RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 ZNF213O14771 459 aa12.4□□□□□ -0.42
CDH3-210ENST00000569117 HLA-DOAP06340 250 aa12.4□□□□□ -0.42
CDH3-210ENST00000569117 CYP2D6P10635 497 aa12.4□□□□□ -0.42
CDH3-210ENST00000569117 RASA3Q14644 834 aa12.4□□□□□ -0.42
CDH3-210ENST00000569117 EAPPQ56P03 285 aaPredicted RBP12.4□□□□□ -0.42
CDH3-210ENST00000569117 TTC6Q86TZ1 520 aa12.4□□□□□ -0.42
CDH3-210ENST00000569117 ZFPM1Q8IX07 1006 aa12.4□□□□□ -0.42
CDH3-210ENST00000569117 PLPP6Q8IY26 295 aa12.4□□□□□ -0.42
CDH3-210ENST00000569117 ZNF526Q8TF50 670 aaPredicted RBP12.4□□□□□ -0.42
CDH3-210ENST00000569117 DCPSQ96C86 337 aaKnown RBP12.4□□□□□ -0.42
CDH3-210ENST00000569117 IL17RAQ96F46 866 aa12.4□□□□□ -0.42
CDH3-210ENST00000569117 TEPSINQ96N21 525 aa12.4□□□□□ -0.42
CDH3-210ENST00000569117 TBC1D32Q96NH3 1257 aa12.4□□□□□ -0.42
CDH3-210ENST00000569117 NBPF3Q9H094 633 aa12.4□□□□□ -0.42
CDH3-210ENST00000569117 DEFB129Q9H1M3 183 aa12.4□□□□□ -0.42
CDH3-210ENST00000569117 CYP2D7A0A087X1C5 515 aa12.39□□□□□ -0.43
CDH3-210ENST00000569117 DDTLA6NHG4 134 aaPredicted RBP12.39□□□□□ -0.43
CDH3-210ENST00000569117 MINDY4BA8MYZ0 360 aa12.39□□□□□ -0.43
CDH3-210ENST00000569117 POLR3DP05423 398 aaPredicted RBP12.39□□□□□ -0.43
CDH3-210ENST00000569117 PCP11498 1178 aaKnown RBP12.39□□□□□ -0.43
CDH3-210ENST00000569117 ZKSCAN1P17029 563 aaPredicted RBP12.39□□□□□ -0.43
CDH3-210ENST00000569117 PLCD1P51178 756 aa12.39□□□□□ -0.43
CDH3-210ENST00000569117 ANAPC15P60006 121 aa12.39□□□□□ -0.43
CDH3-210ENST00000569117 HAND2P61296 217 aa12.39□□□□□ -0.43
CDH3-210ENST00000569117 EVX2Q03828 476 aa12.39□□□□□ -0.43
CDH3-210ENST00000569117 GABPAQ06546 454 aa12.39□□□□□ -0.43
CDH3-210ENST00000569117 TSGA10IPQ3SY00 556 aa12.39□□□□□ -0.43
CDH3-210ENST00000569117 METTL16Q86W50 562 aaKnown RBP12.39□□□□□ -0.43
CDH3-210ENST00000569117 LDHDQ86WU2 507 aa12.39□□□□□ -0.43
CDH3-210ENST00000569117 TBC1D10CQ8IV04 446 aa12.39□□□□□ -0.43
CDH3-210ENST00000569117 SULF1Q8IWU6 871 aa12.39□□□□□ -0.43
CDH3-210ENST00000569117 ZSCAN29Q8IWY8 852 aaPredicted RBP12.39□□□□□ -0.43
CDH3-210ENST00000569117 STAG1Q8WVM7 1258 aa12.39□□□□□ -0.43
CDH3-210ENST00000569117 CSRNP1Q96S65 589 aa12.39□□□□□ -0.43
CDH3-210ENST00000569117 C22orf23Q9BZE7 217 aa12.39□□□□□ -0.43
CDH3-210ENST00000569117 TMEM39BQ9GZU3 492 aa12.39□□□□□ -0.43
CDH3-210ENST00000569117 DOCK1Q14185 1865 aa12.38□□□□□ -0.43
CDH3-210ENST00000569117 SLC3A2P08195 630 aaKnown RBP12.38□□□□□ -0.43
CDH3-210ENST00000569117 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
CDH3-210ENST00000569117 POTEJP0CG39 1038 aa12.38□□□□□ -0.43
CDH3-210ENST00000569117 MAP3K9P80192 1104 aa12.38□□□□□ -0.43
CDH3-210ENST00000569117 KRT32Q14532 448 aa12.38□□□□□ -0.43
CDH3-210ENST00000569117 SLC4A8Q2Y0W8 1093 aa12.38□□□□□ -0.43
CDH3-210ENST00000569117 C16orf86Q6ZW13 317 aa12.38□□□□□ -0.43
CDH3-210ENST00000569117 KRT26Q7Z3Y9 468 aa12.38□□□□□ -0.43
CDH3-210ENST00000569117 CDAN1Q8IWY9 1227 aa12.38□□□□□ -0.43
CDH3-210ENST00000569117 RNF41Q9H4P4 317 aaPredicted RBP12.38□□□□□ -0.43
CDH3-210ENST00000569117 PI4KBQ9UBF8 816 aa12.38□□□□□ -0.43
CDH3-210ENST00000569117 SERPINB13Q9UIV8 391 aa12.38□□□□□ -0.43
CDH3-210ENST00000569117 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.38□□□□□ -0.43
CDH3-210ENST00000569117 SNX14Q9Y5W7 946 aa12.38□□□□□ -0.43
CDH3-210ENST00000569117 TAF6LQ9Y6J9 622 aa12.38□□□□□ -0.43
CDH3-210ENST00000569117 TRPM7Q96QT4 1865 aa12.38□□□□□ -0.43
CDH3-210ENST00000569117 NEDD4P46934 1319 aa12.37□□□□□ -0.43
CDH3-210ENST00000569117 ADM5C9JUS6 153 aa12.37□□□□□ -0.43
CDH3-210ENST00000569117 E7EWF7 191 aa12.37□□□□□ -0.43
CDH3-210ENST00000569117 SMIM22K7EJ46 135 aa12.37□□□□□ -0.43
CDH3-210ENST00000569117 ORC4O43929 436 aa12.37□□□□□ -0.43
CDH3-210ENST00000569117 FGRP09769 529 aa12.37□□□□□ -0.43
CDH3-210ENST00000569117 NT5C2P49902 561 aa12.37□□□□□ -0.43
CDH3-210ENST00000569117 CTDSPL2Q05D32 466 aa12.37□□□□□ -0.43
CDH3-210ENST00000569117 AKNAD1Q5T1N1 836 aa12.37□□□□□ -0.43
CDH3-210ENST00000569117 STOX1Q6ZVD7 989 aa12.37□□□□□ -0.43
CDH3-210ENST00000569117 HOOK2Q96ED9 719 aa12.37□□□□□ -0.43
CDH3-210ENST00000569117 DNAJC18Q9H819 358 aa12.37□□□□□ -0.43
CDH3-210ENST00000569117 SWAP70Q9UH65 585 aa12.37□□□□□ -0.43
CDH3-210ENST00000569117 HERC5Q9UII4 1024 aaKnown RBP12.37□□□□□ -0.43
CDH3-210ENST00000569117 SCAF8Q9UPN6 1271 aaKnown RBP12.37□□□□□ -0.43
CDH3-210ENST00000569117 PLIN4Q96Q06 1357 aa12.36□□□□□ -0.43
CDH3-210ENST00000569117 OSBPP22059 807 aa12.36□□□□□ -0.43
CDH3-210ENST00000569117 MAP3K10Q02779 954 aa12.36□□□□□ -0.43
CDH3-210ENST00000569117 PDE4BQ07343 736 aa12.36□□□□□ -0.43
CDH3-210ENST00000569117 CDC37L1Q7L3B6 337 aa12.36□□□□□ -0.43
CDH3-210ENST00000569117 FOXP4Q8IVH2 680 aaPredicted RBP12.36□□□□□ -0.43
CDH3-210ENST00000569117 CNNM2Q9H8M5 875 aa12.36□□□□□ -0.43
CDH3-210ENST00000569117 ZNF287Q9HBT7 754 aa12.36□□□□□ -0.43
CDH3-210ENST00000569117 TACC3Q9Y6A5 838 aa12.36□□□□□ -0.43
CDH3-210ENST00000569117 KIF3CO14782 793 aa12.35□□□□□ -0.43
CDH3-210ENST00000569117 TBC1D12O60347 775 aa12.35□□□□□ -0.43
CDH3-210ENST00000569117 SHMT1P34896 483 aa12.35□□□□□ -0.43
CDH3-210ENST00000569117 HIC1Q14526 733 aa12.35□□□□□ -0.43
CDH3-210ENST00000569117 NBPF12Q5TAG4 269 aaPredicted RBP12.35□□□□□ -0.43
CDH3-210ENST00000569117 MFSD6Q6ZSS7 791 aa12.35□□□□□ -0.43
CDH3-210ENST00000569117 CRACR2BQ8N4Y2 399 aaPredicted RBP12.35□□□□□ -0.43
CDH3-210ENST00000569117 SLC44A5Q8NCS7 719 aa12.35□□□□□ -0.43
CDH3-210ENST00000569117 CDCA5Q96FF9 252 aa12.35□□□□□ -0.43
CDH3-210ENST00000569117 DYNLL2Q96FJ2 89 aa12.35□□□□□ -0.43
CDH3-210ENST00000569117 KIF2CQ99661 725 aa12.35□□□□□ -0.43
CDH3-210ENST00000569117 TRIM34Q9BYJ4 488 aa12.35□□□□□ -0.43
CDH3-210ENST00000569117 GLIS2Q9BZE0 524 aaPredicted RBP12.35□□□□□ -0.43
CDH3-210ENST00000569117 TM6SF1Q9BZW5 370 aa12.35□□□□□ -0.43
CDH3-210ENST00000569117 GOPCQ9HD26 462 aa12.35□□□□□ -0.43
CDH3-210ENST00000569117 RASA1P20936 1047 aa12.34□□□□□ -0.43
CDH3-210ENST00000569117 FECHP22830 423 aa12.34□□□□□ -0.43
CDH3-210ENST00000569117 YY1P25490 414 aa12.34□□□□□ -0.43
CDH3-210ENST00000569117 CDK8P49336 464 aa12.34□□□□□ -0.43
CDH3-210ENST00000569117 TRDNQ13061 729 aa12.34□□□□□ -0.43
CDH3-210ENST00000569117 ADCK5Q3MIX3 580 aa12.34□□□□□ -0.43
CDH3-210ENST00000569117 SUPT20HL1Q3ZLR7 823 aa12.34□□□□□ -0.43
CDH3-210ENST00000569117 DCAF15Q66K64 600 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms