RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 MAP3K10Q02779 954 aa12.15□□□□□ -0.46
RPA1-206ENST00000573994 RRP1BQ14684 758 aaKnown RBP12.15□□□□□ -0.46
RPA1-206ENST00000573994 TMED8Q6PL24 325 aaPredicted RBP12.15□□□□□ -0.46
RPA1-206ENST00000573994 MARVELD3Q96A59 401 aa12.15□□□□□ -0.46
RPA1-206ENST00000573994 EFCC1Q9HA90 598 aa12.15□□□□□ -0.46
RPA1-206ENST00000573994 AK9Q5TCS8 1911 aa12.15□□□□□ -0.46
RPA1-206ENST00000573994 CTNND1O60716 968 aaKnown RBP12.14□□□□□ -0.47
RPA1-206ENST00000573994 RRP1P56182 461 aaKnown RBP12.14□□□□□ -0.47
RPA1-206ENST00000573994 MAP3K12Q12852 859 aa12.14□□□□□ -0.47
RPA1-206ENST00000573994 GADL1Q6ZQY3 521 aa12.14□□□□□ -0.47
RPA1-206ENST00000573994 ANKRD23Q86SG2 305 aa12.14□□□□□ -0.47
RPA1-206ENST00000573994 ARHGAP39Q9C0H5 1083 aa12.14□□□□□ -0.47
RPA1-206ENST00000573994 DNAJC18Q9H819 358 aa12.14□□□□□ -0.47
RPA1-206ENST00000573994 ZCCHC17Q9NP64 241 aaKnown RBP12.14□□□□□ -0.47
RPA1-206ENST00000573994 CPA4Q9UI42 421 aa12.14□□□□□ -0.47
RPA1-206ENST00000573994 PALD1Q9ULE6 856 aa12.14□□□□□ -0.47
RPA1-206ENST00000573994 DOCK1Q14185 1865 aa12.13□□□□□ -0.47
RPA1-206ENST00000573994 A0A0G2JLL6 359 aaPredicted RBP12.13□□□□□ -0.47
RPA1-206ENST00000573994 CXCL11O14625 94 aa12.13□□□□□ -0.47
RPA1-206ENST00000573994 TBC1D12O60347 775 aa12.13□□□□□ -0.47
RPA1-206ENST00000573994 TLR2O60603 784 aa12.13□□□□□ -0.47
RPA1-206ENST00000573994 CYP2C8P10632 490 aa12.13□□□□□ -0.47
RPA1-206ENST00000573994 PDE6AP16499 860 aa12.13□□□□□ -0.47
RPA1-206ENST00000573994 USP5P45974 858 aa12.13□□□□□ -0.47
RPA1-206ENST00000573994 SHROOM1Q2M3G4 852 aaPredicted RBP12.13□□□□□ -0.47
RPA1-206ENST00000573994 GPAT2Q6NUI2 795 aa12.13□□□□□ -0.47
RPA1-206ENST00000573994 PRRT2Q7Z6L0 340 aaPredicted RBP12.13□□□□□ -0.47
RPA1-206ENST00000573994 FBXO22Q8NEZ5 403 aa12.13□□□□□ -0.47
RPA1-206ENST00000573994 PARK7Q99497 189 aaKnown RBP12.13□□□□□ -0.47
RPA1-206ENST00000573994 TRIM34Q9BYJ4 488 aa12.13□□□□□ -0.47
RPA1-206ENST00000573994 LRRCC1Q9C099 1032 aa12.13□□□□□ -0.47
RPA1-206ENST00000573994 BOLA2Q9H3K6 86 aa12.13□□□□□ -0.47
RPA1-206ENST00000573994 AFG3L2Q9Y4W6 797 aa12.13□□□□□ -0.47
RPA1-206ENST00000573994 CENPFP49454 3210 aa12.13□□□□□ -0.47
RPA1-206ENST00000573994 ADGRA2Q96PE1 1338 aa12.12□□□□□ -0.47
RPA1-206ENST00000573994 SIPA1L1O43166 1804 aa12.12□□□□□ -0.47
RPA1-206ENST00000573994 GDF11O95390 407 aa12.12□□□□□ -0.47
RPA1-206ENST00000573994 SLFNL1Q499Z3 407 aa12.12□□□□□ -0.47
RPA1-206ENST00000573994 SLC9C2Q5TAH2 1124 aa12.12□□□□□ -0.47
RPA1-206ENST00000573994 CERS3Q8IU89 383 aa12.12□□□□□ -0.47
RPA1-206ENST00000573994 CRACR2BQ8N4Y2 399 aaPredicted RBP12.12□□□□□ -0.47
RPA1-206ENST00000573994 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.12□□□□□ -0.47
RPA1-206ENST00000573994 MFRPQ9BY79 579 aa12.12□□□□□ -0.47
RPA1-206ENST00000573994 DHX36Q9H2U1 1008 aaKnown RBP12.12□□□□□ -0.47
RPA1-206ENST00000573994 PI4KBQ9UBF8 816 aa12.12□□□□□ -0.47
RPA1-206ENST00000573994 HERC5Q9UII4 1024 aaKnown RBP12.12□□□□□ -0.47
RPA1-206ENST00000573994 PTPN22Q9Y2R2 807 aa12.12□□□□□ -0.47
RPA1-206ENST00000573994 MYO5AQ9Y4I1 1855 aaKnown RBP12.12□□□□□ -0.47
RPA1-206ENST00000573994 ZNF532Q9HCE3 1301 aa12.11□□□□□ -0.47
RPA1-206ENST00000573994 MAGEB6P1A0A0J9YX57 407 aa12.11□□□□□ -0.47
RPA1-206ENST00000573994 CHGBP05060 677 aa12.11□□□□□ -0.47
RPA1-206ENST00000573994 HLA-DOAP06340 250 aa12.11□□□□□ -0.47
RPA1-206ENST00000573994 CAP2P40123 477 aa12.11□□□□□ -0.47
RPA1-206ENST00000573994 JAG1P78504 1218 aa12.11□□□□□ -0.47
RPA1-206ENST00000573994 LACTBP83111 547 aaPredicted RBP12.11□□□□□ -0.47
RPA1-206ENST00000573994 MLLT1Q03111 559 aaPredicted RBP12.11□□□□□ -0.47
RPA1-206ENST00000573994 TTF1Q15361 905 aaPredicted RBP12.11□□□□□ -0.47
RPA1-206ENST00000573994 TREML2Q5T2D2 321 aa12.11□□□□□ -0.47
RPA1-206ENST00000573994 TSHZ3Q63HK5 1081 aa12.11□□□□□ -0.47
RPA1-206ENST00000573994 RIOK1Q9BRS2 568 aaKnown RBP12.11□□□□□ -0.47
RPA1-206ENST00000573994 ZSWIM6Q9HCJ5 1215 aa12.11□□□□□ -0.47
RPA1-206ENST00000573994 PAG1Q9NWQ8 432 aa12.11□□□□□ -0.47
RPA1-206ENST00000573994 PTCH2Q9Y6C5 1203 aa12.11□□□□□ -0.47
RPA1-206ENST00000573994 ZSWIM8A7E2V4 1837 aa12.11□□□□□ -0.47
RPA1-206ENST00000573994 CTGFP29279 349 aa12.1□□□□□ -0.47
RPA1-206ENST00000573994 HMGCS2P54868 508 aa12.1□□□□□ -0.47
RPA1-206ENST00000573994 SPP2Q13103 211 aa12.1□□□□□ -0.47
RPA1-206ENST00000573994 C17orf99Q6UX52 265 aa12.1□□□□□ -0.47
RPA1-206ENST00000573994 FASTKD5Q7L8L6 764 aaKnown RBP12.1□□□□□ -0.47
RPA1-206ENST00000573994 LCORLQ8N3X6 602 aa12.1□□□□□ -0.47
RPA1-206ENST00000573994 CRBNQ96SW2 442 aa12.1□□□□□ -0.47
RPA1-206ENST00000573994 PCDHB15Q9Y5E8 787 aa12.1□□□□□ -0.47
RPA1-206ENST00000573994 BRCA2P51587 3418 aa12.1□□□□□ -0.47
RPA1-206ENST00000573994 TCRBV5S4A2TA0A5A2 114 aa12.09□□□□□ -0.47
RPA1-206ENST00000573994 USP17L5A8MUK1 530 aa12.09□□□□□ -0.47
RPA1-206ENST00000573994 ATP5JP18859 108 aa12.09□□□□□ -0.47
RPA1-206ENST00000573994 RGS19P49795 217 aa12.09□□□□□ -0.47
RPA1-206ENST00000573994 MTMR2Q13614 643 aa12.09□□□□□ -0.47
RPA1-206ENST00000573994 KIF22Q14807 665 aa12.09□□□□□ -0.47
RPA1-206ENST00000573994 ARHGEF6Q15052 776 aa12.09□□□□□ -0.47
RPA1-206ENST00000573994 ZNF280CQ8ND82 737 aa12.09□□□□□ -0.47
RPA1-206ENST00000573994 HAUS7Q99871 368 aa12.09□□□□□ -0.47
RPA1-206ENST00000573994 ZBTB21Q9ULJ3 1066 aa12.09□□□□□ -0.47
RPA1-206ENST00000573994 AGTPBP1Q9UPW5 1226 aa12.09□□□□□ -0.47
RPA1-206ENST00000573994 MBD4O95243 580 aa12.08□□□□□ -0.48
RPA1-206ENST00000573994 MYCP01106 439 aaPredicted RBP12.08□□□□□ -0.48
RPA1-206ENST00000573994 HOXB3P14651 431 aaPredicted RBP12.08□□□□□ -0.48
RPA1-206ENST00000573994 METTL16Q86W50 562 aaKnown RBP12.08□□□□□ -0.48
RPA1-206ENST00000573994 SMCR8Q8TEV9 937 aaPredicted RBP12.08□□□□□ -0.48
RPA1-206ENST00000573994 SDR42E1Q8WUS8 393 aa12.08□□□□□ -0.48
RPA1-206ENST00000573994 TRIM47Q96LD4 638 aa12.08□□□□□ -0.48
RPA1-206ENST00000573994 CRNKL1Q9BZJ0 848 aaKnown RBP12.08□□□□□ -0.48
RPA1-206ENST00000573994 DCTPP1Q9H773 170 aa12.08□□□□□ -0.48
RPA1-206ENST00000573994 ARMT1Q9H993 441 aa12.08□□□□□ -0.48
RPA1-206ENST00000573994 FOCADQ5VW36 1801 aa12.08□□□□□ -0.48
RPA1-206ENST00000573994 DDX60LQ5H9U9 1706 aaKnown RBP12.08□□□□□ -0.48
RPA1-206ENST00000573994 CDK5RAP2Q96SN8 1893 aa12.08□□□□□ -0.48
RPA1-206ENST00000573994 PHIPQ8WWQ0 1821 aa12.07□□□□□ -0.48
RPA1-206ENST00000573994 FMNL1O95466 1100 aaPredicted RBP12.07□□□□□ -0.48
RPA1-206ENST00000573994 GH2P01242 217 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms