RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 NOL10Q9BSC4 688 aaKnown RBP24.46■■□□□ 1.51
CCDC40-206ENST00000572083 AATFQ9NY61 560 aaKnown RBP eCLIP24.46■■□□□ 1.51
CCDC40-206ENST00000572083 PI4KBQ9UBF8 816 aa24.46■■□□□ 1.51
CCDC40-206ENST00000572083 STXBP5LQ9Y2K9 1186 aa24.46■■□□□ 1.51
CCDC40-206ENST00000572083 GDF11O95390 407 aa24.45■■□□□ 1.5
CCDC40-206ENST00000572083 ASNSP08243 561 aa24.45■■□□□ 1.5
CCDC40-206ENST00000572083 CACNB2Q08289 660 aaPredicted RBP24.45■■□□□ 1.5
CCDC40-206ENST00000572083 MTX1Q13505 466 aa24.45■■□□□ 1.5
CCDC40-206ENST00000572083 PDE3AQ14432 1141 aa24.45■■□□□ 1.5
CCDC40-206ENST00000572083 MTMR10Q9NXD2 777 aa24.45■■□□□ 1.5
CCDC40-206ENST00000572083 CDK5RAP2Q96SN8 1893 aa24.45■■□□□ 1.5
CCDC40-206ENST00000572083 GNAI3P08754 354 aa24.44■■□□□ 1.5
CCDC40-206ENST00000572083 XRCC5P13010 732 aaKnown RBP24.44■■□□□ 1.5
CCDC40-206ENST00000572083 CCND3P30281 292 aaPredicted RBP24.44■■□□□ 1.5
CCDC40-206ENST00000572083 CCL14Q16627 93 aa24.44■■□□□ 1.5
CCDC40-206ENST00000572083 MAPKAPK5Q8IW41 473 aa24.44■■□□□ 1.5
CCDC40-206ENST00000572083 PAGR1Q9BTK6 254 aa24.44■■□□□ 1.5
CCDC40-206ENST00000572083 PORCNQ9H237 461 aa24.44■■□□□ 1.5
CCDC40-206ENST00000572083 DHX36Q9H2U1 1008 aaKnown RBP24.44■■□□□ 1.5
CCDC40-206ENST00000572083 RBPJLQ9UBG7 517 aa24.44■■□□□ 1.5
CCDC40-206ENST00000572083 FLT1P17948 1338 aa24.43■■□□□ 1.5
CCDC40-206ENST00000572083 COL6A1P12109 1028 aa24.43■■□□□ 1.5
CCDC40-206ENST00000572083 MAPK4P31152 587 aa24.43■■□□□ 1.5
CCDC40-206ENST00000572083 ERVK-9P63128 1117 aa24.43■■□□□ 1.5
CCDC40-206ENST00000572083 ERVK-24P63145 666 aa24.43■■□□□ 1.5
CCDC40-206ENST00000572083 LRRC26Q2I0M4 334 aa24.43■■□□□ 1.5
CCDC40-206ENST00000572083 TRMT2AQ8IZ69 625 aaKnown RBP24.43■■□□□ 1.5
CCDC40-206ENST00000572083 CRACR2BQ8N4Y2 399 aaPredicted RBP24.43■■□□□ 1.5
CCDC40-206ENST00000572083 TGFBRAP1Q8WUH2 860 aa24.43■■□□□ 1.5
CCDC40-206ENST00000572083 FOCADQ5VW36 1801 aa24.42■■□□□ 1.5
CCDC40-206ENST00000572083 USP17L10C9JJH3 530 aa24.42■■□□□ 1.5
CCDC40-206ENST00000572083 CT47B1P0C2W7 299 aaPredicted RBP24.42■■□□□ 1.5
CCDC40-206ENST00000572083 MDM2Q00987 491 aaPredicted RBP24.42■■□□□ 1.5
CCDC40-206ENST00000572083 Q3C1V9 767 aa24.42■■□□□ 1.5
CCDC40-206ENST00000572083 NAA16Q6N069 864 aaPredicted RBP24.42■■□□□ 1.5
CCDC40-206ENST00000572083 GPR142Q7Z601 462 aa24.42■■□□□ 1.5
CCDC40-206ENST00000572083 CCAR1Q8IX12 1150 aaKnown RBP24.42■■□□□ 1.5
CCDC40-206ENST00000572083 USP6NLQ92738 828 aa24.42■■□□□ 1.5
CCDC40-206ENST00000572083 TRIM34Q9BYJ4 488 aa24.42■■□□□ 1.5
CCDC40-206ENST00000572083 SNRKQ9NRH2 765 aa24.42■■□□□ 1.5
CCDC40-206ENST00000572083 ZBTB21Q9ULJ3 1066 aa24.42■■□□□ 1.5
CCDC40-206ENST00000572083 EYSQ5T1H1 3165 aa24.42■■□□□ 1.5
CCDC40-206ENST00000572083 FRMPD3Q5JV73 1810 aa24.41■■□□□ 1.5
CCDC40-206ENST00000572083 C19orf81C9J6K1 198 aa24.41■■□□□ 1.5
CCDC40-206ENST00000572083 RGS2P41220 211 aa24.41■■□□□ 1.5
CCDC40-206ENST00000572083 LHX8Q68G74 356 aa24.41■■□□□ 1.5
CCDC40-206ENST00000572083 ADGRA1Q86SQ6 560 aa24.41■■□□□ 1.5
CCDC40-206ENST00000572083 TRMT44Q8IYL2 757 aaKnown RBP24.41■■□□□ 1.5
CCDC40-206ENST00000572083 PALD1Q9ULE6 856 aa24.41■■□□□ 1.5
CCDC40-206ENST00000572083 VCANP13611 3396 aa24.4■■□□□ 1.5
CCDC40-206ENST00000572083 BAG3O95817 575 aa24.4■■□□□ 1.5
CCDC40-206ENST00000572083 UQCRFS1P1P0C7P4 283 aa24.4■■□□□ 1.5
CCDC40-206ENST00000572083 MORN1Q5T089 497 aa24.4■■□□□ 1.5
CCDC40-206ENST00000572083 POTEEQ6S8J3 1075 aa24.4■■□□□ 1.5
CCDC40-206ENST00000572083 APBA2Q99767 749 aa24.4■■□□□ 1.5
CCDC40-206ENST00000572083 PLEKHH3Q7Z736 793 aa24.39■■□□□ 1.49
CCDC40-206ENST00000572083 METTL16Q86W50 562 aaKnown RBP24.39■■□□□ 1.49
CCDC40-206ENST00000572083 CWC22Q9HCG8 908 aaKnown RBP24.39■■□□□ 1.49
CCDC40-206ENST00000572083 EMILIN3Q9NT22 766 aa24.39■■□□□ 1.49
CCDC40-206ENST00000572083 SAP30BPQ9UHR5 308 aaKnown RBP24.39■■□□□ 1.49
CCDC40-206ENST00000572083 PNMA6EA0A0J9YXQ4 647 aa24.38■■□□□ 1.49
CCDC40-206ENST00000572083 PLCG2P16885 1265 aa24.38■■□□□ 1.49
CCDC40-206ENST00000572083 RARSP54136 660 aaKnown RBP24.38■■□□□ 1.49
CCDC40-206ENST00000572083 G3BP1Q13283 466 aaKnown RBP eCLIP24.38■■□□□ 1.49
CCDC40-206ENST00000572083 ZYXQ15942 572 aaKnown RBP24.37■■□□□ 1.49
CCDC40-206ENST00000572083 TTC39AQ5SRH9 613 aa24.37■■□□□ 1.49
CCDC40-206ENST00000572083 FOXP4Q8IVH2 680 aaPredicted RBP24.37■■□□□ 1.49
CCDC40-206ENST00000572083 GTF3C2Q8WUA4 911 aaPredicted RBP24.37■■□□□ 1.49
CCDC40-206ENST00000572083 NDUFB9Q9Y6M9 179 aa24.37■■□□□ 1.49
CCDC40-206ENST00000572083 MYO5AQ9Y4I1 1855 aaKnown RBP24.36■■□□□ 1.49
CCDC40-206ENST00000572083 PPP4CP60510 307 aa24.36■■□□□ 1.49
CCDC40-206ENST00000572083 GINM1Q9NU53 330 aa24.36■■□□□ 1.49
CCDC40-206ENST00000572083 GNAI2P04899 355 aa24.35■■□□□ 1.49
CCDC40-206ENST00000572083 CYP2E1P05181 493 aaPredicted RBP24.35■■□□□ 1.49
CCDC40-206ENST00000572083 USP17L2Q6R6M4 530 aa24.35■■□□□ 1.49
CCDC40-206ENST00000572083 TNNQ9UQP3 1299 aa24.35■■□□□ 1.49
CCDC40-206ENST00000572083 CNMDO75829 334 aa24.34■■□□□ 1.49
CCDC40-206ENST00000572083 GH2P01242 217 aa24.34■■□□□ 1.49
CCDC40-206ENST00000572083 HLA-DOAP06340 250 aa24.34■■□□□ 1.49
CCDC40-206ENST00000572083 DYNLL1P63167 89 aaKnown RBP24.34■■□□□ 1.49
CCDC40-206ENST00000572083 MAP2K5Q13163 448 aa24.34■■□□□ 1.49
CCDC40-206ENST00000572083 WDR78Q5VTH9 848 aa24.34■■□□□ 1.49
CCDC40-206ENST00000572083 ARHGAP45Q92619 1136 aa24.34■■□□□ 1.49
CCDC40-206ENST00000572083 DBNDD2Q9BQY9 259 aa24.34■■□□□ 1.49
CCDC40-206ENST00000572083 SENP6Q9GZR1 1112 aaPredicted RBP24.34■■□□□ 1.49
CCDC40-206ENST00000572083 FLRT1Q9NZU1 646 aa24.34■■□□□ 1.49
CCDC40-206ENST00000572083 GUCD1Q96NT3 240 aa24.33■■□□□ 1.49
CCDC40-206ENST00000572083 FEZ1Q99689 392 aa24.33■■□□□ 1.49
CCDC40-206ENST00000572083 COL25A1Q9BXS0 654 aaPredicted RBP24.33■■□□□ 1.49
CCDC40-206ENST00000572083 CDH23Q9H251 3354 aa24.33■■□□□ 1.48
CCDC40-206ENST00000572083 TNNI3KQ59H18 835 aa24.32■■□□□ 1.48
CCDC40-206ENST00000572083 CCDC158Q5M9N0 1113 aa24.32■■□□□ 1.48
CCDC40-206ENST00000572083 EDC3Q96F86 508 aaKnown RBP24.32■■□□□ 1.48
CCDC40-206ENST00000572083 FAM161BQ96MY7 647 aa24.32■■□□□ 1.48
CCDC40-206ENST00000572083 RABGAP1Q9Y3P9 1069 aa24.32■■□□□ 1.48
CCDC40-206ENST00000572083 FPGT-TNNI3KV9GXZ4 949 aa24.32■■□□□ 1.48
CCDC40-206ENST00000572083 TRIM27P14373 513 aa24.31■■□□□ 1.48
CCDC40-206ENST00000572083 ZAP70P43403 619 aa24.31■■□□□ 1.48
CCDC40-206ENST00000572083 ATN1P54259 1190 aaPredicted RBP24.31■■□□□ 1.48
CCDC40-206ENST00000572083 MFSD14CQ5VZR4 134 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms