RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 TMED8Q6PL24 325 aaPredicted RBP16■□□□□ 0.15
SPG7-221ENST00000569720 METTL16Q86W50 562 aaKnown RBP16■□□□□ 0.15
SPG7-221ENST00000569720 UNC93B1Q9H1C4 597 aa16■□□□□ 0.15
SPG7-221ENST00000569720 TLR7Q9NYK1 1049 aaKnown RBP16■□□□□ 0.15
SPG7-221ENST00000569720 C19orf81C9J6K1 198 aa15.99■□□□□ 0.15
SPG7-221ENST00000569720 USP17L10C9JJH3 530 aa15.99■□□□□ 0.15
SPG7-221ENST00000569720 SGPL1O95470 568 aa15.99■□□□□ 0.15
SPG7-221ENST00000569720 DYNLL1P63167 89 aaKnown RBP15.99■□□□□ 0.15
SPG7-221ENST00000569720 MAP3K12Q12852 859 aa15.99■□□□□ 0.15
SPG7-221ENST00000569720 SAP30BPQ9UHR5 308 aaKnown RBP15.99■□□□□ 0.15
SPG7-221ENST00000569720 EXOC6BQ9Y2D4 811 aa15.99■□□□□ 0.15
SPG7-221ENST00000569720 H0YGN5 161 aa15.98■□□□□ 0.15
SPG7-221ENST00000569720 GDF11O95390 407 aa15.98■□□□□ 0.15
SPG7-221ENST00000569720 USP5P45974 858 aa15.98■□□□□ 0.15
SPG7-221ENST00000569720 AACSQ86V21 672 aa15.98■□□□□ 0.15
SPG7-221ENST00000569720 MAGEB6Q8N7X4 407 aa15.98■□□□□ 0.15
SPG7-221ENST00000569720 MIGA1Q8NAN2 632 aa15.98■□□□□ 0.15
SPG7-221ENST00000569720 PANK1Q8TE04 598 aa15.98■□□□□ 0.15
SPG7-221ENST00000569720 DNAJC18Q9H819 358 aa15.98■□□□□ 0.15
SPG7-221ENST00000569720 ZBTB21Q9ULJ3 1066 aa15.98■□□□□ 0.15
SPG7-221ENST00000569720 FARP2O94887 1054 aaPredicted RBP15.97■□□□□ 0.15
SPG7-221ENST00000569720 TFRCP02786 760 aaKnown RBP15.97■□□□□ 0.15
SPG7-221ENST00000569720 HOXA7P31268 230 aaPredicted RBP15.97■□□□□ 0.15
SPG7-221ENST00000569720 DEFB118Q96PH6 123 aa15.97■□□□□ 0.15
SPG7-221ENST00000569720 MORF4L1Q9UBU8 362 aa15.97■□□□□ 0.15
SPG7-221ENST00000569720 COLQQ9Y215 455 aaPredicted RBP15.97■□□□□ 0.15
SPG7-221ENST00000569720 NR2E3Q9Y5X4 410 aa15.97■□□□□ 0.15
SPG7-221ENST00000569720 TTF1Q15361 905 aaPredicted RBP15.96■□□□□ 0.15
SPG7-221ENST00000569720 UBE2Q1Q7Z7E8 422 aa15.96■□□□□ 0.15
SPG7-221ENST00000569720 TTC6Q86TZ1 520 aa15.96■□□□□ 0.15
SPG7-221ENST00000569720 GTF3C2Q8WUA4 911 aaPredicted RBP15.96■□□□□ 0.15
SPG7-221ENST00000569720 HMMRO75330 724 aa15.95■□□□□ 0.14
SPG7-221ENST00000569720 HMGCRP04035 888 aa15.95■□□□□ 0.14
SPG7-221ENST00000569720 HERVK_113P62684 666 aa15.95■□□□□ 0.14
SPG7-221ENST00000569720 JAG1P78504 1218 aa15.95■□□□□ 0.14
SPG7-221ENST00000569720 USP17L2Q6R6M4 530 aa15.95■□□□□ 0.14
SPG7-221ENST00000569720 CCAR1Q8IX12 1150 aaKnown RBP15.95■□□□□ 0.14
SPG7-221ENST00000569720 CLASRPQ8N2M8 674 aaKnown RBP15.95■□□□□ 0.14
SPG7-221ENST00000569720 RHPN1Q8TCX5 695 aa15.95■□□□□ 0.14
SPG7-221ENST00000569720 P2RX7Q99572 595 aaKnown RBP15.95■□□□□ 0.14
SPG7-221ENST00000569720 ANTXR1Q9H6X2 564 aa15.95■□□□□ 0.14
SPG7-221ENST00000569720 PAK6Q9NQU5 681 aaPredicted RBP15.95■□□□□ 0.14
SPG7-221ENST00000569720 SERPINB13Q9UIV8 391 aa15.95■□□□□ 0.14
SPG7-221ENST00000569720 NDUFB9Q9Y6M9 179 aa15.95■□□□□ 0.14
SPG7-221ENST00000569720 GH2P01242 217 aa15.94■□□□□ 0.14
SPG7-221ENST00000569720 RPAP2Q8IXW5 612 aaPredicted RBP15.94■□□□□ 0.14
SPG7-221ENST00000569720 GPRC5AQ8NFJ5 357 aa15.94■□□□□ 0.14
SPG7-221ENST00000569720 FEZ1Q99689 392 aa15.94■□□□□ 0.14
SPG7-221ENST00000569720 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.94■□□□□ 0.14
SPG7-221ENST00000569720 EHD4Q9H223 541 aa15.94■□□□□ 0.14
SPG7-221ENST00000569720 IL1RAPL2Q9NP60 686 aa15.94■□□□□ 0.14
SPG7-221ENST00000569720 GJD2Q9UKL4 321 aa15.94■□□□□ 0.14
SPG7-221ENST00000569720 PLXNB2O15031 1838 aa15.94■□□□□ 0.14
SPG7-221ENST00000569720 NAV1Q8NEY1 1877 aa15.93■□□□□ 0.14
SPG7-221ENST00000569720 MAPK4P31152 587 aa15.93■□□□□ 0.14
SPG7-221ENST00000569720 FXR1P51114 621 aaKnown RBP eCLIP15.93■□□□□ 0.14
SPG7-221ENST00000569720 PDE3AQ14432 1141 aa15.93■□□□□ 0.14
SPG7-221ENST00000569720 SHROOM1Q2M3G4 852 aaPredicted RBP15.93■□□□□ 0.14
SPG7-221ENST00000569720 TATDN1Q6P1N9 297 aa15.93■□□□□ 0.14
SPG7-221ENST00000569720 CHRDL2Q6WN34 429 aa15.93■□□□□ 0.14
SPG7-221ENST00000569720 KIF1BPQ96EK5 621 aa15.93■□□□□ 0.14
SPG7-221ENST00000569720 CHMP4BQ9H444 224 aaKnown RBP15.93■□□□□ 0.14
SPG7-221ENST00000569720 HMX1Q9NP08 348 aaPredicted RBP15.93■□□□□ 0.14
SPG7-221ENST00000569720 CABP5Q9NP86 173 aa15.93■□□□□ 0.14
SPG7-221ENST00000569720 DDX19BQ9UMR2 479 aa15.93■□□□□ 0.14
SPG7-221ENST00000569720 TRIOBPQ9H2D6 2365 aa15.93■□□□□ 0.14
SPG7-221ENST00000569720 MAGEB6P1A0A0J9YX57 407 aa15.92■□□□□ 0.14
SPG7-221ENST00000569720 APBB1O00213 710 aa15.92■□□□□ 0.14
SPG7-221ENST00000569720 IFIT2P09913 472 aaKnown RBP15.92■□□□□ 0.14
SPG7-221ENST00000569720 USP14P54578 494 aa15.92■□□□□ 0.14
SPG7-221ENST00000569720 RAB3GAP1Q15042 981 aa15.92■□□□□ 0.14
SPG7-221ENST00000569720 CERKLQ49MI3 558 aaPredicted RBP15.92■□□□□ 0.14
SPG7-221ENST00000569720 SOCS4Q8WXH5 440 aa15.92■□□□□ 0.14
SPG7-221ENST00000569720 NUDT12Q9BQG2 462 aa15.92■□□□□ 0.14
SPG7-221ENST00000569720 CRNKL1Q9BZJ0 848 aaKnown RBP15.92■□□□□ 0.14
SPG7-221ENST00000569720 CRISPLD2Q9H0B8 497 aa15.92■□□□□ 0.14
SPG7-221ENST00000569720 CWC22Q9HCG8 908 aaKnown RBP15.92■□□□□ 0.14
SPG7-221ENST00000569720 EMILIN3Q9NT22 766 aa15.92■□□□□ 0.14
SPG7-221ENST00000569720 RPTORQ8N122 1335 aa15.92■□□□□ 0.14
SPG7-221ENST00000569720 EVI5O60447 810 aa15.91■□□□□ 0.14
SPG7-221ENST00000569720 POLR3DP05423 398 aaPredicted RBP15.91■□□□□ 0.14
SPG7-221ENST00000569720 CYP2B6P20813 491 aa15.91■□□□□ 0.14
SPG7-221ENST00000569720 ERVK-9P63128 1117 aa15.91■□□□□ 0.14
SPG7-221ENST00000569720 ERVK-24P63145 666 aa15.91■□□□□ 0.14
SPG7-221ENST00000569720 ABCB5Q2M3G0 1257 aa15.91■□□□□ 0.14
SPG7-221ENST00000569720 SLC9C2Q5TAH2 1124 aa15.91■□□□□ 0.14
SPG7-221ENST00000569720 NECAB2Q7Z6G3 386 aa15.91■□□□□ 0.14
SPG7-221ENST00000569720 TRMT44Q8IYL2 757 aaKnown RBP15.91■□□□□ 0.14
SPG7-221ENST00000569720 ANKLE1Q8NAG6 615 aa15.91■□□□□ 0.14
SPG7-221ENST00000569720 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.91■□□□□ 0.14
SPG7-221ENST00000569720 C12orf42Q96LP6 360 aa15.91■□□□□ 0.14
SPG7-221ENST00000569720 YTHDC1Q96MU7 727 aaKnown RBP15.91■□□□□ 0.14
SPG7-221ENST00000569720 RIOK1Q9BRS2 568 aaKnown RBP15.91■□□□□ 0.14
SPG7-221ENST00000569720 PAGR1Q9BTK6 254 aa15.91■□□□□ 0.14
SPG7-221ENST00000569720 RBPJLQ9UBG7 517 aa15.91■□□□□ 0.14
SPG7-221ENST00000569720 MYH8P13535 1937 aa15.9■□□□□ 0.14
SPG7-221ENST00000569720 USP17L15C9J2P7 530 aa15.9■□□□□ 0.14
SPG7-221ENST00000569720 USP17L13C9JLJ4 530 aa15.9■□□□□ 0.14
SPG7-221ENST00000569720 USP17L11C9JVI0 530 aa15.9■□□□□ 0.14
SPG7-221ENST00000569720 USP17L18D6R9N7 530 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms