RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 NUCB1Q02818 461 aa16.13■□□□□ 0.17
CCDC40-205ENST00000571028 ECHDC1Q9NTX5 307 aa16.13■□□□□ 0.17
CCDC40-205ENST00000571028 MGAMO43451 1857 aa16.12■□□□□ 0.17
CCDC40-205ENST00000571028 PHF20L1A8MW92 1017 aa16.12■□□□□ 0.17
CCDC40-205ENST00000571028 GOLIM4O00461 696 aa16.12■□□□□ 0.17
CCDC40-205ENST00000571028 MAP4K4O95819 1239 aaPredicted RBP16.12■□□□□ 0.17
CCDC40-205ENST00000571028 CYP2E1P05181 493 aaPredicted RBP16.12■□□□□ 0.17
CCDC40-205ENST00000571028 RGS3P49796 1198 aa16.12■□□□□ 0.17
CCDC40-205ENST00000571028 PABPC4Q13310 644 aaKnown RBP eCLIP16.12■□□□□ 0.17
CCDC40-205ENST00000571028 ERICH6Q7L0X2 663 aa16.12■□□□□ 0.17
CCDC40-205ENST00000571028 DZIP1Q86YF9 867 aaKnown RBP16.12■□□□□ 0.17
CCDC40-205ENST00000571028 ZFPM1Q8IX07 1006 aa16.12■□□□□ 0.17
CCDC40-205ENST00000571028 ZGPATQ8N5A5 531 aaKnown RBP16.12■□□□□ 0.17
CCDC40-205ENST00000571028 EDC3Q96F86 508 aaKnown RBP16.12■□□□□ 0.17
CCDC40-205ENST00000571028 ZNF512BQ96KM6 892 aaPredicted RBP16.12■□□□□ 0.17
CCDC40-205ENST00000571028 ANTXR1Q9H6X2 564 aa16.12■□□□□ 0.17
CCDC40-205ENST00000571028 PIH1D3Q9NQM4 214 aaKnown RBP16.12■□□□□ 0.17
CCDC40-205ENST00000571028 CTNND1O60716 968 aaKnown RBP16.11■□□□□ 0.17
CCDC40-205ENST00000571028 ENTPD3O75355 529 aa16.11■□□□□ 0.17
CCDC40-205ENST00000571028 ATP5JP18859 108 aa16.11■□□□□ 0.17
CCDC40-205ENST00000571028 MX1P20591 662 aa16.11■□□□□ 0.17
CCDC40-205ENST00000571028 GCLCP48506 637 aaPredicted RBP16.11■□□□□ 0.17
CCDC40-205ENST00000571028 SPTY2D1Q68D10 685 aaPredicted RBP16.11■□□□□ 0.17
CCDC40-205ENST00000571028 IDH1O75874 414 aaKnown RBP16.1■□□□□ 0.17
CCDC40-205ENST00000571028 TREML2Q5T2D2 321 aa16.1■□□□□ 0.17
CCDC40-205ENST00000571028 PPP4R2Q9NY27 417 aa16.1■□□□□ 0.17
CCDC40-205ENST00000571028 PDS5AQ29RF7 1337 aaKnown RBP16.1■□□□□ 0.17
CCDC40-205ENST00000571028 SALL1Q9NSC2 1324 aa16.1■□□□□ 0.17
CCDC40-205ENST00000571028 ATRNL1Q5VV63 1379 aa16.1■□□□□ 0.17
CCDC40-205ENST00000571028 UNC80Q8N2C7 3258 aa16.09■□□□□ 0.17
CCDC40-205ENST00000571028 ERC2O15083 957 aa16.09■□□□□ 0.17
CCDC40-205ENST00000571028 PICALMQ13492 652 aa16.09■□□□□ 0.17
CCDC40-205ENST00000571028 CENPQQ7L2Z9 268 aaPredicted RBP16.09■□□□□ 0.17
CCDC40-205ENST00000571028 PROCA1Q8NCQ7 364 aaPredicted RBP16.09■□□□□ 0.17
CCDC40-205ENST00000571028 IDI2Q9BXS1 227 aa16.09■□□□□ 0.17
CCDC40-205ENST00000571028 PAG1Q9NWQ8 432 aa16.09■□□□□ 0.17
CCDC40-205ENST00000571028 OGDHLQ9ULD0 1010 aa16.09■□□□□ 0.17
CCDC40-205ENST00000571028 AK9Q5TCS8 1911 aa16.09■□□□□ 0.17
CCDC40-205ENST00000571028 PDE1AP54750 535 aa16.08■□□□□ 0.16
CCDC40-205ENST00000571028 MDM2Q00987 491 aaPredicted RBP16.08■□□□□ 0.16
CCDC40-205ENST00000571028 MECOMQ03112 1051 aa16.08■□□□□ 0.16
CCDC40-205ENST00000571028 TRIM32Q13049 653 aa16.08■□□□□ 0.16
CCDC40-205ENST00000571028 CCDC84Q86UT8 332 aaPredicted RBP16.08■□□□□ 0.16
CCDC40-205ENST00000571028 SLF2Q8IX21 1173 aa16.08■□□□□ 0.16
CCDC40-205ENST00000571028 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.08■□□□□ 0.16
CCDC40-205ENST00000571028 FAM161BQ96MY7 647 aa16.08■□□□□ 0.16
CCDC40-205ENST00000571028 HAUS7Q99871 368 aa16.08■□□□□ 0.16
CCDC40-205ENST00000571028 LBHD1Q9BQE6 289 aaPredicted RBP16.08■□□□□ 0.16
CCDC40-205ENST00000571028 TTC41PQ6P2S7 1318 aa16.08■□□□□ 0.16
CCDC40-205ENST00000571028 MYH13Q9UKX3 1938 aa16.07■□□□□ 0.16
CCDC40-205ENST00000571028 GLRX3O76003 335 aaKnown RBP16.07■□□□□ 0.16
CCDC40-205ENST00000571028 PRKAR2AP13861 404 aaKnown RBP16.07■□□□□ 0.16
CCDC40-205ENST00000571028 PDE4AP27815 886 aa16.07■□□□□ 0.16
CCDC40-205ENST00000571028 TTF1Q15361 905 aaPredicted RBP16.07■□□□□ 0.16
CCDC40-205ENST00000571028 SKAP1Q86WV1 359 aa16.07■□□□□ 0.16
CCDC40-205ENST00000571028 PLEKHM2Q8IWE5 1019 aa16.07■□□□□ 0.16
CCDC40-205ENST00000571028 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.07■□□□□ 0.16
CCDC40-205ENST00000571028 ALPK3Q96L96 1907 aa16.06■□□□□ 0.16
CCDC40-205ENST00000571028 PFASO15067 1338 aa16.06■□□□□ 0.16
CCDC40-205ENST00000571028 CYP2B6P20813 491 aa16.06■□□□□ 0.16
CCDC40-205ENST00000571028 SPP2Q13103 211 aa16.06■□□□□ 0.16
CCDC40-205ENST00000571028 ZNF697Q5TEC3 545 aa16.06■□□□□ 0.16
CCDC40-205ENST00000571028 ERICH6BQ5W0A0 696 aa16.06■□□□□ 0.16
CCDC40-205ENST00000571028 FAM109BQ6ICB4 259 aaPredicted RBP16.06■□□□□ 0.16
CCDC40-205ENST00000571028 NAA16Q6N069 864 aaPredicted RBP16.06■□□□□ 0.16
CCDC40-205ENST00000571028 CCAR1Q8IX12 1150 aaKnown RBP16.06■□□□□ 0.16
CCDC40-205ENST00000571028 PI4K2BQ8TCG2 481 aa16.06■□□□□ 0.16
CCDC40-205ENST00000571028 TRIB2Q92519 343 aa16.06■□□□□ 0.16
CCDC40-205ENST00000571028 DOCK2Q92608 1830 aa16.05■□□□□ 0.16
CCDC40-205ENST00000571028 DDX60LQ5H9U9 1706 aaKnown RBP16.05■□□□□ 0.16
CCDC40-205ENST00000571028 SALL3Q9BXA9 1300 aa16.05■□□□□ 0.16
CCDC40-205ENST00000571028 DDTLA6NHG4 134 aaPredicted RBP16.05■□□□□ 0.16
CCDC40-205ENST00000571028 ZBTB22O15209 634 aa16.05■□□□□ 0.16
CCDC40-205ENST00000571028 LDHCP07864 332 aa16.05■□□□□ 0.16
CCDC40-205ENST00000571028 ZKSCAN1P17029 563 aaPredicted RBP16.05■□□□□ 0.16
CCDC40-205ENST00000571028 CYP7A1P22680 504 aa16.05■□□□□ 0.16
CCDC40-205ENST00000571028 HMGCS2P54868 508 aa16.05■□□□□ 0.16
CCDC40-205ENST00000571028 IRX3P78415 501 aaPredicted RBP16.05■□□□□ 0.16
CCDC40-205ENST00000571028 GSTO1P78417 241 aa16.05■□□□□ 0.16
CCDC40-205ENST00000571028 MAP3K12Q12852 859 aa16.05■□□□□ 0.16
CCDC40-205ENST00000571028 SH3BP5LQ7L8J4 393 aa16.05■□□□□ 0.16
CCDC40-205ENST00000571028 TRMT44Q8IYL2 757 aaKnown RBP16.05■□□□□ 0.16
CCDC40-205ENST00000571028 MAGEB6Q8N7X4 407 aa16.05■□□□□ 0.16
CCDC40-205ENST00000571028 ZNF280CQ8ND82 737 aa16.05■□□□□ 0.16
CCDC40-205ENST00000571028 SOCS4Q8WXH5 440 aa16.05■□□□□ 0.16
CCDC40-205ENST00000571028 NSUN4Q96CB9 384 aaKnown RBP16.05■□□□□ 0.16
CCDC40-205ENST00000571028 GUCD1Q96NT3 240 aa16.05■□□□□ 0.16
CCDC40-205ENST00000571028 NUDT12Q9BQG2 462 aa16.05■□□□□ 0.16
CCDC40-205ENST00000571028 TBC1D2Q9BYX2 928 aa16.05■□□□□ 0.16
CCDC40-205ENST00000571028 ASCC2Q9H1I8 757 aaPredicted RBP16.05■□□□□ 0.16
CCDC40-205ENST00000571028 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.05■□□□□ 0.16
CCDC40-205ENST00000571028 GJD2Q9UKL4 321 aa16.05■□□□□ 0.16
CCDC40-205ENST00000571028 TRIM6-TRIM34B2RNG4 842 aa16.04■□□□□ 0.16
CCDC40-205ENST00000571028 MAP3K10Q02779 954 aa16.04■□□□□ 0.16
CCDC40-205ENST00000571028 SLFNL1Q499Z3 407 aa16.04■□□□□ 0.16
CCDC40-205ENST00000571028 ZNF384Q8TF68 577 aa16.04■□□□□ 0.16
CCDC40-205ENST00000571028 OSBPL5Q9H0X9 879 aaPredicted RBP16.04■□□□□ 0.16
CCDC40-205ENST00000571028 CWC22Q9HCG8 908 aaKnown RBP16.04■□□□□ 0.16
CCDC40-205ENST00000571028 PRKAG2Q9UGJ0 569 aa16.04■□□□□ 0.16
CCDC40-205ENST00000571028 MROH7-TTC4A0A0A0MT08 1334 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms