR5 231 aa31.35■■■□□ 2.61
NPLOC4-215ENST00000574095 BIN2Q9UBW5 565 aaPredicted RBP31.35■■■□□ 2.61
NPLOC4-215ENST00000574095 MYH8P13535 1937 aa31.35■■■□□ 2.61
NPLOC4-215ENST00000574095 USP17L12C9JPN9 530 aa31.34■■■□□ 2.61
NPLOC4-215ENST00000574095 USP17L21D6R901 530 aa31.34■■■□□ 2.61
NPLOC4-215ENST00000574095 C12orf60Q5U649 245 aa31.34■■■□□ 2.61
NPLOC4-215ENST00000574095 C12orf42Q96LP6 360 aa31.34■■■□□ 2.61
NPLOC4-215ENST00000574095 SWAP70Q9UH65 585 aa31.34■■■□□ 2.61
NPLOC4-215ENST00000574095 PDE4DIPQ5VU43 2346 aa31.33■■■□□ 2.61
NPLOC4-215ENST00000574095 TTC41PQ6P2S7 1318 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms