RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 SRCIN1Q9C0H9 1055 aa9.06□□□□□ -0.96
SMG6-205ENST00000570659 USP44Q9H0E7 712 aa9.06□□□□□ -0.96
SMG6-205ENST00000570659 SIL1Q9H173 461 aa9.06□□□□□ -0.96
SMG6-205ENST00000570659 PRDM5Q9NQX1 630 aaPredicted RBP9.06□□□□□ -0.96
SMG6-205ENST00000570659 EMILIN3Q9NT22 766 aa9.06□□□□□ -0.96
SMG6-205ENST00000570659 PA2G4Q9UQ80 394 aaKnown RBP9.06□□□□□ -0.96
SMG6-205ENST00000570659 GBF1Q92538 1859 aa9.06□□□□□ -0.96
SMG6-205ENST00000570659 MYO5AQ9Y4I1 1855 aaKnown RBP9.06□□□□□ -0.96
SMG6-205ENST00000570659 SALL1Q9NSC2 1324 aa9.05□□□□□ -0.96
SMG6-205ENST00000570659 EYA2O00167 538 aa9.05□□□□□ -0.96
SMG6-205ENST00000570659 GDF11O95390 407 aa9.05□□□□□ -0.96
SMG6-205ENST00000570659 CYBAP13498 195 aa9.05□□□□□ -0.96
SMG6-205ENST00000570659 CAPN2P17655 700 aa9.05□□□□□ -0.96
SMG6-205ENST00000570659 ERVK-9P63128 1117 aa9.05□□□□□ -0.96
SMG6-205ENST00000570659 ERVK-24P63145 666 aa9.05□□□□□ -0.96
SMG6-205ENST00000570659 IRX5P78411 483 aaPredicted RBP9.05□□□□□ -0.96
SMG6-205ENST00000570659 SNX17Q15036 470 aa9.05□□□□□ -0.96
SMG6-205ENST00000570659 PRAMEF19Q5SWL8 479 aa9.05□□□□□ -0.96
SMG6-205ENST00000570659 SLC39A5Q6ZMH5 540 aa9.05□□□□□ -0.96
SMG6-205ENST00000570659 TBC1D9Q6ZT07 1266 aa9.05□□□□□ -0.96
SMG6-205ENST00000570659 C16orf59Q7L2K0 433 aa9.05□□□□□ -0.96
SMG6-205ENST00000570659 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMG6-205ENST00000570659 BTBD7Q9P203 1132 aa9.05□□□□□ -0.96
SMG6-205ENST00000570659 DDX20Q9UHI6 824 aaKnown RBP9.05□□□□□ -0.96
SMG6-205ENST00000570659 SMCHD1A6NHR9 2005 aa9.05□□□□□ -0.96
SMG6-205ENST00000570659 TBC1D12O60347 775 aa9.04□□□□□ -0.96
SMG6-205ENST00000570659 IFIT1P09914 478 aaKnown RBP9.04□□□□□ -0.96
SMG6-205ENST00000570659 MECOMQ03112 1051 aa9.04□□□□□ -0.96
SMG6-205ENST00000570659 EVX2Q03828 476 aa9.04□□□□□ -0.96
SMG6-205ENST00000570659 CCDC85BQ15834 202 aaPredicted RBP9.04□□□□□ -0.96
SMG6-205ENST00000570659 CCDC27Q2M243 656 aa9.04□□□□□ -0.96
SMG6-205ENST00000570659 ADGRA1Q86SQ6 560 aa9.04□□□□□ -0.96
SMG6-205ENST00000570659 GPRC5AQ8NFJ5 357 aa9.04□□□□□ -0.96
SMG6-205ENST00000570659 LPIN2Q92539 896 aa9.04□□□□□ -0.96
SMG6-205ENST00000570659 LENG1Q96BZ8 264 aaPredicted RBP9.04□□□□□ -0.96
SMG6-205ENST00000570659 FAM122AQ96E09 287 aa9.04□□□□□ -0.96
SMG6-205ENST00000570659 APBA2Q99767 749 aa9.04□□□□□ -0.96
SMG6-205ENST00000570659 EPHX3Q9H6B9 360 aa9.04□□□□□ -0.96
SMG6-205ENST00000570659 C11orf16Q9NQ32 467 aa9.04□□□□□ -0.96
SMG6-205ENST00000570659 PNMA3Q9UL41 463 aa9.04□□□□□ -0.96
SMG6-205ENST00000570659 MYO9BQ13459 2157 aa9.04□□□□□ -0.96
SMG6-205ENST00000570659 MROH7-TTC4A0A0A0MT08 1334 aa9.04□□□□□ -0.96
SMG6-205ENST00000570659 GPR75-ASB3A0A0A6YYF3 556 aa9.03□□□□□ -0.96
SMG6-205ENST00000570659 DNM1LO00429 736 aa9.03□□□□□ -0.96
SMG6-205ENST00000570659 SLC5A1P13866 664 aa9.03□□□□□ -0.96
SMG6-205ENST00000570659 DNAJB2P25686 324 aa9.03□□□□□ -0.96
SMG6-205ENST00000570659 HOXA7P31268 230 aaPredicted RBP9.03□□□□□ -0.96
SMG6-205ENST00000570659 ADCYAP1R1P41586 468 aa9.03□□□□□ -0.96
SMG6-205ENST00000570659 BACE1P56817 501 aa9.03□□□□□ -0.96
SMG6-205ENST00000570659 TFF2Q03403 129 aa9.03□□□□□ -0.96
SMG6-205ENST00000570659 TLE2Q04725 743 aa9.03□□□□□ -0.96
SMG6-205ENST00000570659 MAP2K5Q13163 448 aa9.03□□□□□ -0.96
SMG6-205ENST00000570659 PDE3AQ14432 1141 aa9.03□□□□□ -0.96
SMG6-205ENST00000570659 ATP2B3Q16720 1220 aa9.03□□□□□ -0.96
SMG6-205ENST00000570659 CCDC102BQ68D86 513 aa9.03□□□□□ -0.96
SMG6-205ENST00000570659 PLEKHH3Q7Z736 793 aa9.03□□□□□ -0.96
SMG6-205ENST00000570659 SH3RF3Q8TEJ3 882 aaPredicted RBP9.03□□□□□ -0.96
SMG6-205ENST00000570659 SOCS4Q8WXH5 440 aa9.03□□□□□ -0.96
SMG6-205ENST00000570659 ASB2Q96Q27 587 aa9.03□□□□□ -0.96
SMG6-205ENST00000570659 OSBPL5Q9H0X9 879 aaPredicted RBP9.03□□□□□ -0.96
SMG6-205ENST00000570659 PRDM12Q9H4Q4 367 aa9.03□□□□□ -0.96
SMG6-205ENST00000570659 FOCADQ5VW36 1801 aa9.03□□□□□ -0.96
SMG6-205ENST00000570659 IL16Q14005 1332 aa9.03□□□□□ -0.96
SMG6-205ENST00000570659 USP17L5A8MUK1 530 aa9.02□□□□□ -0.97
SMG6-205ENST00000570659 COBLO75128 1261 aa9.02□□□□□ -0.97
SMG6-205ENST00000570659 CNGA1P29973 690 aa9.02□□□□□ -0.97
SMG6-205ENST00000570659 RGS2P41220 211 aa9.02□□□□□ -0.97
SMG6-205ENST00000570659 KCNQ1P51787 676 aa9.02□□□□□ -0.97
SMG6-205ENST00000570659 TIMM10P62072 90 aa9.02□□□□□ -0.97
SMG6-205ENST00000570659 IRX3P78415 501 aaPredicted RBP9.02□□□□□ -0.97
SMG6-205ENST00000570659 ZYXQ15942 572 aaKnown RBP9.02□□□□□ -0.97
SMG6-205ENST00000570659 FAM47AQ5JRC9 791 aa9.02□□□□□ -0.97
SMG6-205ENST00000570659 LPAR1Q92633 364 aa9.02□□□□□ -0.97
SMG6-205ENST00000570659 SYMPKQ92797 1274 aaKnown RBP9.02□□□□□ -0.97
SMG6-205ENST00000570659 FAM163AQ96GL9 167 aaPredicted RBP9.02□□□□□ -0.97
SMG6-205ENST00000570659 RNPC3Q96LT9 517 aaKnown RBP9.02□□□□□ -0.97
SMG6-205ENST00000570659 WDR18Q9BV38 432 aa9.02□□□□□ -0.97
SMG6-205ENST00000570659 ZNF576Q9H609 170 aa9.02□□□□□ -0.97
SMG6-205ENST00000570659 ABCF2Q9UG63 623 aa9.02□□□□□ -0.97
SMG6-205ENST00000570659 A0A0G2JMZ2 1700 aa9.01□□□□□ -0.97
SMG6-205ENST00000570659 TAL1P17542 331 aaPredicted RBP9.01□□□□□ -0.97
SMG6-205ENST00000570659 PTPREP23469 700 aa9.01□□□□□ -0.97
SMG6-205ENST00000570659 MAPK4P31152 587 aa9.01□□□□□ -0.97
SMG6-205ENST00000570659 ZEB1P37275 1124 aaPredicted RBP9.01□□□□□ -0.97
SMG6-205ENST00000570659 KIAA1755Q5JYT7 1200 aa9.01□□□□□ -0.97
SMG6-205ENST00000570659 MRPL50Q8N5N7 158 aaKnown RBP9.01□□□□□ -0.97
SMG6-205ENST00000570659 ACER1Q8TDN7 264 aa9.01□□□□□ -0.97
SMG6-205ENST00000570659 EDC3Q96F86 508 aaKnown RBP9.01□□□□□ -0.97
SMG6-205ENST00000570659 UHRF1Q96T88 793 aaPredicted RBP9.01□□□□□ -0.97
SMG6-205ENST00000570659 PBX4Q9BYU1 374 aa9.01□□□□□ -0.97
SMG6-205ENST00000570659 ZNF236Q9UL36 1845 aa9.01□□□□□ -0.97
SMG6-205ENST00000570659 FAM86C2PA6NEL3 165 aa9□□□□□ -0.97
SMG6-205ENST00000570659 MYCNP04198 464 aaPredicted RBP9□□□□□ -0.97
SMG6-205ENST00000570659 BMP1P13497 986 aa9□□□□□ -0.97
SMG6-205ENST00000570659 GRB14Q14449 540 aa9□□□□□ -0.97
SMG6-205ENST00000570659 LRRC41Q15345 812 aa9□□□□□ -0.97
SMG6-205ENST00000570659 DZIP1Q86YF9 867 aaKnown RBP9□□□□□ -0.97
SMG6-205ENST00000570659 NSUN4Q96CB9 384 aaKnown RBP9□□□□□ -0.97
SMG6-205ENST00000570659 BUD13Q9BRD0 619 aaKnown RBP eCLIP9□□□□□ -0.978e-7■■■■■ 32.7
SMG6-205ENST00000570659 LRFN3Q9BTN0 628 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms