RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 PCDHGB7Q9Y5F8 929 aa7.83□□□□□ -1.16
CDC27-215ENST00000573550 ROBO2Q9HCK4 1378 aa7.83□□□□□ -1.16
CDC27-215ENST00000573550 MYO15BQ96JP2 1530 aa7.83□□□□□ -1.16
CDC27-215ENST00000573550 SLITRK5O94991 958 aa7.82□□□□□ -1.16
CDC27-215ENST00000573550 EOMESO95936 686 aa7.82□□□□□ -1.16
CDC27-215ENST00000573550 CST3P01034 146 aaPredicted RBP7.82□□□□□ -1.16
CDC27-215ENST00000573550 TMEM201Q5SNT2 666 aa7.82□□□□□ -1.16
CDC27-215ENST00000573550 USP48Q86UV5 1035 aa7.82□□□□□ -1.16
CDC27-215ENST00000573550 ZNF428Q96B54 188 aa7.82□□□□□ -1.16
CDC27-215ENST00000573550 TMEM87BQ96K49 555 aa7.82□□□□□ -1.16
CDC27-215ENST00000573550 HEXIM2Q96MH2 286 aaKnown RBP7.82□□□□□ -1.16
CDC27-215ENST00000573550 UBP1Q9NZI7 540 aa7.82□□□□□ -1.16
CDC27-215ENST00000573550 ZC3H7BQ9UGR2 993 aaKnown RBP7.82□□□□□ -1.16
CDC27-215ENST00000573550 TLR3O15455 904 aaKnown RBP7.81□□□□□ -1.16
CDC27-215ENST00000573550 GRIN3BO60391 1043 aa7.81□□□□□ -1.16
CDC27-215ENST00000573550 RACK1P63244 317 aaKnown RBP7.81□□□□□ -1.16
CDC27-215ENST00000573550 SLC6A19Q695T7 634 aa7.81□□□□□ -1.16
CDC27-215ENST00000573550 MCATQ8IVS2 390 aaKnown RBP7.81□□□□□ -1.16
CDC27-215ENST00000573550 FAM181AQ8N9Y4 354 aa7.81□□□□□ -1.16
CDC27-215ENST00000573550 MFSD2AQ8NA29 543 aa7.81□□□□□ -1.16
CDC27-215ENST00000573550 MIPEPQ99797 713 aa7.81□□□□□ -1.16
CDC27-215ENST00000573550 DPH2Q9BQC3 489 aaPredicted RBP7.81□□□□□ -1.16
CDC27-215ENST00000573550 ADAMTS4O75173 837 aa7.8□□□□□ -1.16
CDC27-215ENST00000573550 HTR3BO95264 441 aa7.8□□□□□ -1.16
CDC27-215ENST00000573550 PLCG1P19174 1290 aa7.8□□□□□ -1.16
CDC27-215ENST00000573550 HDLBPQ00341 1268 aaKnown RBP7.8□□□□□ -1.16
CDC27-215ENST00000573550 CWF19L2Q2TBE0 894 aaKnown RBP7.8□□□□□ -1.16
CDC27-215ENST00000573550 KIAA0825Q8IV33 1275 aa7.8□□□□□ -1.16
CDC27-215ENST00000573550 EAF1Q96JC9 268 aaPredicted RBP7.8□□□□□ -1.16
CDC27-215ENST00000573550 SPON2Q9BUD6 331 aa7.8□□□□□ -1.16
CDC27-215ENST00000573550 REV1Q9UBZ9 1251 aa7.8□□□□□ -1.16
CDC27-215ENST00000573550 PRNPP04156 253 aa7.79□□□□□ -1.16
CDC27-215ENST00000573550 OXCT1P55809 520 aa7.79□□□□□ -1.16
CDC27-215ENST00000573550 RIN3Q8TB24 985 aa7.79□□□□□ -1.16
CDC27-215ENST00000573550 XAGE3Q8WTP9 111 aa7.79□□□□□ -1.16
CDC27-215ENST00000573550 NT5C1AQ9BXI3 368 aa7.79□□□□□ -1.16
CDC27-215ENST00000573550 MKNK2Q9HBH9 465 aa7.79□□□□□ -1.16
CDC27-215ENST00000573550 BRMS1Q9HCU9 246 aa7.79□□□□□ -1.16
CDC27-215ENST00000573550 DDX41Q9UJV9 622 aaKnown RBP7.79□□□□□ -1.16
CDC27-215ENST00000573550 SHROOM4Q9ULL8 1493 aa7.79□□□□□ -1.16
CDC27-215ENST00000573550 IGF2BP3O00425 579 aaKnown RBP eCLIP7.78□□□□□ -1.16
CDC27-215ENST00000573550 APOBRQ0VD83 1088 aa7.78□□□□□ -1.16
CDC27-215ENST00000573550 LETMD1Q6P1Q0 360 aa7.78□□□□□ -1.16
CDC27-215ENST00000573550 NFXL1Q6ZNB6 911 aa7.78□□□□□ -1.16
CDC27-215ENST00000573550 PLD6Q8N2A8 252 aaKnown RBP7.78□□□□□ -1.16
CDC27-215ENST00000573550 GTF2IRD1Q9UHL9 959 aa7.78□□□□□ -1.16
CDC27-215ENST00000573550 MAPK8IP1Q9UQF2 711 aa7.78□□□□□ -1.16
CDC27-215ENST00000573550 CNTNAP4Q9C0A0 1308 aa7.78□□□□□ -1.16
CDC27-215ENST00000573550 DNAJA2O60884 412 aa7.77□□□□□ -1.17
CDC27-215ENST00000573550 CEACAM5P06731 702 aa7.77□□□□□ -1.17
CDC27-215ENST00000573550 SLITRK4Q8IW52 837 aa7.77□□□□□ -1.17
CDC27-215ENST00000573550 SLFN12Q8IYM2 578 aa7.77□□□□□ -1.17
CDC27-215ENST00000573550 PRDM5Q9NQX1 630 aaPredicted RBP7.77□□□□□ -1.17
CDC27-215ENST00000573550 BSDC1Q9NW68 430 aaPredicted RBP7.77□□□□□ -1.17
CDC27-215ENST00000573550 CCDC39Q9UFE4 941 aa7.77□□□□□ -1.17
CDC27-215ENST00000573550 UPK3BL1B0FP48 263 aa7.76□□□□□ -1.17
CDC27-215ENST00000573550 UPK3BL2E5RIL1 263 aa7.76□□□□□ -1.17
CDC27-215ENST00000573550 ATE1O95260 518 aa7.76□□□□□ -1.17
CDC27-215ENST00000573550 SEZ6Q53EL9 994 aa7.76□□□□□ -1.17
CDC27-215ENST00000573550 XP32Q5T750 250 aa7.76□□□□□ -1.17
CDC27-215ENST00000573550 NT5DC4Q86YG4 428 aa7.76□□□□□ -1.17
CDC27-215ENST00000573550 FAM13CQ8NE31 585 aa7.76□□□□□ -1.17
CDC27-215ENST00000573550 NETO1Q8TDF5 533 aa7.76□□□□□ -1.17
CDC27-215ENST00000573550 EHMT1Q9H9B1 1298 aa7.76□□□□□ -1.17
CDC27-215ENST00000573550 PLAGL2Q9UPG8 496 aa7.76□□□□□ -1.17
CDC27-215ENST00000573550 PCDHB14Q9Y5E9 798 aa7.76□□□□□ -1.17
CDC27-215ENST00000573550 RBAK-RBAKDNI3L0D1 243 aa7.75□□□□□ -1.17
CDC27-215ENST00000573550 YARSP54577 528 aaKnown RBP7.75□□□□□ -1.17
CDC27-215ENST00000573550 C9orf131Q5VYM1 1079 aa7.75□□□□□ -1.17
CDC27-215ENST00000573550 C22orf34Q6ZV56 151 aa7.75□□□□□ -1.17
CDC27-215ENST00000573550 VSIG10LQ86VR7 867 aa7.75□□□□□ -1.17
CDC27-215ENST00000573550 WFDC3Q8IUB2 231 aa7.75□□□□□ -1.17
CDC27-215ENST00000573550 REXO1Q8N1G1 1221 aaKnown RBP7.75□□□□□ -1.17
CDC27-215ENST00000573550 DNAJB8Q8NHS0 232 aa7.75□□□□□ -1.17
CDC27-215ENST00000573550 PPP1R13LQ8WUF5 828 aa7.75□□□□□ -1.17
CDC27-215ENST00000573550 CYB5D2Q8WUJ1 264 aa7.75□□□□□ -1.17
CDC27-215ENST00000573550 TNKS2Q9H2K2 1166 aa7.75□□□□□ -1.17
CDC27-215ENST00000573550 KLHL3Q9UH77 587 aa7.75□□□□□ -1.17
CDC27-215ENST00000573550 PRR33A8MZF0 331 aa7.74□□□□□ -1.17
CDC27-215ENST00000573550 CHURC1-FNTBB4DL54 471 aa7.74□□□□□ -1.17
CDC27-215ENST00000573550 ZNF865P0CJ78 1059 aaPredicted RBP7.74□□□□□ -1.17
CDC27-215ENST00000573550 ITIH2P19823 946 aa7.74□□□□□ -1.17
CDC27-215ENST00000573550 CLCQ05315 142 aa7.74□□□□□ -1.17
CDC27-215ENST00000573550 RAD51AP2Q09MP3 1159 aa7.74□□□□□ -1.17
CDC27-215ENST00000573550 IFI16Q16666 785 aaKnown RBP7.74□□□□□ -1.17
CDC27-215ENST00000573550 ZNF746Q6NUN9 644 aaPredicted RBP7.74□□□□□ -1.17
CDC27-215ENST00000573550 ARHGAP27Q6ZUM4 889 aa7.74□□□□□ -1.17
CDC27-215ENST00000573550 CDH24Q86UP0 819 aa7.74□□□□□ -1.17
CDC27-215ENST00000573550 SPACA3Q8IXA5 215 aa7.74□□□□□ -1.17
CDC27-215ENST00000573550 ZNF654Q8IZM8 581 aa7.74□□□□□ -1.17
CDC27-215ENST00000573550 NKD1Q969G9 470 aa7.74□□□□□ -1.17
CDC27-215ENST00000573550 TPX2Q9ULW0 747 aaKnown RBP7.74□□□□□ -1.17
CDC27-215ENST00000573550 WNT11O96014 354 aa7.73□□□□□ -1.17
CDC27-215ENST00000573550 NKPD1Q17RQ9 610 aa7.73□□□□□ -1.17
CDC27-215ENST00000573550 SFRP5Q5T4F7 317 aa7.73□□□□□ -1.17
CDC27-215ENST00000573550 GK5Q6ZS86 529 aa7.73□□□□□ -1.17
CDC27-215ENST00000573550 NBPF11Q86T75 865 aa7.73□□□□□ -1.17
CDC27-215ENST00000573550 ABCC9O60706 1549 aa7.73□□□□□ -1.17
CDC27-215ENST00000573550 SLC22A31A6NKX4 558 aa7.72□□□□□ -1.17
CDC27-215ENST00000573550 GNAT3A8MTJ3 354 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms