RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 PRMT2P55345 433 aa16.54■□□□□ 0.24
PRPF8-202ENST00000571346 PRKCZQ05513 592 aa16.54■□□□□ 0.24
PRPF8-202ENST00000571346 PABPC4Q13310 644 aaKnown RBP eCLIP16.54■□□□□ 0.24
PRPF8-202ENST00000571346 FOXP4Q8IVH2 680 aaPredicted RBP16.54■□□□□ 0.24
PRPF8-202ENST00000571346 RIOK1Q9BRS2 568 aaKnown RBP16.54■□□□□ 0.24
PRPF8-202ENST00000571346 PAG1Q9NWQ8 432 aa16.54■□□□□ 0.24
PRPF8-202ENST00000571346 MYH7P12883 1935 aa16.54■□□□□ 0.24
PRPF8-202ENST00000571346 KIAA0100Q14667 2235 aaKnown RBP16.53■□□□□ 0.24
PRPF8-202ENST00000571346 HOXD10P28358 340 aa16.53■□□□□ 0.24
PRPF8-202ENST00000571346 JAG1P78504 1218 aa16.53■□□□□ 0.24
PRPF8-202ENST00000571346 METTL16Q86W50 562 aaKnown RBP16.53■□□□□ 0.24
PRPF8-202ENST00000571346 ANKRD13CQ8N6S4 541 aa16.53■□□□□ 0.24
PRPF8-202ENST00000571346 YTHDC1Q96MU7 727 aaKnown RBP16.53■□□□□ 0.24
PRPF8-202ENST00000571346 CRNKL1Q9BZJ0 848 aaKnown RBP16.53■□□□□ 0.24
PRPF8-202ENST00000571346 TMOD4Q9NZQ9 345 aa16.53■□□□□ 0.24
PRPF8-202ENST00000571346 SERPINB13Q9UIV8 391 aa16.53■□□□□ 0.24
PRPF8-202ENST00000571346 TNPO2O14787 897 aaKnown RBP16.52■□□□□ 0.24
PRPF8-202ENST00000571346 GH2P01242 217 aa16.52■□□□□ 0.24
PRPF8-202ENST00000571346 LCORLQ8N3X6 602 aa16.52■□□□□ 0.24
PRPF8-202ENST00000571346 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.52■□□□□ 0.241e-13■■□□□ 11.6
PRPF8-202ENST00000571346 POLR3DP05423 398 aaPredicted RBP16.51■□□□□ 0.23
PRPF8-202ENST00000571346 ATP5JP18859 108 aa16.51■□□□□ 0.23
PRPF8-202ENST00000571346 EN2P19622 333 aaPredicted RBP16.51■□□□□ 0.23
PRPF8-202ENST00000571346 BACE1P56817 501 aa16.51■□□□□ 0.23
PRPF8-202ENST00000571346 IRX3P78415 501 aaPredicted RBP16.51■□□□□ 0.23
PRPF8-202ENST00000571346 TTC6Q86TZ1 520 aa16.51■□□□□ 0.23
PRPF8-202ENST00000571346 SDR42E1Q8WUS8 393 aa16.51■□□□□ 0.23
PRPF8-202ENST00000571346 FEZ1Q99689 392 aa16.51■□□□□ 0.23
PRPF8-202ENST00000571346 WDR18Q9BV38 432 aa16.51■□□□□ 0.23
PRPF8-202ENST00000571346 EHD4Q9H223 541 aa16.51■□□□□ 0.23
PRPF8-202ENST00000571346 BIN2Q9UBW5 565 aaPredicted RBP16.51■□□□□ 0.23
PRPF8-202ENST00000571346 TAOK2Q9UL54 1235 aa16.51■□□□□ 0.23
PRPF8-202ENST00000571346 TCRBV5S4A2TA0A5A2 114 aa16.5■□□□□ 0.23
PRPF8-202ENST00000571346 USP17L10C9JJH3 530 aa16.5■□□□□ 0.23
PRPF8-202ENST00000571346 MBD4O95243 580 aa16.5■□□□□ 0.23
PRPF8-202ENST00000571346 GRK4P32298 578 aa16.5■□□□□ 0.23
PRPF8-202ENST00000571346 RAB3GAP1Q15042 981 aa16.5■□□□□ 0.23
PRPF8-202ENST00000571346 ZYXQ15942 572 aaKnown RBP16.5■□□□□ 0.23
PRPF8-202ENST00000571346 FAM110CQ1W6H9 321 aa16.5■□□□□ 0.23
PRPF8-202ENST00000571346 SLFNL1Q499Z3 407 aa16.5■□□□□ 0.23
PRPF8-202ENST00000571346 SH3D19Q5HYK7 790 aa16.5■□□□□ 0.23
PRPF8-202ENST00000571346 HAUS7Q99871 368 aa16.5■□□□□ 0.23
PRPF8-202ENST00000571346 ASCC2Q9H1I8 757 aaPredicted RBP16.5■□□□□ 0.23
PRPF8-202ENST00000571346 ARMT1Q9H993 441 aa16.5■□□□□ 0.23
PRPF8-202ENST00000571346 GINM1Q9NU53 330 aa16.5■□□□□ 0.23
PRPF8-202ENST00000571346 MCM9Q9NXL9 1143 aa16.5■□□□□ 0.23
PRPF8-202ENST00000571346 MYH8P13535 1937 aa16.49■□□□□ 0.23
PRPF8-202ENST00000571346 ADD2P35612 726 aa16.49■□□□□ 0.23
PRPF8-202ENST00000571346 PLCD1P51178 756 aa16.49■□□□□ 0.23
PRPF8-202ENST00000571346 RRP1P56182 461 aaKnown RBP16.49■□□□□ 0.23
PRPF8-202ENST00000571346 CERKLQ49MI3 558 aaPredicted RBP16.49■□□□□ 0.23
PRPF8-202ENST00000571346 GPATCH3Q96I76 525 aa16.49■□□□□ 0.23
PRPF8-202ENST00000571346 GABRQQ9UN88 632 aa16.49■□□□□ 0.23
PRPF8-202ENST00000571346 GCLCP48506 637 aaPredicted RBP16.48■□□□□ 0.23
PRPF8-202ENST00000571346 MTFR1Q15390 333 aa16.48■□□□□ 0.23
PRPF8-202ENST00000571346 ABCB5Q2M3G0 1257 aa16.48■□□□□ 0.23
PRPF8-202ENST00000571346 PRPF38BQ5VTL8 546 aaKnown RBP16.48■□□□□ 0.23
PRPF8-202ENST00000571346 TSHZ3Q63HK5 1081 aa16.48■□□□□ 0.23
PRPF8-202ENST00000571346 TATDN1Q6P1N9 297 aa16.48■□□□□ 0.23
PRPF8-202ENST00000571346 SLAIN1Q8ND83 568 aa16.48■□□□□ 0.23
PRPF8-202ENST00000571346 ECHDC1Q9NTX5 307 aa16.48■□□□□ 0.23
PRPF8-202ENST00000571346 BAZ2AQ9UIF9 1905 aaKnown RBP16.48■□□□□ 0.23
PRPF8-202ENST00000571346 C19orf81C9J6K1 198 aa16.47■□□□□ 0.23
PRPF8-202ENST00000571346 MPHOSPH10O00566 681 aaKnown RBP16.47■□□□□ 0.23
PRPF8-202ENST00000571346 CHGBP05060 677 aa16.47■□□□□ 0.23
PRPF8-202ENST00000571346 ELNP15502 786 aa16.47■□□□□ 0.23
PRPF8-202ENST00000571346 SHMT1P34896 483 aa16.47■□□□□ 0.23
PRPF8-202ENST00000571346 FLT3LGP49771 235 aa16.47■□□□□ 0.23
PRPF8-202ENST00000571346 EVX2Q03828 476 aa16.47■□□□□ 0.23
PRPF8-202ENST00000571346 COA7Q96BR5 231 aa16.47■□□□□ 0.23
PRPF8-202ENST00000571346 CABP5Q9NP86 173 aa16.47■□□□□ 0.23
PRPF8-202ENST00000571346 DCP1AQ9NPI6 582 aaPredicted RBP16.47■□□□□ 0.23
PRPF8-202ENST00000571346 CYP2D6P10635 497 aa16.46■□□□□ 0.23
PRPF8-202ENST00000571346 HERVK_113P62684 666 aa16.46■□□□□ 0.23
PRPF8-202ENST00000571346 UBXN2AP68543 259 aa16.46■□□□□ 0.23
PRPF8-202ENST00000571346 USP17L2Q6R6M4 530 aa16.46■□□□□ 0.23
PRPF8-202ENST00000571346 DCTPP1Q9H773 170 aa16.46■□□□□ 0.23
PRPF8-202ENST00000571346 PRKAB2O43741 272 aa16.45■□□□□ 0.22
PRPF8-202ENST00000571346 ADCY3O60266 1144 aa16.45■□□□□ 0.22
PRPF8-202ENST00000571346 ZSCAN25Q6NSZ9 544 aa16.45■□□□□ 0.22
PRPF8-202ENST00000571346 AMOTL1Q8IY63 956 aa16.45■□□□□ 0.22
PRPF8-202ENST00000571346 SLC44A5Q8NCS7 719 aa16.45■□□□□ 0.22
PRPF8-202ENST00000571346 DDRGK1Q96HY6 314 aa16.45■□□□□ 0.22
PRPF8-202ENST00000571346 PAGR1Q9BTK6 254 aa16.45■□□□□ 0.22
PRPF8-202ENST00000571346 PEX10O60683 326 aa16.44■□□□□ 0.22
PRPF8-202ENST00000571346 INHAP05111 366 aa16.44■□□□□ 0.22
PRPF8-202ENST00000571346 CCL5P13501 91 aa16.44■□□□□ 0.22
PRPF8-202ENST00000571346 HOXA7P31268 230 aaPredicted RBP16.44■□□□□ 0.22
PRPF8-202ENST00000571346 USP14P54578 494 aa16.44■□□□□ 0.22
PRPF8-202ENST00000571346 UBE3CQ15386 1083 aa16.44■□□□□ 0.22
PRPF8-202ENST00000571346 ACER1Q8TDN7 264 aa16.44■□□□□ 0.22
PRPF8-202ENST00000571346 P2RX7Q99572 595 aaKnown RBP16.44■□□□□ 0.22
PRPF8-202ENST00000571346 RNF208Q9H0X6 261 aa16.44■□□□□ 0.22
PRPF8-202ENST00000571346 EMILIN3Q9NT22 766 aa16.44■□□□□ 0.22
PRPF8-202ENST00000571346 PCDHB15Q9Y5E8 787 aa16.44■□□□□ 0.22
PRPF8-202ENST00000571346 VCAM1P19320 739 aa16.43■□□□□ 0.22
PRPF8-202ENST00000571346 GABPAQ06546 454 aa16.43■□□□□ 0.22
PRPF8-202ENST00000571346 SEPT2Q15019 361 aa16.43■□□□□ 0.22
PRPF8-202ENST00000571346 DYNLL2Q96FJ2 89 aa16.43■□□□□ 0.22
PRPF8-202ENST00000571346 SLC4A4Q9Y6R1 1079 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms