RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 CERS4Q9HA82 394 aa8.95□□□□□ -0.98
CHD3-213ENST00000571249 EP300Q09472 2414 aaPredicted RBP8.94□□□□□ -0.98
CHD3-213ENST00000571249 SPEF2Q9C093 1822 aa8.94□□□□□ -0.98
CHD3-213ENST00000571249 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.94□□□□□ -0.98
CHD3-213ENST00000571249 PER1O15534 1290 aaPredicted RBP8.94□□□□□ -0.98
CHD3-213ENST00000571249 PCCAP05165 728 aaPredicted RBP8.94□□□□□ -0.98
CHD3-213ENST00000571249 CHRM1P11229 460 aaPredicted RBP8.94□□□□□ -0.98
CHD3-213ENST00000571249 CTSWP56202 376 aa8.94□□□□□ -0.98
CHD3-213ENST00000571249 RAB30Q15771 203 aa8.94□□□□□ -0.98
CHD3-213ENST00000571249 ZNF365Q70YC5 407 aa8.94□□□□□ -0.98
CHD3-213ENST00000571249 ASCL5Q7RTU5 278 aa8.94□□□□□ -0.98
CHD3-213ENST00000571249 FAM83AQ86UY5 434 aa8.94□□□□□ -0.98
CHD3-213ENST00000571249 HOOK2Q96ED9 719 aa8.94□□□□□ -0.98
CHD3-213ENST00000571249 ZFP91Q96JP5 570 aaPredicted RBP8.94□□□□□ -0.98
CHD3-213ENST00000571249 MFSD14AQ96MC6 490 aa8.94□□□□□ -0.98
CHD3-213ENST00000571249 ANKRD2Q9GZV1 360 aa8.94□□□□□ -0.98
CHD3-213ENST00000571249 TMEM39AQ9NV64 488 aa8.94□□□□□ -0.98
CHD3-213ENST00000571249 AGTPBP1Q9UPW5 1226 aa8.94□□□□□ -0.98
CHD3-213ENST00000571249 VPS13AQ96RL7 3174 aa8.94□□□□□ -0.98
CHD3-213ENST00000571249 FRMPD3Q5JV73 1810 aa8.94□□□□□ -0.98
CHD3-213ENST00000571249 PQBP1O60828 265 aaKnown RBP8.93□□□□□ -0.98
CHD3-213ENST00000571249 IL9P15248 144 aa8.93□□□□□ -0.98
CHD3-213ENST00000571249 POU3F3P20264 500 aaPredicted RBP8.93□□□□□ -0.98
CHD3-213ENST00000571249 IGHMBP2P38935 993 aaKnown RBP8.93□□□□□ -0.98
CHD3-213ENST00000571249 CHRNDQ07001 517 aa8.93□□□□□ -0.98
CHD3-213ENST00000571249 TCP10Q12799 353 aa8.93□□□□□ -0.98
CHD3-213ENST00000571249 FAM212AQ96EL1 285 aa8.93□□□□□ -0.98
CHD3-213ENST00000571249 TXNRD2Q9NNW7 524 aa8.93□□□□□ -0.98
CHD3-213ENST00000571249 TECTAO75443 2155 aa8.93□□□□□ -0.98
CHD3-213ENST00000571249 PHF20L1A8MW92 1017 aa8.92□□□□□ -0.98
CHD3-213ENST00000571249 NEFMP07197 916 aa8.92□□□□□ -0.98
CHD3-213ENST00000571249 GCLCP48506 637 aaPredicted RBP8.92□□□□□ -0.98
CHD3-213ENST00000571249 Q3C1V9 767 aa8.92□□□□□ -0.98
CHD3-213ENST00000571249 MORN1Q5T089 497 aa8.92□□□□□ -0.98
CHD3-213ENST00000571249 C1orf53Q5VUE5 145 aa8.92□□□□□ -0.98
CHD3-213ENST00000571249 PPP2R2DQ66LE6 453 aa8.92□□□□□ -0.98
CHD3-213ENST00000571249 APOBEC3HQ6NTF7 200 aaKnown RBP8.92□□□□□ -0.98
CHD3-213ENST00000571249 ZNF804AQ7Z570 1209 aa8.92□□□□□ -0.98
CHD3-213ENST00000571249 TRMT44Q8IYL2 757 aaKnown RBP8.92□□□□□ -0.98
CHD3-213ENST00000571249 MYD88Q99836 296 aa8.92□□□□□ -0.98
CHD3-213ENST00000571249 ASCC2Q9H1I8 757 aaPredicted RBP8.92□□□□□ -0.98
CHD3-213ENST00000571249 ALG13Q9NP73 1137 aaKnown RBP8.92□□□□□ -0.98
CHD3-213ENST00000571249 PICK1Q9NRD5 415 aa8.92□□□□□ -0.98
CHD3-213ENST00000571249 DMXL1Q9Y485 3027 aa8.92□□□□□ -0.98
CHD3-213ENST00000571249 ZFYVE26Q68DK2 2539 aa8.92□□□□□ -0.98
CHD3-213ENST00000571249 COL4A6Q14031 1691 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 MAST4O15021 2626 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 FAM208BQ5VWN6 2430 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 KBTBD13C9JR72 458 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 CSF2RAP15509 400 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 CYP2C19P33261 490 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 RGS2P41220 211 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 FAAP100Q0VG06 881 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 NFE2L2Q16236 605 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 C15orf52Q6ZUT6 534 aaKnown RBP8.91□□□□□ -0.98
CHD3-213ENST00000571249 ZFPM1Q8IX07 1006 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 SCYL3Q8IZE3 742 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 SLC44A5Q8NCS7 719 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 ARRDC4Q8NCT1 418 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 CCDC191Q8NCU4 936 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.91□□□□□ -0.98
CHD3-213ENST00000571249 SOCS4Q8WXH5 440 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 ATOH1Q92858 354 aaPredicted RBP8.91□□□□□ -0.98
CHD3-213ENST00000571249 PORCNQ9H237 461 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 CWC25Q9NXE8 425 aaPredicted RBP8.91□□□□□ -0.98
CHD3-213ENST00000571249 DBF4Q9UBU7 674 aaPredicted RBP8.91□□□□□ -0.98
CHD3-213ENST00000571249 MORF4L1Q9UBU8 362 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 PNMA3Q9UL41 463 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 TRPC6Q9Y210 931 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 NDUFB9Q9Y6M9 179 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 A0A0G2JMZ2 1700 aa8.91□□□□□ -0.98
CHD3-213ENST00000571249 CEP250Q9BV73 2442 aa8.9□□□□□ -0.98
CHD3-213ENST00000571249 TIMP1P01033 207 aa8.9□□□□□ -0.98
CHD3-213ENST00000571249 HOXB3P14651 431 aaPredicted RBP8.9□□□□□ -0.98
CHD3-213ENST00000571249 HDGFL1Q5TGJ6 251 aa8.9□□□□□ -0.98
CHD3-213ENST00000571249 FKBP1CQ5VVH2 108 aa8.9□□□□□ -0.98
CHD3-213ENST00000571249 MFSD14CQ5VZR4 134 aa8.9□□□□□ -0.98
CHD3-213ENST00000571249 GBF1Q92538 1859 aa8.89□□□□□ -0.99
CHD3-213ENST00000571249 ATRNL1Q5VV63 1379 aa8.89□□□□□ -0.99
CHD3-213ENST00000571249 MSCO60682 206 aa8.89□□□□□ -0.99
CHD3-213ENST00000571249 GOLGA2Q08379 1002 aa8.89□□□□□ -0.99
CHD3-213ENST00000571249 NFIAQ12857 509 aa8.89□□□□□ -0.99
CHD3-213ENST00000571249 LRRC41Q15345 812 aa8.89□□□□□ -0.99
CHD3-213ENST00000571249 MFSD5Q6N075 450 aa8.89□□□□□ -0.99
CHD3-213ENST00000571249 GPR142Q7Z601 462 aa8.89□□□□□ -0.99
CHD3-213ENST00000571249 TDRD7Q8NHU6 1098 aaKnown RBP8.89□□□□□ -0.99
CHD3-213ENST00000571249 FAM151AQ8WW52 585 aa8.89□□□□□ -0.99
CHD3-213ENST00000571249 EDC3Q96F86 508 aaKnown RBP8.89□□□□□ -0.99
CHD3-213ENST00000571249 MPHOSPH8Q99549 860 aa8.89□□□□□ -0.99
CHD3-213ENST00000571249 APBA2Q99767 749 aa8.89□□□□□ -0.99
CHD3-213ENST00000571249 HYPKQ9NX55 129 aa8.89□□□□□ -0.99
CHD3-213ENST00000571249 TMOD2Q9NZR1 351 aa8.89□□□□□ -0.99
CHD3-213ENST00000571249 PTPRFP10586 1907 aa8.89□□□□□ -0.99
CHD3-213ENST00000571249 UTYO14607 1347 aa8.88□□□□□ -0.99
CHD3-213ENST00000571249 GAKO14976 1311 aa8.88□□□□□ -0.99
CHD3-213ENST00000571249 MYBBP1AQ9BQG0 1328 aaKnown RBP8.88□□□□□ -0.99
CHD3-213ENST00000571249 ITGA6P23229 1130 aa8.88□□□□□ -0.99
CHD3-213ENST00000571249 PLEKHH3Q7Z736 793 aa8.88□□□□□ -0.99
CHD3-213ENST00000571249 GPRC5AQ8NFJ5 357 aa8.88□□□□□ -0.99
CHD3-213ENST00000571249 TEKT1Q969V4 418 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms