RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 PSMC4P43686 418 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 BACE1P56817 501 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 MLLT1Q03111 559 aaPredicted RBP6.54□□□□□ -1.36
CHD3-212ENST00000570758 GABPAQ06546 454 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 MTMR2Q13614 643 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 KIF22Q14807 665 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 UBE3CQ15386 1083 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 SH3D19Q5HYK7 790 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 TATDN1Q6P1N9 297 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 TTC6Q86TZ1 520 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 PROCA1Q8NCQ7 364 aaPredicted RBP6.54□□□□□ -1.36
CHD3-212ENST00000570758 SLC44A5Q8NCS7 719 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 ARMC5Q96C12 935 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 TBC1D2Q9BYX2 928 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 EHD4Q9H223 541 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 AS3MTQ9HBK9 375 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 DCP1AQ9NPI6 582 aaPredicted RBP6.54□□□□□ -1.36
CHD3-212ENST00000570758 GINM1Q9NU53 330 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 SERPINB13Q9UIV8 391 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 LOC285556D6RIA3 1793 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 NAV1Q8NEY1 1877 aa6.53□□□□□ -1.36
CHD3-212ENST00000570758 CYP2D7A0A087X1C5 515 aa6.53□□□□□ -1.36
CHD3-212ENST00000570758 POTEFA5A3E0 1075 aa6.53□□□□□ -1.36
CHD3-212ENST00000570758 PEX10O60683 326 aa6.53□□□□□ -1.36
CHD3-212ENST00000570758 FMNL1O95466 1100 aaPredicted RBP6.53□□□□□ -1.36
CHD3-212ENST00000570758 POLR3DP05423 398 aaPredicted RBP6.53□□□□□ -1.36
CHD3-212ENST00000570758 ARHGEF6Q15052 776 aa6.53□□□□□ -1.36
CHD3-212ENST00000570758 CERKLQ49MI3 558 aaPredicted RBP6.53□□□□□ -1.36
CHD3-212ENST00000570758 ANKRD13CQ8N6S4 541 aa6.53□□□□□ -1.36
CHD3-212ENST00000570758 KBTBD3Q8NAB2 608 aa6.53□□□□□ -1.36
CHD3-212ENST00000570758 PI4K2BQ8TCG2 481 aa6.53□□□□□ -1.36
CHD3-212ENST00000570758 ACER1Q8TDN7 264 aa6.53□□□□□ -1.36
CHD3-212ENST00000570758 SH3TC2Q8TF17 1288 aa6.53□□□□□ -1.36
CHD3-212ENST00000570758 DYNLL2Q96FJ2 89 aa6.53□□□□□ -1.36
CHD3-212ENST00000570758 GPATCH3Q96I76 525 aa6.53□□□□□ -1.36
CHD3-212ENST00000570758 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.53□□□□□ -1.36
CHD3-212ENST00000570758 PUS7LQ9H0K6 701 aaKnown RBP6.53□□□□□ -1.36
CHD3-212ENST00000570758 ASCC2Q9H1I8 757 aaPredicted RBP6.53□□□□□ -1.36
CHD3-212ENST00000570758 EMILIN3Q9NT22 766 aa6.53□□□□□ -1.36
CHD3-212ENST00000570758 SRRDQ9UH36 339 aa6.53□□□□□ -1.36
CHD3-212ENST00000570758 GABRQQ9UN88 632 aa6.53□□□□□ -1.36
CHD3-212ENST00000570758 SALL3Q9BXA9 1300 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 C19orf81C9J6K1 198 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 USP17L10C9JJH3 530 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 MYCP01106 439 aaPredicted RBP6.52□□□□□ -1.37
CHD3-212ENST00000570758 GNRH1P01148 92 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 EN2P19622 333 aaPredicted RBP6.52□□□□□ -1.37
CHD3-212ENST00000570758 HOXA7P31268 230 aaPredicted RBP6.52□□□□□ -1.37
CHD3-212ENST00000570758 PRMT2P55345 433 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 FCGRTP55899 365 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 PRKCZQ05513 592 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 HDAC1Q13547 482 aaPredicted RBP6.52□□□□□ -1.37
CHD3-212ENST00000570758 SEPT2Q15019 361 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 RAB3GAP1Q15042 981 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 ZYXQ15942 572 aaKnown RBP6.52□□□□□ -1.37
CHD3-212ENST00000570758 ABCB5Q2M3G0 1257 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 SLC9C1Q4G0N8 1177 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 ANKRD45Q5TZF3 282 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 C12orf60Q5U649 245 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 ZSCAN25Q6NSZ9 544 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 USP17L2Q6R6M4 530 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 POTEEQ6S8J3 1075 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 EXOC6Q8TAG9 804 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 SMCR8Q8TEV9 937 aaPredicted RBP6.52□□□□□ -1.37
CHD3-212ENST00000570758 APPBP2Q92624 585 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 OSBP2Q969R2 916 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 ZNF333Q96JL9 665 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 STRBPQ96SI9 672 aaKnown RBP6.52□□□□□ -1.37
CHD3-212ENST00000570758 P2RX7Q99572 595 aaKnown RBP6.52□□□□□ -1.37
CHD3-212ENST00000570758 ATP8A2Q9NTI2 1148 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 TMOD4Q9NZQ9 345 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 PNMA3Q9UL41 463 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 SLC4A4Q9Y6R1 1079 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 MYH7P12883 1935 aa6.52□□□□□ -1.37
CHD3-212ENST00000570758 TTC41PQ6P2S7 1318 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 MYPNQ86TC9 1320 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 A0A1W2PRG0 241 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 GSG1L2A8MUP6 293 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 USP17L12C9JPN9 530 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 USP17L21D6R901 530 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 M0R2C6 588 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 RNF113AO15541 343 aaKnown RBP6.51□□□□□ -1.37
CHD3-212ENST00000570758 GLRX3O76003 335 aaKnown RBP6.51□□□□□ -1.37
CHD3-212ENST00000570758 IGHDP01880 384 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 AKR1B1P15121 316 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 HOXD10P28358 340 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 GCLCP48506 637 aaPredicted RBP6.51□□□□□ -1.37
CHD3-212ENST00000570758 HERVK_113P62684 666 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 IRX3P78415 501 aaPredicted RBP6.51□□□□□ -1.37
CHD3-212ENST00000570758 PABPC4Q13310 644 aaKnown RBP eCLIP6.51□□□□□ -1.37
CHD3-212ENST00000570758 MTFR1Q15390 333 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 CTR9Q6PD62 1173 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 CLEC10AQ8IUN9 316 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 SIAH1Q8IUQ4 282 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 RAET1EQ8TD07 263 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 C12orf42Q96LP6 360 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 KIAA1683Q9H0B3 1180 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 EPB41L4AQ9HCS5 686 aaPredicted RBP6.51□□□□□ -1.37
CHD3-212ENST00000570758 TXNRD2Q9NNW7 524 aa6.51□□□□□ -1.37
CHD3-212ENST00000570758 CABP5Q9NP86 173 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms