RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 GDPD2Q9HCC8 539 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 TBC1D7Q9P0N9 293 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 CNPY2Q9Y2B0 182 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 MYH15Q9Y2K3 1946 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 ADCY9O60503 1353 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 LRRC10BA6NIK2 292 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 PPFIA3O75145 1194 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 PABPC4Q13310 644 aaKnown RBP eCLIP11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 CCDC92Q53HC0 331 aaPredicted RBP11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 YTHDF3Q7Z739 585 aaKnown RBP11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 TMEM110Q86TL2 294 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 CCDC125Q86Z20 511 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 KIRREL3Q8IZU9 778 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 GALNT15Q8N3T1 639 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 RUFY1Q96T51 708 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 TSC22D3Q99576 134 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 YIPF3Q9GZM5 350 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 GBP3Q9H0R5 595 aa11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 NPHP4O75161 1426 aaPredicted RBP11.84□□□□□ -0.51
CHRNB1-205ENST00000573209 SLC27A2O14975 620 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 CREB3O43889 395 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 ALDH1L1O75891 902 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 USP5P45974 858 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 SCNN1BP51168 640 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 GNL2Q13823 731 aaKnown RBP11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 POSTNQ15063 836 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 SLC4A8Q2Y0W8 1093 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 CCDC40Q4G0X9 1142 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 SARM1Q6SZW1 724 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 RASEFQ8IZ41 740 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 CLASRPQ8N2M8 674 aaKnown RBP11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 GOLGA1Q92805 767 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 KCNN1Q92952 543 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 BHMTQ93088 406 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 VCPKMTQ9H867 229 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 HYPKQ9NX55 129 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 MAPK8IP1Q9UQF2 711 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 TRPC6Q9Y210 931 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 M0R2C6 588 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 HIP1O00291 1037 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 MAP4K4O95819 1239 aaPredicted RBP11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 STIP1P31948 543 aaKnown RBP11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 TXLNAP40222 546 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 IFFO1Q0D2I5 559 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 MYBPC3Q14896 1274 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 KIAA0753Q2KHM9 967 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 TMC6Q7Z403 805 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 LUZP1Q86V48 1076 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 APLFQ8IW19 511 aaPredicted RBP11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 ABTB2Q8N961 1025 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 CCDC102AQ96A19 550 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 SPAG5Q96R06 1193 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 CHPF2Q9P2E5 772 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 HDAC6Q9UBN7 1215 aa11.83□□□□□ -0.52
CHRNB1-205ENST00000573209 MEFVO15553 781 aaPredicted RBP11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 VIL1P09327 827 aaKnown RBP11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 DESP17661 470 aa11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 BEND6Q5SZJ8 279 aaPredicted RBP11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 BZW1Q7L1Q6 419 aaKnown RBP11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 PIAS4Q8N2W9 510 aaPredicted RBP11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 GBP7Q8N8V2 638 aaPredicted RBP11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 SMYD1Q8NB12 490 aa11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 IP6K1Q92551 441 aa11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 ZSWIM6Q9HCJ5 1215 aa11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 ECHDC1Q9NTX5 307 aa11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 ZNF510Q9Y2H8 683 aa11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 MRC1P22897 1456 aa11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 PI4KAP2A4QPH2 592 aa11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 ZSCAN12O43309 604 aa11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 CEP104O60308 925 aa11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 WDR78Q5VTH9 848 aa11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 DPY19L2Q6NUT2 758 aa11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 PI4KAP1Q8N8J0 262 aa11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 ATP11CQ8NB49 1132 aa11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 EVI5LQ96CN4 794 aa11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 CBX8Q9HC52 389 aa11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 IQSEC3Q9UPP2 1182 aaPredicted RBP11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 CYP46A1Q9Y6A2 500 aa11.82□□□□□ -0.52
CHRNB1-205ENST00000573209 MYO1BO43795 1136 aa11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 N4BP1O75113 896 aaKnown RBP11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 TYRO3Q06418 890 aa11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 DYNC1I2Q13409 638 aaKnown RBP11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 SF3B2Q13435 895 aaKnown RBP11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 DRP2Q13474 957 aa11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 KIF4BQ2VIQ3 1234 aa11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 DBF4Q9UBU7 674 aaPredicted RBP11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 RABL2BQ9UNT1 228 aa11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 TIMM44O43615 452 aa11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 URI1O94763 535 aaPredicted RBP11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 GNAT1P11488 350 aa11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 EIF2S2P20042 333 aaKnown RBP11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 GJB2P29033 226 aa11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 MAP3K11Q16584 847 aa11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 ZNF394Q53GI3 561 aa11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 AKAP4Q5JQC9 854 aa11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 NAT10Q9H0A0 1025 aaKnown RBP11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 GPCPD1Q9NPB8 672 aa11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 SNRKQ9NRH2 765 aa11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 SPG7Q9UQ90 795 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms