RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 DCTPP1Q9H773 170 aa15.36■□□□□ 0.05
NPLOC4-213ENST00000573519 ARMT1Q9H993 441 aa15.36■□□□□ 0.05
NPLOC4-213ENST00000573519 MCM9Q9NXL9 1143 aa15.36■□□□□ 0.05
NPLOC4-213ENST00000573519 TMOD4Q9NZQ9 345 aa15.36■□□□□ 0.05
NPLOC4-213ENST00000573519 ZBTB21Q9ULJ3 1066 aa15.36■□□□□ 0.05
NPLOC4-213ENST00000573519 POTEFA5A3E0 1075 aa15.35■□□□□ 0.05
NPLOC4-213ENST00000573519 GH2P01242 217 aa15.35■□□□□ 0.05
NPLOC4-213ENST00000573519 OSBPP22059 807 aa15.35■□□□□ 0.05
NPLOC4-213ENST00000573519 ADD2P35612 726 aa15.35■□□□□ 0.05
NPLOC4-213ENST00000573519 PRMT2P55345 433 aa15.35■□□□□ 0.05
NPLOC4-213ENST00000573519 ANKRD13CQ8N6S4 541 aa15.35■□□□□ 0.05
NPLOC4-213ENST00000573519 RAET1EQ8TD07 263 aa15.35■□□□□ 0.05
NPLOC4-213ENST00000573519 GPATCH3Q96I76 525 aa15.35■□□□□ 0.05
NPLOC4-213ENST00000573519 WDR18Q9BV38 432 aa15.35■□□□□ 0.05
NPLOC4-213ENST00000573519 TMEM106CQ9BVX2 250 aa15.35■□□□□ 0.05
NPLOC4-213ENST00000573519 EHD4Q9H223 541 aa15.35■□□□□ 0.05
NPLOC4-213ENST00000573519 ECHDC1Q9NTX5 307 aa15.35■□□□□ 0.05
NPLOC4-213ENST00000573519 SRRDQ9UH36 339 aa15.35■□□□□ 0.05
NPLOC4-213ENST00000573519 PCDHB15Q9Y5E8 787 aa15.35■□□□□ 0.05
NPLOC4-213ENST00000573519 MYPNQ86TC9 1320 aa15.35■□□□□ 0.05
NPLOC4-213ENST00000573519 PTPRFP10586 1907 aa15.35■□□□□ 0.05
NPLOC4-213ENST00000573519 MBD4O95243 580 aa15.34■□□□□ 0.05
NPLOC4-213ENST00000573519 PLCD1P51178 756 aa15.34■□□□□ 0.05
NPLOC4-213ENST00000573519 BACE1P56817 501 aa15.34■□□□□ 0.05
NPLOC4-213ENST00000573519 RAB3GAP1Q15042 981 aa15.34■□□□□ 0.05
NPLOC4-213ENST00000573519 CERKLQ49MI3 558 aaPredicted RBP15.34■□□□□ 0.05
NPLOC4-213ENST00000573519 SH3D19Q5HYK7 790 aa15.34■□□□□ 0.05
NPLOC4-213ENST00000573519 TSHZ3Q63HK5 1081 aa15.34■□□□□ 0.05
NPLOC4-213ENST00000573519 TATDN1Q6P1N9 297 aa15.34■□□□□ 0.05
NPLOC4-213ENST00000573519 ZNF333Q96JL9 665 aa15.34■□□□□ 0.05
NPLOC4-213ENST00000573519 GINM1Q9NU53 330 aa15.34■□□□□ 0.05
NPLOC4-213ENST00000573519 MYH1P12882 1939 aa15.34■□□□□ 0.05
NPLOC4-213ENST00000573519 LOC285556D6RIA3 1793 aa15.34■□□□□ 0.05
NPLOC4-213ENST00000573519 NAV1Q8NEY1 1877 aa15.33■□□□□ 0.05
NPLOC4-213ENST00000573519 USP17L10C9JJH3 530 aa15.33■□□□□ 0.04
NPLOC4-213ENST00000573519 CHGBP05060 677 aa15.33■□□□□ 0.04
NPLOC4-213ENST00000573519 IRX3P78415 501 aaPredicted RBP15.33■□□□□ 0.04
NPLOC4-213ENST00000573519 PRKCZQ05513 592 aa15.33■□□□□ 0.04
NPLOC4-213ENST00000573519 ZYXQ15942 572 aaKnown RBP15.33■□□□□ 0.04
NPLOC4-213ENST00000573519 ABCB5Q2M3G0 1257 aa15.33■□□□□ 0.04
NPLOC4-213ENST00000573519 ZSCAN25Q6NSZ9 544 aa15.33■□□□□ 0.04
NPLOC4-213ENST00000573519 FEZ1Q99689 392 aa15.33■□□□□ 0.04
NPLOC4-213ENST00000573519 C19orf81C9J6K1 198 aa15.32■□□□□ 0.04
NPLOC4-213ENST00000573519 TNPO2O14787 897 aaKnown RBP15.32■□□□□ 0.04
NPLOC4-213ENST00000573519 PRKAB2O43741 272 aa15.32■□□□□ 0.04
NPLOC4-213ENST00000573519 ASCC2Q9H1I8 757 aaPredicted RBP15.32■□□□□ 0.04
NPLOC4-213ENST00000573519 CABP5Q9NP86 173 aa15.32■□□□□ 0.04
NPLOC4-213ENST00000573519 DCP1AQ9NPI6 582 aaPredicted RBP15.32■□□□□ 0.04
NPLOC4-213ENST00000573519 MPHOSPH10O00566 681 aaKnown RBP15.31■□□□□ 0.04
NPLOC4-213ENST00000573519 CYP2D6P10635 497 aa15.31■□□□□ 0.04
NPLOC4-213ENST00000573519 EN2P19622 333 aaPredicted RBP15.31■□□□□ 0.04
NPLOC4-213ENST00000573519 GRK4P32298 578 aa15.31■□□□□ 0.04
NPLOC4-213ENST00000573519 SHMT1P34896 483 aa15.31■□□□□ 0.04
NPLOC4-213ENST00000573519 EVX2Q03828 476 aa15.31■□□□□ 0.04
NPLOC4-213ENST00000573519 UBE3CQ15386 1083 aa15.31■□□□□ 0.04
NPLOC4-213ENST00000573519 DDRGK1Q96HY6 314 aa15.31■□□□□ 0.04
NPLOC4-213ENST00000573519 BIN2Q9UBW5 565 aaPredicted RBP15.31■□□□□ 0.04
NPLOC4-213ENST00000573519 TAOK2Q9UL54 1235 aa15.31■□□□□ 0.04
NPLOC4-213ENST00000573519 GABRQQ9UN88 632 aa15.31■□□□□ 0.04
NPLOC4-213ENST00000573519 SLC4A4Q9Y6R1 1079 aa15.31■□□□□ 0.04
NPLOC4-213ENST00000573519 DDX60LQ5H9U9 1706 aaKnown RBP15.31■□□□□ 0.04
NPLOC4-213ENST00000573519 HTTP42858 3142 aa15.3■□□□□ 0.04
NPLOC4-213ENST00000573519 GCLCP48506 637 aaPredicted RBP15.3■□□□□ 0.04
NPLOC4-213ENST00000573519 FAM110CQ1W6H9 321 aa15.3■□□□□ 0.04
NPLOC4-213ENST00000573519 USP17L2Q6R6M4 530 aa15.3■□□□□ 0.04
NPLOC4-213ENST00000573519 AMOTL1Q8IY63 956 aa15.3■□□□□ 0.04
NPLOC4-213ENST00000573519 ATP8A2Q9NTI2 1148 aa15.3■□□□□ 0.04
NPLOC4-213ENST00000573519 ZBTB47Q9UFB7 747 aaPredicted RBP15.3■□□□□ 0.04
NPLOC4-213ENST00000573519 COA7Q96BR5 231 aa15.29■□□□□ 0.04
NPLOC4-213ENST00000573519 P2RX7Q99572 595 aaKnown RBP15.29■□□□□ 0.04
NPLOC4-213ENST00000573519 PUS7LQ9H0K6 701 aaKnown RBP15.29■□□□□ 0.04
NPLOC4-213ENST00000573519 EMILIN3Q9NT22 766 aa15.29■□□□□ 0.04
NPLOC4-213ENST00000573519 ADCY3O60266 1144 aa15.28■□□□□ 0.04
NPLOC4-213ENST00000573519 HOXA7P31268 230 aaPredicted RBP15.28■□□□□ 0.04
NPLOC4-213ENST00000573519 FLT3LGP49771 235 aa15.28■□□□□ 0.04
NPLOC4-213ENST00000573519 GABPAQ06546 454 aa15.28■□□□□ 0.04
NPLOC4-213ENST00000573519 SEPT2Q15019 361 aa15.28■□□□□ 0.04
NPLOC4-213ENST00000573519 MTFR1Q15390 333 aa15.28■□□□□ 0.04
NPLOC4-213ENST00000573519 KBTBD3Q8NAB2 608 aa15.28■□□□□ 0.04
NPLOC4-213ENST00000573519 SLC44A5Q8NCS7 719 aa15.28■□□□□ 0.04
NPLOC4-213ENST00000573519 ACER1Q8TDN7 264 aa15.28■□□□□ 0.04
NPLOC4-213ENST00000573519 DYNLL2Q96FJ2 89 aa15.28■□□□□ 0.04
NPLOC4-213ENST00000573519 SWAP70Q9UH65 585 aa15.28■□□□□ 0.04
NPLOC4-213ENST00000573519 TNRC18O15417 2968 aaPredicted RBP15.27■□□□□ 0.04
NPLOC4-213ENST00000573519 MGAMO43451 1857 aa15.27■□□□□ 0.04
NPLOC4-213ENST00000573519 CYP2D7A0A087X1C5 515 aa15.27■□□□□ 0.04
NPLOC4-213ENST00000573519 USP17L12C9JPN9 530 aa15.27■□□□□ 0.04
NPLOC4-213ENST00000573519 USP17L21D6R901 530 aa15.27■□□□□ 0.04
NPLOC4-213ENST00000573519 ERC2O15083 957 aa15.27■□□□□ 0.04
NPLOC4-213ENST00000573519 PEX10O60683 326 aa15.27■□□□□ 0.04
NPLOC4-213ENST00000573519 USP14P54578 494 aa15.27■□□□□ 0.04
NPLOC4-213ENST00000573519 HERVK_113P62684 666 aa15.27■□□□□ 0.04
NPLOC4-213ENST00000573519 UBXN2AP68543 259 aa15.27■□□□□ 0.04
NPLOC4-213ENST00000573519 SLAIN1Q8ND83 568 aa15.27■□□□□ 0.04
NPLOC4-213ENST00000573519 OTUD7AQ8TE49 926 aaPredicted RBP15.27■□□□□ 0.04
NPLOC4-213ENST00000573519 PAGR1Q9BTK6 254 aa15.27■□□□□ 0.04
NPLOC4-213ENST00000573519 SUPT16HQ9Y5B9 1047 aaKnown RBP15.27■□□□□ 0.04
NPLOC4-213ENST00000573519 RBBP6Q7Z6E9 1792 aaKnown RBP15.26■□□□□ 0.03
NPLOC4-213ENST00000573519 TTC41PQ6P2S7 1318 aa15.26■□□□□ 0.03
NPLOC4-213ENST00000573519 RNF113AO15541 343 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms