RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 SLC44A5Q8NCS7 719 aa10.82□□□□□ -0.68
CHD9-219ENST00000569225 MAP4K1Q92918 833 aa10.82□□□□□ -0.68
CHD9-219ENST00000569225 CAPNS2Q96L46 248 aa10.82□□□□□ -0.68
CHD9-219ENST00000569225 LSG1Q9H089 658 aaKnown RBP10.82□□□□□ -0.68
CHD9-219ENST00000569225 ZBTB21Q9ULJ3 1066 aa10.82□□□□□ -0.68
CHD9-219ENST00000569225 GDF11O95390 407 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 GH2P01242 217 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 HAND2P61296 217 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 EVX2Q03828 476 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 GRM1Q13255 1194 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 PPIL2Q13356 520 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 RNF20Q5VTR2 975 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 SPRYD7Q5W111 196 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 CYP4F22Q6NT55 531 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 MFSD6Q6ZSS7 791 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 TMEM179Q6ZVK1 233 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 STK11IPQ8N1F8 1099 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 OPTNQ96CV9 577 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 OTUD5Q96G74 571 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 WNK4Q96J92 1243 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 AS3MTQ9HBK9 375 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 RBM8AQ9Y5S9 174 aaKnown RBP10.81□□□□□ -0.68
CHD9-219ENST00000569225 USP17L5A8MUK1 530 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 ORC4O43929 436 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 PTPRAP18433 802 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 CTDSPL2Q05D32 466 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 AKNAD1Q5T1N1 836 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 REM2Q8IYK8 340 aaPredicted RBP10.81□□□□□ -0.68
CHD9-219ENST00000569225 STAG1Q8WVM7 1258 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 TOMM22Q9NS69 142 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 ZHX2Q9Y6X8 837 aa10.81□□□□□ -0.68
CHD9-219ENST00000569225 SMIM22K7EJ46 135 aa10.8□□□□□ -0.68
CHD9-219ENST00000569225 EPB41L2O43491 1005 aaKnown RBP10.8□□□□□ -0.68
CHD9-219ENST00000569225 PRDM1O75626 825 aa10.8□□□□□ -0.68
CHD9-219ENST00000569225 RASA1P20936 1047 aa10.8□□□□□ -0.68
CHD9-219ENST00000569225 VEGFBP49765 207 aa10.8□□□□□ -0.68
CHD9-219ENST00000569225 RRP1BQ14684 758 aaKnown RBP10.8□□□□□ -0.68
CHD9-219ENST00000569225 RAB3GAP1Q15042 981 aa10.8□□□□□ -0.68
CHD9-219ENST00000569225 PPP4R3BQ5MIZ7 849 aa10.8□□□□□ -0.68
CHD9-219ENST00000569225 CNNM2Q9H8M5 875 aa10.8□□□□□ -0.68
CHD9-219ENST00000569225 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.8□□□□□ -0.68
CHD9-219ENST00000569225 CDK5RAP2Q96SN8 1893 aa10.8□□□□□ -0.68
CHD9-219ENST00000569225 WDR33Q9C0J8 1336 aaKnown RBP10.8□□□□□ -0.68
CHD9-219ENST00000569225 MANSC4A6NHS7 340 aaPredicted RBP10.79□□□□□ -0.68
CHD9-219ENST00000569225 FAM155AB1AL88 458 aaPredicted RBP10.79□□□□□ -0.68
CHD9-219ENST00000569225 RANBP6O60518 1105 aaKnown RBP10.79□□□□□ -0.68
CHD9-219ENST00000569225 FGRP09769 529 aa10.79□□□□□ -0.68
CHD9-219ENST00000569225 TSPY3P0CV98 308 aa10.79□□□□□ -0.68
CHD9-219ENST00000569225 TSPY8P0CW00 308 aa10.79□□□□□ -0.68
CHD9-219ENST00000569225 AKR1B1P15121 316 aa10.79□□□□□ -0.68
CHD9-219ENST00000569225 MAP2K2P36507 400 aa10.79□□□□□ -0.68
CHD9-219ENST00000569225 GTF2A2P52657 109 aa10.79□□□□□ -0.68
CHD9-219ENST00000569225 TRDNQ13061 729 aa10.79□□□□□ -0.68
CHD9-219ENST00000569225 SNAPC2Q13487 334 aa10.79□□□□□ -0.68
CHD9-219ENST00000569225 ESR2Q92731 530 aa10.79□□□□□ -0.68
CHD9-219ENST00000569225 WDR18Q9BV38 432 aa10.79□□□□□ -0.68
CHD9-219ENST00000569225 KRT23Q9C075 422 aa10.79□□□□□ -0.68
CHD9-219ENST00000569225 MYH1P12882 1939 aa10.79□□□□□ -0.68
CHD9-219ENST00000569225 TSPY2A6NKD2 308 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 CXCL11O14625 94 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 ZKSCAN1P17029 563 aaPredicted RBP10.78□□□□□ -0.68
CHD9-219ENST00000569225 MCCP23508 829 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 INHBEP58166 350 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 SREBF2Q12772 1141 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 RRP12Q5JTH9 1297 aaKnown RBP10.78□□□□□ -0.68
CHD9-219ENST00000569225 TBC1D10CQ8IV04 446 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 ZNF280CQ8ND82 737 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 SH2D4AQ9H788 454 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 KANSL2Q9H9L4 492 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 IRF6O14896 467 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 CYP21A2P08686 494 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 CETPP11597 493 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 TFAP4Q01664 338 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 ICA1Q05084 483 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 MKRN3Q13064 507 aaKnown RBP10.78□□□□□ -0.68
CHD9-219ENST00000569225 SEPT2Q15019 361 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 CREB3L3Q68CJ9 461 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 RALYLQ86SE5 291 aaKnown RBP10.78□□□□□ -0.68
CHD9-219ENST00000569225 NEDD1Q8NHV4 660 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 CNKSR2Q8WXI2 1034 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 FEZ1Q99689 392 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 NBPF3Q9H094 633 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 ARHGEF10LQ9HCE6 1279 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 KCNH4Q9UQ05 1017 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 AFG3L2Q9Y4W6 797 aa10.78□□□□□ -0.68
CHD9-219ENST00000569225 TRIM75PA6NK02 468 aa10.77□□□□□ -0.69
CHD9-219ENST00000569225 SLC27A2O14975 620 aa10.77□□□□□ -0.69
CHD9-219ENST00000569225 GJA5P36382 358 aa10.77□□□□□ -0.69
CHD9-219ENST00000569225 JAG1P78504 1218 aa10.77□□□□□ -0.69
CHD9-219ENST00000569225 KIF23Q02241 960 aaPredicted RBP10.77□□□□□ -0.69
CHD9-219ENST00000569225 SPP2Q13103 211 aa10.77□□□□□ -0.69
CHD9-219ENST00000569225 NECTIN1Q15223 517 aa10.77□□□□□ -0.69
CHD9-219ENST00000569225 CCDC178Q5BJE1 867 aa10.77□□□□□ -0.69
CHD9-219ENST00000569225 SIPA1L1O43166 1804 aa10.77□□□□□ -0.69
CHD9-219ENST00000569225 PLIN4Q96Q06 1357 aa10.77□□□□□ -0.69
CHD9-219ENST00000569225 C19orf81C9J6K1 198 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 USP17L10C9JJH3 530 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 AOC2O75106 756 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 USP14P54578 494 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 KRT32Q14532 448 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms