RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 ZNFX1Q9P2E3 1918 aaKnown RBP14.84□□□□□ -0.03
CAPN3-220ENST00000569827 BAZ2AQ9UIF9 1905 aaKnown RBP14.84□□□□□ -0.03
CAPN3-220ENST00000569827 UNC80Q8N2C7 3258 aa14.83□□□□□ -0.03
CAPN3-220ENST00000569827 CYP2E1P05181 493 aaPredicted RBP14.83□□□□□ -0.04
CAPN3-220ENST00000569827 PRKAR2AP13861 404 aaKnown RBP14.83□□□□□ -0.04
CAPN3-220ENST00000569827 BACE1P56817 501 aa14.83□□□□□ -0.04
CAPN3-220ENST00000569827 PABPC4Q13310 644 aaKnown RBP eCLIP14.83□□□□□ -0.04
CAPN3-220ENST00000569827 OS9Q13438 667 aaPredicted RBP14.83□□□□□ -0.04
CAPN3-220ENST00000569827 ZYXQ15942 572 aaKnown RBP14.83□□□□□ -0.04
CAPN3-220ENST00000569827 TNNI3KQ59H18 835 aa14.83□□□□□ -0.04
CAPN3-220ENST00000569827 SH3D19Q5HYK7 790 aa14.83□□□□□ -0.04
CAPN3-220ENST00000569827 POTEEQ6S8J3 1075 aa14.83□□□□□ -0.04
CAPN3-220ENST00000569827 CRACR2BQ8N4Y2 399 aaPredicted RBP14.83□□□□□ -0.04
CAPN3-220ENST00000569827 TMEM57Q8N5G2 664 aa14.83□□□□□ -0.04
CAPN3-220ENST00000569827 ARHGAP45Q92619 1136 aa14.83□□□□□ -0.04
CAPN3-220ENST00000569827 PORCNQ9H237 461 aa14.83□□□□□ -0.04
CAPN3-220ENST00000569827 AS3MTQ9HBK9 375 aa14.83□□□□□ -0.04
CAPN3-220ENST00000569827 PIH1D3Q9NQM4 214 aaKnown RBP14.83□□□□□ -0.04
CAPN3-220ENST00000569827 TMOD4Q9NZQ9 345 aa14.83□□□□□ -0.04
CAPN3-220ENST00000569827 PI4KBQ9UBF8 816 aa14.83□□□□□ -0.04
CAPN3-220ENST00000569827 HERC5Q9UII4 1024 aaKnown RBP14.83□□□□□ -0.04
CAPN3-220ENST00000569827 FPGT-TNNI3KV9GXZ4 949 aa14.83□□□□□ -0.04
CAPN3-220ENST00000569827 RPTORQ8N122 1335 aa14.83□□□□□ -0.04
CAPN3-220ENST00000569827 UQCRFS1P1P0C7P4 283 aa14.82□□□□□ -0.04
CAPN3-220ENST00000569827 ZAP70P43403 619 aa14.82□□□□□ -0.04
CAPN3-220ENST00000569827 HERVK_113P62684 666 aa14.82□□□□□ -0.04
CAPN3-220ENST00000569827 CCL14Q16627 93 aa14.82□□□□□ -0.04
CAPN3-220ENST00000569827 ATF7IPQ6VMQ6 1270 aa14.82□□□□□ -0.04
CAPN3-220ENST00000569827 MORF4L1Q9UBU8 362 aa14.82□□□□□ -0.04
CAPN3-220ENST00000569827 ZBTB21Q9ULJ3 1066 aa14.82□□□□□ -0.04
CAPN3-220ENST00000569827 COL11A1P12107 1806 aaPredicted RBP14.82□□□□□ -0.04
CAPN3-220ENST00000569827 PARP14Q460N5 1801 aa14.81□□□□□ -0.04
CAPN3-220ENST00000569827 EYSQ5T1H1 3165 aa14.81□□□□□ -0.04
CAPN3-220ENST00000569827 ASNSP08243 561 aa14.81□□□□□ -0.04
CAPN3-220ENST00000569827 CCND3P30281 292 aaPredicted RBP14.81□□□□□ -0.04
CAPN3-220ENST00000569827 Q3C1V9 767 aa14.81□□□□□ -0.04
CAPN3-220ENST00000569827 Q7L0L9 218 aa14.81□□□□□ -0.04
CAPN3-220ENST00000569827 MIGA1Q8NAN2 632 aa14.81□□□□□ -0.04
CAPN3-220ENST00000569827 GDF15Q99988 308 aa14.81□□□□□ -0.04
CAPN3-220ENST00000569827 WDR18Q9BV38 432 aa14.81□□□□□ -0.04
CAPN3-220ENST00000569827 TRIM34Q9BYJ4 488 aa14.81□□□□□ -0.04
CAPN3-220ENST00000569827 PFASO15067 1338 aa14.81□□□□□ -0.04
CAPN3-220ENST00000569827 RLFQ13129 1914 aa14.8□□□□□ -0.04
CAPN3-220ENST00000569827 SMCHD1A6NHR9 2005 aa14.8□□□□□ -0.04
CAPN3-220ENST00000569827 BAG3O95817 575 aa14.8□□□□□ -0.04
CAPN3-220ENST00000569827 MAP4K4O95819 1239 aaPredicted RBP14.8□□□□□ -0.04
CAPN3-220ENST00000569827 TBC1D2Q9BYX2 928 aa14.8□□□□□ -0.04
CAPN3-220ENST00000569827 NBPF3Q9H094 633 aa14.8□□□□□ -0.04
CAPN3-220ENST00000569827 CCDC8Q9H0W5 538 aaPredicted RBP14.8□□□□□ -0.04
CAPN3-220ENST00000569827 C11orf49Q9H6J7 331 aa14.8□□□□□ -0.04
CAPN3-220ENST00000569827 EMILIN3Q9NT22 766 aa14.8□□□□□ -0.04
CAPN3-220ENST00000569827 RBPJLQ9UBG7 517 aa14.8□□□□□ -0.04
CAPN3-220ENST00000569827 LTBP2Q14767 1821 aa14.8□□□□□ -0.04
CAPN3-220ENST00000569827 MYH7P12883 1935 aa14.8□□□□□ -0.04
CAPN3-220ENST00000569827 USP17L10C9JJH3 530 aa14.79□□□□□ -0.04
CAPN3-220ENST00000569827 SURF6O75683 361 aaKnown RBP14.79□□□□□ -0.04
CAPN3-220ENST00000569827 GH2P01242 217 aa14.79□□□□□ -0.04
CAPN3-220ENST00000569827 CYP7A1P22680 504 aa14.79□□□□□ -0.04
CAPN3-220ENST00000569827 MAGEA10P43363 369 aaPredicted RBP14.79□□□□□ -0.04
CAPN3-220ENST00000569827 ERVK-9P63128 1117 aa14.79□□□□□ -0.04
CAPN3-220ENST00000569827 ERVK-24P63145 666 aa14.79□□□□□ -0.04
CAPN3-220ENST00000569827 CACNB2Q08289 660 aaPredicted RBP14.79□□□□□ -0.04
CAPN3-220ENST00000569827 POLA2Q14181 598 aa14.79□□□□□ -0.04
CAPN3-220ENST00000569827 CCDC158Q5M9N0 1113 aa14.79□□□□□ -0.04
CAPN3-220ENST00000569827 SLC17A8Q8NDX2 589 aa14.79□□□□□ -0.04
CAPN3-220ENST00000569827 GPRC5AQ8NFJ5 357 aa14.79□□□□□ -0.04
CAPN3-220ENST00000569827 NUDT12Q9BQG2 462 aa14.79□□□□□ -0.04
CAPN3-220ENST00000569827 DHX36Q9H2U1 1008 aaKnown RBP14.79□□□□□ -0.04
CAPN3-220ENST00000569827 DBNLQ9UJU6 430 aaKnown RBP14.79□□□□□ -0.04
CAPN3-220ENST00000569827 IDH1O75874 414 aaKnown RBP14.78□□□□□ -0.04
CAPN3-220ENST00000569827 ZKSCAN1P17029 563 aaPredicted RBP14.78□□□□□ -0.04
CAPN3-220ENST00000569827 HOXA7P31268 230 aaPredicted RBP14.78□□□□□ -0.04
CAPN3-220ENST00000569827 PPP4CP60510 307 aa14.78□□□□□ -0.04
CAPN3-220ENST00000569827 EVX2Q03828 476 aa14.78□□□□□ -0.04
CAPN3-220ENST00000569827 MAP3K21Q5TCX8 1036 aa14.78□□□□□ -0.04
CAPN3-220ENST00000569827 GPR142Q7Z601 462 aa14.78□□□□□ -0.04
CAPN3-220ENST00000569827 ANKLE1Q8NAG6 615 aa14.78□□□□□ -0.04
CAPN3-220ENST00000569827 OGDHLQ9ULD0 1010 aa14.78□□□□□ -0.04
CAPN3-220ENST00000569827 PLXNA1Q9UIW2 1896 aa14.78□□□□□ -0.04
CAPN3-220ENST00000569827 A0A1W2PPC1 479 aa14.77□□□□□ -0.05
CAPN3-220ENST00000569827 DLL1O00548 723 aa14.77□□□□□ -0.05
CAPN3-220ENST00000569827 IPO8O15397 1037 aaKnown RBP14.77□□□□□ -0.05
CAPN3-220ENST00000569827 CNMDO75829 334 aa14.77□□□□□ -0.05
CAPN3-220ENST00000569827 PLCG2P16885 1265 aa14.77□□□□□ -0.05
CAPN3-220ENST00000569827 PDE3AQ14432 1141 aa14.77□□□□□ -0.05
CAPN3-220ENST00000569827 WDR78Q5VTH9 848 aa14.77□□□□□ -0.05
CAPN3-220ENST00000569827 CCAR1Q8IX12 1150 aaKnown RBP14.77□□□□□ -0.05
CAPN3-220ENST00000569827 MAGEB6Q8N7X4 407 aa14.77□□□□□ -0.05
CAPN3-220ENST00000569827 SOCS4Q8WXH5 440 aa14.77□□□□□ -0.05
CAPN3-220ENST00000569827 FEZ1Q99689 392 aa14.77□□□□□ -0.05
CAPN3-220ENST00000569827 ANTXR1Q9H6X2 564 aa14.77□□□□□ -0.05
CAPN3-220ENST00000569827 FLRT1Q9NZU1 646 aa14.77□□□□□ -0.05
CAPN3-220ENST00000569827 A0A0G2JMZ2 1700 aa14.77□□□□□ -0.05
CAPN3-220ENST00000569827 C19orf81C9J6K1 198 aa14.76□□□□□ -0.05
CAPN3-220ENST00000569827 HLA-DOAP06340 250 aa14.76□□□□□ -0.05
CAPN3-220ENST00000569827 MDM2Q00987 491 aaPredicted RBP14.76□□□□□ -0.05
CAPN3-220ENST00000569827 RAB3GAP1Q15042 981 aa14.76□□□□□ -0.05
CAPN3-220ENST00000569827 LRRC26Q2I0M4 334 aa14.76□□□□□ -0.05
CAPN3-220ENST00000569827 MORN1Q5T089 497 aa14.76□□□□□ -0.05
CAPN3-220ENST00000569827 METTL16Q86W50 562 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms