RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 ANKRD13CQ8N6S4 541 aa11.7□□□□□ -0.54
NPLOC4-212ENST00000573328 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.7□□□□□ -0.54
NPLOC4-212ENST00000573328 CRNKL1Q9BZJ0 848 aaKnown RBP11.7□□□□□ -0.54
NPLOC4-212ENST00000573328 LRRCC1Q9C099 1032 aa11.7□□□□□ -0.54
NPLOC4-212ENST00000573328 DNAJC18Q9H819 358 aa11.7□□□□□ -0.54
NPLOC4-212ENST00000573328 TMOD4Q9NZQ9 345 aa11.7□□□□□ -0.54
NPLOC4-212ENST00000573328 TAOK2Q9UL54 1235 aa11.7□□□□□ -0.54
NPLOC4-212ENST00000573328 ZNF532Q9HCE3 1301 aa11.69□□□□□ -0.54
NPLOC4-212ENST00000573328 TNPO2O14787 897 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-212ENST00000573328 POLR3DP05423 398 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-212ENST00000573328 EN2P19622 333 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-212ENST00000573328 GRK4P32298 578 aa11.69□□□□□ -0.54
NPLOC4-212ENST00000573328 IRX3P78415 501 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-212ENST00000573328 PRKCZQ05513 592 aa11.69□□□□□ -0.54
NPLOC4-212ENST00000573328 SHROOM1Q2M3G4 852 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-212ENST00000573328 TTC6Q86TZ1 520 aa11.69□□□□□ -0.54
NPLOC4-212ENST00000573328 EDC3Q96F86 508 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-212ENST00000573328 FEZ1Q99689 392 aa11.69□□□□□ -0.54
NPLOC4-212ENST00000573328 BOLA2Q9H3K6 86 aa11.69□□□□□ -0.54
NPLOC4-212ENST00000573328 PAG1Q9NWQ8 432 aa11.69□□□□□ -0.54
NPLOC4-212ENST00000573328 SERPINB13Q9UIV8 391 aa11.69□□□□□ -0.54
NPLOC4-212ENST00000573328 ZBTB21Q9ULJ3 1066 aa11.69□□□□□ -0.54
NPLOC4-212ENST00000573328 MKI67P46013 3256 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-212ENST00000573328 USP17L10C9JJH3 530 aa11.68□□□□□ -0.54
NPLOC4-212ENST00000573328 SMARCA5O60264 1052 aaPredicted RBP11.68□□□□□ -0.54
NPLOC4-212ENST00000573328 FAM110CQ1W6H9 321 aa11.68□□□□□ -0.54
NPLOC4-212ENST00000573328 PRPF38BQ5VTL8 546 aaKnown RBP11.68□□□□□ -0.54
NPLOC4-212ENST00000573328 COA7Q96BR5 231 aa11.68□□□□□ -0.54
NPLOC4-212ENST00000573328 RIOK1Q9BRS2 568 aaKnown RBP11.68□□□□□ -0.54
NPLOC4-212ENST00000573328 WDR18Q9BV38 432 aa11.68□□□□□ -0.54
NPLOC4-212ENST00000573328 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.68□□□□□ -0.544e-9■■■□□ 15.4
NPLOC4-212ENST00000573328 ASCC2Q9H1I8 757 aaPredicted RBP11.68□□□□□ -0.54
NPLOC4-212ENST00000573328 GINM1Q9NU53 330 aa11.68□□□□□ -0.54
NPLOC4-212ENST00000573328 GH2P01242 217 aa11.67□□□□□ -0.54
NPLOC4-212ENST00000573328 GCLCP48506 637 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-212ENST00000573328 BACE1P56817 501 aa11.67□□□□□ -0.54
NPLOC4-212ENST00000573328 UBXN2AP68543 259 aa11.67□□□□□ -0.54
NPLOC4-212ENST00000573328 RAB3GAP1Q15042 981 aa11.67□□□□□ -0.54
NPLOC4-212ENST00000573328 ZYXQ15942 572 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-212ENST00000573328 SH3D19Q5HYK7 790 aa11.67□□□□□ -0.54
NPLOC4-212ENST00000573328 METTL16Q86W50 562 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-212ENST00000573328 SLAIN1Q8ND83 568 aa11.67□□□□□ -0.54
NPLOC4-212ENST00000573328 GPATCH3Q96I76 525 aa11.67□□□□□ -0.54
NPLOC4-212ENST00000573328 EHD4Q9H223 541 aa11.67□□□□□ -0.54
NPLOC4-212ENST00000573328 CABP5Q9NP86 173 aa11.67□□□□□ -0.54
NPLOC4-212ENST00000573328 MCM9Q9NXL9 1143 aa11.67□□□□□ -0.54
NPLOC4-212ENST00000573328 GABRQQ9UN88 632 aa11.67□□□□□ -0.54
NPLOC4-212ENST00000573328 PLXNB2O15031 1838 aa11.67□□□□□ -0.54
NPLOC4-212ENST00000573328 C19orf81C9J6K1 198 aa11.66□□□□□ -0.54
NPLOC4-212ENST00000573328 MPHOSPH10O00566 681 aaKnown RBP11.66□□□□□ -0.54
NPLOC4-212ENST00000573328 ATP5JP18859 108 aa11.66□□□□□ -0.54
NPLOC4-212ENST00000573328 JAG1P78504 1218 aa11.66□□□□□ -0.54
NPLOC4-212ENST00000573328 MTFR1Q15390 333 aa11.66□□□□□ -0.54
NPLOC4-212ENST00000573328 ABCB5Q2M3G0 1257 aa11.66□□□□□ -0.54
NPLOC4-212ENST00000573328 CERKLQ49MI3 558 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-212ENST00000573328 LCORLQ8N3X6 602 aa11.66□□□□□ -0.54
NPLOC4-212ENST00000573328 SDR42E1Q8WUS8 393 aa11.66□□□□□ -0.54
NPLOC4-212ENST00000573328 YTHDC1Q96MU7 727 aaKnown RBP11.66□□□□□ -0.54
NPLOC4-212ENST00000573328 HAUS7Q99871 368 aa11.66□□□□□ -0.54
NPLOC4-212ENST00000573328 ARMT1Q9H993 441 aa11.66□□□□□ -0.54
NPLOC4-212ENST00000573328 ADCY3O60266 1144 aa11.65□□□□□ -0.54
NPLOC4-212ENST00000573328 MBD4O95243 580 aa11.65□□□□□ -0.54
NPLOC4-212ENST00000573328 ADD2P35612 726 aa11.65□□□□□ -0.54
NPLOC4-212ENST00000573328 FLT3LGP49771 235 aa11.65□□□□□ -0.54
NPLOC4-212ENST00000573328 PLCD1P51178 756 aa11.65□□□□□ -0.54
NPLOC4-212ENST00000573328 ZSCAN25Q6NSZ9 544 aa11.65□□□□□ -0.54
NPLOC4-212ENST00000573328 TATDN1Q6P1N9 297 aa11.65□□□□□ -0.54
NPLOC4-212ENST00000573328 USP17L2Q6R6M4 530 aa11.65□□□□□ -0.54
NPLOC4-212ENST00000573328 CCAR1Q8IX12 1150 aaKnown RBP11.65□□□□□ -0.54
NPLOC4-212ENST00000573328 AMOTL1Q8IY63 956 aa11.65□□□□□ -0.54
NPLOC4-212ENST00000573328 DDRGK1Q96HY6 314 aa11.65□□□□□ -0.54
NPLOC4-212ENST00000573328 RNF208Q9H0X6 261 aa11.65□□□□□ -0.54
NPLOC4-212ENST00000573328 TCRBV5S4A2TA0A5A2 114 aa11.64□□□□□ -0.55
NPLOC4-212ENST00000573328 CCL5P13501 91 aa11.64□□□□□ -0.55
NPLOC4-212ENST00000573328 ELNP15502 786 aa11.64□□□□□ -0.55
NPLOC4-212ENST00000573328 HERVK_113P62684 666 aa11.64□□□□□ -0.55
NPLOC4-212ENST00000573328 SLFNL1Q499Z3 407 aa11.64□□□□□ -0.55
NPLOC4-212ENST00000573328 PAGR1Q9BTK6 254 aa11.64□□□□□ -0.55
NPLOC4-212ENST00000573328 CWC22Q9HCG8 908 aaKnown RBP11.64□□□□□ -0.55
NPLOC4-212ENST00000573328 DCP1AQ9NPI6 582 aaPredicted RBP11.64□□□□□ -0.55
NPLOC4-212ENST00000573328 MYH4Q9Y623 1939 aa11.64□□□□□ -0.55
NPLOC4-212ENST00000573328 COL11A1P12107 1806 aaPredicted RBP11.63□□□□□ -0.55
NPLOC4-212ENST00000573328 PARP14Q460N5 1801 aa11.63□□□□□ -0.55
NPLOC4-212ENST00000573328 SLC34A2O95436 690 aa11.63□□□□□ -0.55
NPLOC4-212ENST00000573328 INHAP05111 366 aa11.63□□□□□ -0.55
NPLOC4-212ENST00000573328 HOXA7P31268 230 aaPredicted RBP11.63□□□□□ -0.55
NPLOC4-212ENST00000573328 SHMT1P34896 483 aa11.63□□□□□ -0.55
NPLOC4-212ENST00000573328 USP14P54578 494 aa11.63□□□□□ -0.55
NPLOC4-212ENST00000573328 RRP1P56182 461 aaKnown RBP11.63□□□□□ -0.55
NPLOC4-212ENST00000573328 NKX2-3Q8TAU0 364 aa11.63□□□□□ -0.55
NPLOC4-212ENST00000573328 P2RX7Q99572 595 aaKnown RBP11.63□□□□□ -0.55
NPLOC4-212ENST00000573328 ECHDC1Q9NTX5 307 aa11.63□□□□□ -0.55
NPLOC4-212ENST00000573328 PRKAB2O43741 272 aa11.62□□□□□ -0.55
NPLOC4-212ENST00000573328 CYP2D6P10635 497 aa11.62□□□□□ -0.55
NPLOC4-212ENST00000573328 EVX2Q03828 476 aa11.62□□□□□ -0.55
NPLOC4-212ENST00000573328 IRF5Q13568 498 aa11.62□□□□□ -0.55
NPLOC4-212ENST00000573328 SEPT2Q15019 361 aa11.62□□□□□ -0.55
NPLOC4-212ENST00000573328 TSHZ3Q63HK5 1081 aa11.62□□□□□ -0.55
NPLOC4-212ENST00000573328 GPRC5AQ8NFJ5 357 aa11.62□□□□□ -0.55
NPLOC4-212ENST00000573328 PXYLP1Q8TE99 480 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms