RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 ENOX2Q16206 610 aaKnown RBP10.28□□□□□ -0.76
TVP23A-205ENST00000572428 VMP1Q96GC9 406 aa10.28□□□□□ -0.76
TVP23A-205ENST00000572428 DHRS1Q96LJ7 313 aa10.28□□□□□ -0.76
TVP23A-205ENST00000572428 BRCA1P38398 1863 aaKnown RBP10.27□□□□□ -0.76
TVP23A-205ENST00000572428 NACA2Q9H009 215 aa10.27□□□□□ -0.76
TVP23A-205ENST00000572428 STK32BQ9NY57 414 aa10.27□□□□□ -0.76
TVP23A-205ENST00000572428 TMCC3Q9ULS5 477 aa10.27□□□□□ -0.76
TVP23A-205ENST00000572428 SCINQ9Y6U3 715 aa10.27□□□□□ -0.76
TVP23A-205ENST00000572428 CA8P35219 290 aa10.27□□□□□ -0.77
TVP23A-205ENST00000572428 SYNE3Q6ZMZ3 975 aa10.27□□□□□ -0.77
TVP23A-205ENST00000572428 PARP9Q8IXQ6 854 aa10.27□□□□□ -0.77
TVP23A-205ENST00000572428 RPUSD2Q8IZ73 545 aaKnown RBP10.27□□□□□ -0.77
TVP23A-205ENST00000572428 CCDC34Q96HJ3 373 aa10.27□□□□□ -0.77
TVP23A-205ENST00000572428 CEP63Q96MT8 703 aa10.27□□□□□ -0.77
TVP23A-205ENST00000572428 ANTXR1Q9H6X2 564 aa10.27□□□□□ -0.77
TVP23A-205ENST00000572428 PA2G4Q9UQ80 394 aaKnown RBP10.27□□□□□ -0.77
TVP23A-205ENST00000572428 EYA2O00167 538 aa10.27□□□□□ -0.77
TVP23A-205ENST00000572428 ATICP31939 592 aa10.27□□□□□ -0.77
TVP23A-205ENST00000572428 DDR1Q08345 913 aa10.27□□□□□ -0.77
TVP23A-205ENST00000572428 CATIPQ7Z7H3 387 aa10.27□□□□□ -0.77
TVP23A-205ENST00000572428 C16orf71Q8IYS4 520 aaPredicted RBP10.27□□□□□ -0.77
TVP23A-205ENST00000572428 GREM2Q9H772 168 aa10.27□□□□□ -0.77
TVP23A-205ENST00000572428 CHMP5Q9NZZ3 219 aa10.27□□□□□ -0.77
TVP23A-205ENST00000572428 ZNF609O15014 1411 aa10.27□□□□□ -0.77
TVP23A-205ENST00000572428 DOCK2Q92608 1830 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 CACNA1SQ13698 1873 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 MYH7P12883 1935 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 SLFN14P0C7P3 912 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 IL15P40933 162 aaPredicted RBP10.26□□□□□ -0.77
TVP23A-205ENST00000572428 ADCY2Q08462 1091 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 COL19A1Q14993 1142 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 CRY2Q49AN0 593 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 DEFB132Q7Z7B7 95 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 TMEM110Q86TL2 294 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 KIAA1958Q8N8K9 716 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 INCENPQ9NQS7 918 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 ITGA6P23229 1130 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 PDE1AP54750 535 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 G3BP1Q13283 466 aaKnown RBP eCLIP10.26□□□□□ -0.77
TVP23A-205ENST00000572428 IFIT5Q13325 482 aaKnown RBP10.26□□□□□ -0.77
TVP23A-205ENST00000572428 CCDC57Q2TAC2 916 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 CCDC152Q4G0S7 254 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 AGAP9Q5VTM2 703 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 PRR5LQ6MZQ0 368 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 UPF1Q92900 1129 aaKnown RBP eCLIP10.26□□□□□ -0.77
TVP23A-205ENST00000572428 FEZ1Q99689 392 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 CHST12Q9NRB3 414 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 MYH13Q9UKX3 1938 aa10.26□□□□□ -0.77
TVP23A-205ENST00000572428 ZNF24P17028 368 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 SDSP20132 328 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 NSUN2Q08J23 767 aaKnown RBP eCLIP10.25□□□□□ -0.77
TVP23A-205ENST00000572428 RAD51AP2Q09MP3 1159 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 CCDC144BQ3MJ40 725 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 CCDC91Q7Z6B0 441 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 UBE2Q1Q7Z7E8 422 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 NUTM1Q86Y26 1132 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 CHCHD4Q8N4Q1 142 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 VGLL2Q8N8G2 317 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 SLC43A3Q8NBI5 491 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 KCNB2Q92953 911 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 DDX27Q96GQ7 796 aaKnown RBP10.25□□□□□ -0.77
TVP23A-205ENST00000572428 IQCGQ9H095 443 aaKnown RBP10.25□□□□□ -0.77
TVP23A-205ENST00000572428 VEZTQ9HBM0 779 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.25□□□□□ -0.77
TVP23A-205ENST00000572428 RECKO95980 971 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 SERPINB2P05120 415 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 PDAP1Q13442 181 aaKnown RBP10.25□□□□□ -0.77
TVP23A-205ENST00000572428 SIM2Q14190 667 aaPredicted RBP10.25□□□□□ -0.77
TVP23A-205ENST00000572428 SLC16A10Q8TF71 515 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 KCNN1Q92952 543 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 RASSF4Q9H2L5 321 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.25□□□□□ -0.77
TVP23A-205ENST00000572428 TTC41PQ6P2S7 1318 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 PRSS47A8MTI9 375 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 HCLS1P14317 486 aaPredicted RBP10.25□□□□□ -0.77
TVP23A-205ENST00000572428 IGBP1P78318 339 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 SUGP1Q8IWZ8 645 aaKnown RBP10.25□□□□□ -0.77
TVP23A-205ENST00000572428 KLHDC4Q8TBB5 520 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 TMEM165Q9HC07 324 aa10.25□□□□□ -0.77
TVP23A-205ENST00000572428 MYO1BO43795 1136 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 REC8O95072 547 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 FOSL1P15407 271 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 PKN1Q16512 942 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 MCTP2Q6DN12 878 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 MTHFD1LQ6UB35 978 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 C3orf67Q6ZVT6 689 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 RELL1Q8IUW5 271 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 USP33Q8TEY7 942 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 HOXD10P28358 340 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 CCDC93Q567U6 631 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 WWC2Q6AWC2 1192 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 OTUD7AQ8TE49 926 aaPredicted RBP10.24□□□□□ -0.77
TVP23A-205ENST00000572428 BICD1Q96G01 975 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.24□□□□□ -0.77
TVP23A-205ENST00000572428 SNRKQ9NRH2 765 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 JRKLQ9Y4A0 524 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 TMCO5BA8MYB1 307 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 CD53P19397 219 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 PRPF4BQ13523 1007 aaKnown RBP10.24□□□□□ -0.77
TVP23A-205ENST00000572428 BICDL1Q6ZP65 573 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms