RNA–Protein interactions for RNA: ENST00000571309.1

PSMB6-202, Transcript of proteasome subunit beta 6, humanhuman

TSL 3

Gene PSMB6, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6-202ENST00000571309 MTMR2Q13614 643 aa16.79■□□□□ 0.28
PSMB6-202ENST00000571309 SHROOM1Q2M3G4 852 aaPredicted RBP16.79■□□□□ 0.28
PSMB6-202ENST00000571309 MIGA1Q8NAN2 632 aa16.79■□□□□ 0.28
PSMB6-202ENST00000571309 RHPN1Q8TCX5 695 aa16.79■□□□□ 0.28
PSMB6-202ENST00000571309 COA7Q96BR5 231 aa16.79■□□□□ 0.28
PSMB6-202ENST00000571309 ZBTB21Q9ULJ3 1066 aa16.79■□□□□ 0.28
PSMB6-202ENST00000571309 C19orf81C9J6K1 198 aa16.78■□□□□ 0.28
PSMB6-202ENST00000571309 GDF11O95390 407 aa16.78■□□□□ 0.28
PSMB6-202ENST00000571309 ELNP15502 786 aa16.78■□□□□ 0.28
PSMB6-202ENST00000571309 HOXA7P31268 230 aaPredicted RBP16.78■□□□□ 0.28
PSMB6-202ENST00000571309 HABP4Q5JVS0 413 aaKnown RBP16.78■□□□□ 0.28
PSMB6-202ENST00000571309 UBE2Q1Q7Z7E8 422 aa16.78■□□□□ 0.28
PSMB6-202ENST00000571309 RPAP2Q8IXW5 612 aaPredicted RBP16.78■□□□□ 0.28
PSMB6-202ENST00000571309 UNC93B1Q9H1C4 597 aa16.78■□□□□ 0.28
PSMB6-202ENST00000571309 IL1RAPL2Q9NP60 686 aa16.78■□□□□ 0.28
PSMB6-202ENST00000571309 TMOD4Q9NZQ9 345 aa16.78■□□□□ 0.28
PSMB6-202ENST00000571309 USP17L10C9JJH3 530 aa16.77■□□□□ 0.28
PSMB6-202ENST00000571309 INHAP05111 366 aa16.77■□□□□ 0.28
PSMB6-202ENST00000571309 USP5P45974 858 aa16.77■□□□□ 0.28
PSMB6-202ENST00000571309 U2AF1L4Q8WU68 220 aaKnown RBP16.77■□□□□ 0.28
PSMB6-202ENST00000571309 KIF1BPQ96EK5 621 aa16.77■□□□□ 0.28
PSMB6-202ENST00000571309 EHD4Q9H223 541 aa16.77■□□□□ 0.28
PSMB6-202ENST00000571309 ZBTB40Q9NUA8 1239 aa16.77■□□□□ 0.28
PSMB6-202ENST00000571309 PCDH10Q9P2E7 1040 aa16.77■□□□□ 0.28
PSMB6-202ENST00000571309 MORF4L1Q9UBU8 362 aa16.77■□□□□ 0.28
PSMB6-202ENST00000571309 DDX19BQ9UMR2 479 aa16.77■□□□□ 0.28
PSMB6-202ENST00000571309 IRX3P78415 501 aaPredicted RBP16.76■□□□□ 0.27
PSMB6-202ENST00000571309 TTF1Q15361 905 aaPredicted RBP16.76■□□□□ 0.27
PSMB6-202ENST00000571309 TATDN1Q6P1N9 297 aa16.76■□□□□ 0.27
PSMB6-202ENST00000571309 SIRT2Q8IXJ6 389 aa16.76■□□□□ 0.27
PSMB6-202ENST00000571309 CLASRPQ8N2M8 674 aaKnown RBP16.76■□□□□ 0.27
PSMB6-202ENST00000571309 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.76■□□□□ 0.27
PSMB6-202ENST00000571309 RIOK1Q9BRS2 568 aaKnown RBP16.76■□□□□ 0.27
PSMB6-202ENST00000571309 HMMRO75330 724 aa16.75■□□□□ 0.27
PSMB6-202ENST00000571309 SGPL1O95470 568 aa16.75■□□□□ 0.27
PSMB6-202ENST00000571309 CAPN2P17655 700 aa16.75■□□□□ 0.27
PSMB6-202ENST00000571309 P2RX7Q99572 595 aaKnown RBP16.75■□□□□ 0.27
PSMB6-202ENST00000571309 SERPINB13Q9UIV8 391 aa16.75■□□□□ 0.27
PSMB6-202ENST00000571309 GJD2Q9UKL4 321 aa16.75■□□□□ 0.27
PSMB6-202ENST00000571309 COG6Q9Y2V7 657 aa16.75■□□□□ 0.27
PSMB6-202ENST00000571309 DDX60LQ5H9U9 1706 aaKnown RBP16.75■□□□□ 0.27
PSMB6-202ENST00000571309 H0YGN5 161 aa16.74■□□□□ 0.27
PSMB6-202ENST00000571309 GH2P01242 217 aa16.74■□□□□ 0.27
PSMB6-202ENST00000571309 HERVK_113P62684 666 aa16.74■□□□□ 0.27
PSMB6-202ENST00000571309 USP17L2Q6R6M4 530 aa16.74■□□□□ 0.27
PSMB6-202ENST00000571309 TTC6Q86TZ1 520 aa16.74■□□□□ 0.27
PSMB6-202ENST00000571309 PAK6Q9NQU5 681 aaPredicted RBP16.74■□□□□ 0.27
PSMB6-202ENST00000571309 EMILIN3Q9NT22 766 aa16.74■□□□□ 0.27
PSMB6-202ENST00000571309 TAOK2Q9UL54 1235 aa16.74■□□□□ 0.27
PSMB6-202ENST00000571309 CEP290O15078 2479 aa16.74■□□□□ 0.27
PSMB6-202ENST00000571309 PLXNB2O15031 1838 aa16.73■□□□□ 0.27
PSMB6-202ENST00000571309 MAGEB6P1A0A0J9YX57 407 aa16.73■□□□□ 0.27
PSMB6-202ENST00000571309 RAB11FIP3O75154 756 aa16.73■□□□□ 0.27
PSMB6-202ENST00000571309 PDE6AP16499 860 aa16.73■□□□□ 0.27
PSMB6-202ENST00000571309 SLC9C2Q5TAH2 1124 aa16.73■□□□□ 0.27
PSMB6-202ENST00000571309 CHMP4BQ9H444 224 aaKnown RBP16.73■□□□□ 0.27
PSMB6-202ENST00000571309 TXNRD2Q9NNW7 524 aa16.73■□□□□ 0.27
PSMB6-202ENST00000571309 RCAN3Q9UKA8 241 aa16.73■□□□□ 0.27
PSMB6-202ENST00000571309 NAV1Q8NEY1 1877 aa16.72■□□□□ 0.27
PSMB6-202ENST00000571309 APBB1O00213 710 aa16.72■□□□□ 0.27
PSMB6-202ENST00000571309 FARP2O94887 1054 aaPredicted RBP16.72■□□□□ 0.27
PSMB6-202ENST00000571309 IFIT2P09913 472 aaKnown RBP16.72■□□□□ 0.27
PSMB6-202ENST00000571309 PLCD1P51178 756 aa16.72■□□□□ 0.27
PSMB6-202ENST00000571309 GPRC5AQ8NFJ5 357 aa16.72■□□□□ 0.27
PSMB6-202ENST00000571309 DPF3Q92784 378 aa16.72■□□□□ 0.27
PSMB6-202ENST00000571309 C12orf42Q96LP6 360 aa16.72■□□□□ 0.27
PSMB6-202ENST00000571309 DEFB118Q96PH6 123 aa16.72■□□□□ 0.27
PSMB6-202ENST00000571309 HTATIP2Q9BUP3 242 aa16.72■□□□□ 0.27
PSMB6-202ENST00000571309 CRISPLD2Q9H0B8 497 aa16.72■□□□□ 0.27
PSMB6-202ENST00000571309 RBPJLQ9UBG7 517 aa16.72■□□□□ 0.27
PSMB6-202ENST00000571309 COLQQ9Y215 455 aaPredicted RBP16.72■□□□□ 0.27
PSMB6-202ENST00000571309 TCRBV5S4A2TA0A5A2 114 aa16.71■□□□□ 0.27
PSMB6-202ENST00000571309 GOLIM4O00461 696 aa16.71■□□□□ 0.27
PSMB6-202ENST00000571309 HMGCRP04035 888 aa16.71■□□□□ 0.27
PSMB6-202ENST00000571309 SHMT1P34896 483 aa16.71■□□□□ 0.27
PSMB6-202ENST00000571309 ABCB5Q2M3G0 1257 aa16.71■□□□□ 0.27
PSMB6-202ENST00000571309 CERKLQ49MI3 558 aaPredicted RBP16.71■□□□□ 0.27
PSMB6-202ENST00000571309 GTF3C2Q8WUA4 911 aaPredicted RBP16.71■□□□□ 0.27
PSMB6-202ENST00000571309 CRNKL1Q9BZJ0 848 aaKnown RBP16.71■□□□□ 0.27
PSMB6-202ENST00000571309 ZNF532Q9HCE3 1301 aa16.7■□□□□ 0.26
PSMB6-202ENST00000571309 PEX10O60683 326 aa16.7■□□□□ 0.26
PSMB6-202ENST00000571309 TFRCP02786 760 aaKnown RBP16.7■□□□□ 0.26
PSMB6-202ENST00000571309 GABPAQ06546 454 aa16.7■□□□□ 0.26
PSMB6-202ENST00000571309 POTEEQ6S8J3 1075 aa16.7■□□□□ 0.26
PSMB6-202ENST00000571309 DNAJC2Q99543 621 aaKnown RBP16.7■□□□□ 0.26
PSMB6-202ENST00000571309 FEZ1Q99689 392 aa16.7■□□□□ 0.26
PSMB6-202ENST00000571309 KIAA1683Q9H0B3 1180 aa16.7■□□□□ 0.26
PSMB6-202ENST00000571309 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.7■□□□□ 0.26
PSMB6-202ENST00000571309 POLR3DP05423 398 aaPredicted RBP16.69■□□□□ 0.26
PSMB6-202ENST00000571309 MAPK4P31152 587 aa16.69■□□□□ 0.26
PSMB6-202ENST00000571309 ERVK-9P63128 1117 aa16.69■□□□□ 0.26
PSMB6-202ENST00000571309 ERVK-24P63145 666 aa16.69■□□□□ 0.26
PSMB6-202ENST00000571309 RAB3GAP1Q15042 981 aa16.69■□□□□ 0.26
PSMB6-202ENST00000571309 Q3C1V9 767 aa16.69■□□□□ 0.26
PSMB6-202ENST00000571309 SOCS4Q8WXH5 440 aa16.69■□□□□ 0.26
PSMB6-202ENST00000571309 EDC3Q96F86 508 aaKnown RBP16.69■□□□□ 0.26
PSMB6-202ENST00000571309 CABP5Q9NP86 173 aa16.69■□□□□ 0.26
PSMB6-202ENST00000571309 USP17L15C9J2P7 530 aa16.68■□□□□ 0.26
PSMB6-202ENST00000571309 USP17L13C9JLJ4 530 aa16.68■□□□□ 0.26
PSMB6-202ENST00000571309 USP17L11C9JVI0 530 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms