RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 GJD2Q9UKL4 321 aa18.06■□□□□ 0.48
NDE1-203ENST00000570727 IDH1O75874 414 aaKnown RBP18.05■□□□□ 0.48
NDE1-203ENST00000570727 GDF11O95390 407 aa18.05■□□□□ 0.48
NDE1-203ENST00000570727 HOXA7P31268 230 aaPredicted RBP18.05■□□□□ 0.48
NDE1-203ENST00000570727 FXR1P51114 621 aaKnown RBP eCLIP18.05■□□□□ 0.48
NDE1-203ENST00000570727 DIEXFQ68CQ4 756 aaKnown RBP18.05■□□□□ 0.48
NDE1-203ENST00000570727 CRACR2BQ8N4Y2 399 aaPredicted RBP18.05■□□□□ 0.48
NDE1-203ENST00000570727 P2RX7Q99572 595 aaKnown RBP18.05■□□□□ 0.48
NDE1-203ENST00000570727 MORF4L1Q9UBU8 362 aa18.05■□□□□ 0.48
NDE1-203ENST00000570727 EXOC6BQ9Y2D4 811 aa18.05■□□□□ 0.48
NDE1-203ENST00000570727 PLXNB2O15031 1838 aa18.05■□□□□ 0.48
NDE1-203ENST00000570727 C19orf81C9J6K1 198 aa18.04■□□□□ 0.48
NDE1-203ENST00000570727 MAGEB6Q8N7X4 407 aa18.04■□□□□ 0.48
NDE1-203ENST00000570727 MIGA1Q8NAN2 632 aa18.04■□□□□ 0.48
NDE1-203ENST00000570727 PAK6Q9NQU5 681 aaPredicted RBP18.04■□□□□ 0.48
NDE1-203ENST00000570727 GINM1Q9NU53 330 aa18.04■□□□□ 0.48
NDE1-203ENST00000570727 TAOK2Q9UL54 1235 aa18.04■□□□□ 0.48
NDE1-203ENST00000570727 TRIOBPQ9H2D6 2365 aa18.04■□□□□ 0.48
NDE1-203ENST00000570727 SZT2Q5T011 3432 aa18.04■□□□□ 0.48
NDE1-203ENST00000570727 USP17L10C9JJH3 530 aa18.03■□□□□ 0.48
NDE1-203ENST00000570727 PEX10O60683 326 aa18.03■□□□□ 0.48
NDE1-203ENST00000570727 AACSQ86V21 672 aa18.03■□□□□ 0.48
NDE1-203ENST00000570727 DEFB118Q96PH6 123 aa18.03■□□□□ 0.48
NDE1-203ENST00000570727 TMOD4Q9NZQ9 345 aa18.03■□□□□ 0.48
NDE1-203ENST00000570727 ZBTB21Q9ULJ3 1066 aa18.03■□□□□ 0.48
NDE1-203ENST00000570727 ZBED9Q6R2W3 1325 aa18.02■□□□□ 0.48
NDE1-203ENST00000570727 FARP2O94887 1054 aaPredicted RBP18.02■□□□□ 0.48
NDE1-203ENST00000570727 TFRCP02786 760 aaKnown RBP18.02■□□□□ 0.48
NDE1-203ENST00000570727 HLA-DOAP06340 250 aa18.02■□□□□ 0.48
NDE1-203ENST00000570727 TATDN1Q6P1N9 297 aa18.02■□□□□ 0.48
NDE1-203ENST00000570727 POTEEQ6S8J3 1075 aa18.02■□□□□ 0.48
NDE1-203ENST00000570727 ERC1Q8IUD2 1116 aa18.02■□□□□ 0.48
NDE1-203ENST00000570727 HTATIP2Q9BUP3 242 aa18.02■□□□□ 0.48
NDE1-203ENST00000570727 TRIM34Q9BYJ4 488 aa18.02■□□□□ 0.48
NDE1-203ENST00000570727 CRISPLD2Q9H0B8 497 aa18.02■□□□□ 0.48
NDE1-203ENST00000570727 TXNRD2Q9NNW7 524 aa18.02■□□□□ 0.48
NDE1-203ENST00000570727 EMILIN3Q9NT22 766 aa18.02■□□□□ 0.48
NDE1-203ENST00000570727 RBPJLQ9UBG7 517 aa18.02■□□□□ 0.48
NDE1-203ENST00000570727 CAPN2P17655 700 aa18.01■□□□□ 0.47
NDE1-203ENST00000570727 USP5P45974 858 aa18.01■□□□□ 0.47
NDE1-203ENST00000570727 HERVK_113P62684 666 aa18.01■□□□□ 0.47
NDE1-203ENST00000570727 IRX3P78415 501 aaPredicted RBP18.01■□□□□ 0.47
NDE1-203ENST00000570727 MAP3K12Q12852 859 aa18.01■□□□□ 0.47
NDE1-203ENST00000570727 Q3C1V9 767 aa18.01■□□□□ 0.47
NDE1-203ENST00000570727 RHPN1Q8TCX5 695 aa18.01■□□□□ 0.47
NDE1-203ENST00000570727 IL1RAPL2Q9NP60 686 aa18.01■□□□□ 0.47
NDE1-203ENST00000570727 GH2P01242 217 aa18■□□□□ 0.47
NDE1-203ENST00000570727 TRIM32Q13049 653 aa18■□□□□ 0.47
NDE1-203ENST00000570727 TMED8Q6PL24 325 aaPredicted RBP18■□□□□ 0.47
NDE1-203ENST00000570727 CHRDL2Q6WN34 429 aa18■□□□□ 0.47
NDE1-203ENST00000570727 CERS3Q8IU89 383 aa18■□□□□ 0.47
NDE1-203ENST00000570727 GPRC5AQ8NFJ5 357 aa18■□□□□ 0.47
NDE1-203ENST00000570727 RIOK1Q9BRS2 568 aaKnown RBP18■□□□□ 0.47
NDE1-203ENST00000570727 HSP90AB4PQ58FF6 505 aa17.99■□□□□ 0.47
NDE1-203ENST00000570727 USP17L2Q6R6M4 530 aa17.99■□□□□ 0.47
NDE1-203ENST00000570727 SIRT2Q8IXJ6 389 aa17.99■□□□□ 0.47
NDE1-203ENST00000570727 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.99■□□□□ 0.47
NDE1-203ENST00000570727 EHD4Q9H223 541 aa17.99■□□□□ 0.47
NDE1-203ENST00000570727 SERPINB13Q9UIV8 391 aa17.99■□□□□ 0.47
NDE1-203ENST00000570727 HMGCRP04035 888 aa17.98■□□□□ 0.47
NDE1-203ENST00000570727 PLCD1P51178 756 aa17.98■□□□□ 0.47
NDE1-203ENST00000570727 PRO3102Q9H379 93 aa17.98■□□□□ 0.47
NDE1-203ENST00000570727 RBM27Q9P2N5 1060 aaKnown RBP17.98■□□□□ 0.47
NDE1-203ENST00000570727 CYP2B6P20813 491 aa17.97■□□□□ 0.47
NDE1-203ENST00000570727 CERKLQ49MI3 558 aaPredicted RBP17.97■□□□□ 0.47
NDE1-203ENST00000570727 TTC6Q86TZ1 520 aa17.97■□□□□ 0.47
NDE1-203ENST00000570727 RPAP2Q8IXW5 612 aaPredicted RBP17.97■□□□□ 0.47
NDE1-203ENST00000570727 TRIB2Q92519 343 aa17.97■□□□□ 0.47
NDE1-203ENST00000570727 PAWRQ96IZ0 340 aaKnown RBP17.97■□□□□ 0.47
NDE1-203ENST00000570727 C12orf42Q96LP6 360 aa17.97■□□□□ 0.47
NDE1-203ENST00000570727 ZBTB40Q9NUA8 1239 aa17.97■□□□□ 0.47
NDE1-203ENST00000570727 NR2E3Q9Y5X4 410 aa17.97■□□□□ 0.47
NDE1-203ENST00000570727 ALPK3Q96L96 1907 aa17.97■□□□□ 0.47
NDE1-203ENST00000570727 RPTORQ8N122 1335 aa17.97■□□□□ 0.47
NDE1-203ENST00000570727 MAGEB6P1A0A0J9YX57 407 aa17.96■□□□□ 0.47
NDE1-203ENST00000570727 MS4A1P11836 297 aa17.96■□□□□ 0.47
NDE1-203ENST00000570727 GUCY1A2P33402 732 aa17.96■□□□□ 0.47
NDE1-203ENST00000570727 SHMT1P34896 483 aa17.96■□□□□ 0.47
NDE1-203ENST00000570727 ERVK-9P63128 1117 aa17.96■□□□□ 0.47
NDE1-203ENST00000570727 ERVK-24P63145 666 aa17.96■□□□□ 0.47
NDE1-203ENST00000570727 TTF1Q15361 905 aaPredicted RBP17.96■□□□□ 0.47
NDE1-203ENST00000570727 SLC9C2Q5TAH2 1124 aa17.96■□□□□ 0.47
NDE1-203ENST00000570727 ACER1Q8TDN7 264 aa17.96■□□□□ 0.47
NDE1-203ENST00000570727 DIS3LQ8TF46 1054 aaKnown RBP17.96■□□□□ 0.47
NDE1-203ENST00000570727 USP6NLQ92738 828 aa17.96■□□□□ 0.47
NDE1-203ENST00000570727 PORCNQ9H237 461 aa17.96■□□□□ 0.47
NDE1-203ENST00000570727 HMX1Q9NP08 348 aaPredicted RBP17.96■□□□□ 0.47
NDE1-203ENST00000570727 COG6Q9Y2V7 657 aa17.96■□□□□ 0.47
NDE1-203ENST00000570727 TCRBV5S4A2TA0A5A2 114 aa17.95■□□□□ 0.46
NDE1-203ENST00000570727 APBB1O00213 710 aa17.95■□□□□ 0.46
NDE1-203ENST00000570727 XRCC5P13010 732 aaKnown RBP17.95■□□□□ 0.46
NDE1-203ENST00000570727 PDE6AP16499 860 aa17.95■□□□□ 0.46
NDE1-203ENST00000570727 MNX1P50219 401 aaPredicted RBP17.95■□□□□ 0.46
NDE1-203ENST00000570727 EVX2Q03828 476 aa17.95■□□□□ 0.46
NDE1-203ENST00000570727 GABPAQ06546 454 aa17.95■□□□□ 0.46
NDE1-203ENST00000570727 ZYXQ15942 572 aaKnown RBP17.95■□□□□ 0.46
NDE1-203ENST00000570727 ABCB5Q2M3G0 1257 aa17.95■□□□□ 0.46
NDE1-203ENST00000570727 MAP3K21Q5TCX8 1036 aa17.95■□□□□ 0.46
NDE1-203ENST00000570727 CLASRPQ8N2M8 674 aaKnown RBP17.95■□□□□ 0.46
NDE1-203ENST00000570727 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms