RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	CYP7A1	P22680	504 aa		13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	HIBADH	P31937	336 aa	Known RBP	13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	KCNJ6	P48051	423 aa		13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	REST	Q13127	1097 aa		13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	NBPF11	Q86T75	865 aa		13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	HOMER1	Q86YM7	354 aa		13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	MIGA1	Q8NAN2	632 aa		13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	MNS1	Q8NEH6	495 aa		13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	NKX2-3	Q8TAU0	364 aa		13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	ZNF384	Q8TF68	577 aa		13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	SMARCE1	Q969G3	411 aa		13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	AKT1S1	Q96B36	256 aa		13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	NAT10	Q9H0A0	1025 aa	Known RBP	13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	PRKAB2	O43741	272 aa		13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	SFPQ	P23246	707 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	SATB1	Q01826	763 aa		13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	ZSCAN26	Q16670	478 aa		13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	RALYL	Q86SE5	291 aa	Known RBP	13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	SMARCC2	Q8TAQ2	1214 aa		13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	RPGR	Q92834	1020 aa	Known RBP	13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	ZNF274	Q96GC6	653 aa	Predicted RBP	13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	RAI14	Q9P0K7	980 aa		13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	KIN	O60870	393 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	GNAT2	P19087	354 aa		13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	HMGB2	P26583	209 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	PDIA3	P30101	505 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	CCDC73	Q6ZRK6	1079 aa		13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	CCAR1	Q8IX12	1150 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	NSUN7	Q8NE18	718 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	NAPB	Q9H115	298 aa		13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	CWC15	Q9P013	229 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	NEDD4	P46934	1319 aa		13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	PHLPP2	Q6ZVD8	1323 aa		13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	MYH15	Q9Y2K3	1946 aa		13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	COL11A2	P13942	1736 aa	Predicted RBP	13.73	□□□□□ -0.21
SPG7-222	ENST00000569820		H3BQV1	296 aa		13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	CTDNEP1	O95476	244 aa		13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	APBA3	O96018	575 aa		13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	TPM1	P09493	284 aa		13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	OAS2	P29728	719 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	ETF1	P62495	437 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	IFFO2	Q5TF58	517 aa		13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	RIOK1	Q9BRS2	568 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	LLPH	Q9BRT6	129 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	SRRT	Q9BXP5	876 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	UBXN6	Q9BZV1	441 aa		13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	SLC4A4	Q9Y6R1	1079 aa		13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	XDH	P47989	1333 aa		13.73	□□□□□ -0.21
SPG7-222	ENST00000569820	LAMB1	P07942	1786 aa		13.72	□□□□□ -0.21
SPG7-222	ENST00000569820		A0A087WWV3	80 aa		13.72	□□□□□ -0.21
SPG7-222	ENST00000569820	MYO1C	O00159	1063 aa		13.72	□□□□□ -0.21
SPG7-222	ENST00000569820	SEC31A	O94979	1220 aa	Known RBP	13.72	□□□□□ -0.21
SPG7-222	ENST00000569820	RXRB	P28702	533 aa		13.72	□□□□□ -0.21
SPG7-222	ENST00000569820	CEBPZ	Q03701	1054 aa	Known RBP	13.72	□□□□□ -0.21
SPG7-222	ENST00000569820	DHX8	Q14562	1220 aa	Known RBP	13.72	□□□□□ -0.21
SPG7-222	ENST00000569820	DNAI1	Q9UI46	699 aa		13.72	□□□□□ -0.21
SPG7-222	ENST00000569820	LEMD3	Q9Y2U8	911 aa		13.72	□□□□□ -0.21
SPG7-222	ENST00000569820	SALL1	Q9NSC2	1324 aa		13.72	□□□□□ -0.21
SPG7-222	ENST00000569820	CCP110	O43303	1012 aa		13.72	□□□□□ -0.21
SPG7-222	ENST00000569820	TRDN	Q13061	729 aa		13.72	□□□□□ -0.21
SPG7-222	ENST00000569820	ARMCX5	Q6P1M9	558 aa		13.72	□□□□□ -0.21
SPG7-222	ENST00000569820	CYB5R4	Q7L1T6	521 aa		13.72	□□□□□ -0.21
SPG7-222	ENST00000569820	TMC6	Q7Z403	805 aa		13.72	□□□□□ -0.21
SPG7-222	ENST00000569820	COL23A1	Q86Y22	540 aa	Predicted RBP	13.72	□□□□□ -0.21
SPG7-222	ENST00000569820	C10orf67	Q8IYJ2	551 aa		13.72	□□□□□ -0.21
SPG7-222	ENST00000569820	NCOA5	Q9HCD5	579 aa	Known RBP	13.72	□□□□□ -0.21
SPG7-222	ENST00000569820	ANKIB1	Q9P2G1	1089 aa		13.72	□□□□□ -0.21
SPG7-222	ENST00000569820	TACC3	Q9Y6A5	838 aa		13.72	□□□□□ -0.21
SPG7-222	ENST00000569820	MAGEB6P1	A0A0J9YX57	407 aa		13.71	□□□□□ -0.21
SPG7-222	ENST00000569820	KLRG2	A4D1S0	409 aa	Predicted RBP	13.71	□□□□□ -0.21
SPG7-222	ENST00000569820	EFCAB8	A8MWE9	144 aa		13.71	□□□□□ -0.21
SPG7-222	ENST00000569820	TADA3	O75528	432 aa		13.71	□□□□□ -0.21
SPG7-222	ENST00000569820	SMC2	O95347	1197 aa		13.71	□□□□□ -0.21
SPG7-222	ENST00000569820	CCT2	P78371	535 aa	Known RBP	13.71	□□□□□ -0.21
SPG7-222	ENST00000569820	NBPF20	Q3BBV1	942 aa		13.71	□□□□□ -0.21
SPG7-222	ENST00000569820	EP400NL	Q6ZTU2	488 aa		13.71	□□□□□ -0.21
SPG7-222	ENST00000569820	GOLGA6L1	Q8N7Z2	621 aa		13.71	□□□□□ -0.21
SPG7-222	ENST00000569820	DDX11	Q96FC9	970 aa		13.71	□□□□□ -0.21
SPG7-222	ENST00000569820	GOLPH3L	Q9H4A5	285 aa		13.71	□□□□□ -0.21
SPG7-222	ENST00000569820	PTPDC1	A2A3K4	754 aa		13.7	□□□□□ -0.22
SPG7-222	ENST00000569820		B4E1Z4	1266 aa		13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	HOXA10	P31260	410 aa	Predicted RBP	13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	CTDSPL2	Q05D32	466 aa		13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	SMC1A	Q14683	1233 aa	Known RBP	13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	ECM29	Q5VYK3	1845 aa		13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	NAA16	Q6N069	864 aa	Predicted RBP	13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	NSUN4	Q96CB9	384 aa	Known RBP	13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	RBM17	Q96I25	401 aa	Known RBP	13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	NACAP1	Q9BZK3	213 aa		13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	ZCCHC17	Q9NP64	241 aa	Known RBP	13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	DONSON	Q9NYP3	566 aa		13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	HPS5	Q9UPZ3	1129 aa		13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	DUOX1	Q9NRD9	1551 aa		13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	KIF1C	O43896	1103 aa	Known RBP	13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	TBC1D8	O95759	1140 aa		13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	TDO2	P48775	406 aa		13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	GPSM2	P81274	684 aa		13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	MECOM	Q03112	1051 aa		13.7	□□□□□ -0.22

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