RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 ZNF428Q96B54 188 aa5.61□□□□□ -1.51
HMGB1P6-201ENST00000569046 HEXIM2Q96MH2 286 aaKnown RBP5.61□□□□□ -1.51
HMGB1P6-201ENST00000569046 DPH2Q9BQC3 489 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P6-201ENST00000569046 CNTNAP4Q9C0A0 1308 aa5.61□□□□□ -1.51
HMGB1P6-201ENST00000569046 BCL11AQ9H165 835 aa5.61□□□□□ -1.51
HMGB1P6-201ENST00000569046 TJP2Q9UDY2 1190 aa5.61□□□□□ -1.51
HMGB1P6-201ENST00000569046 POLR3KQ9Y2Y1 108 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P6-201ENST00000569046 CCDC9Q9Y3X0 531 aaKnown RBP5.61□□□□□ -1.51
HMGB1P6-201ENST00000569046 TACC3Q9Y6A5 838 aa5.61□□□□□ -1.51
HMGB1P6-201ENST00000569046 NCAPD3P42695 1498 aa5.6□□□□□ -1.51
HMGB1P6-201ENST00000569046 TLR3O15455 904 aaKnown RBP5.6□□□□□ -1.51
HMGB1P6-201ENST00000569046 GRIN3BO60391 1043 aa5.6□□□□□ -1.51
HMGB1P6-201ENST00000569046 EOMESO95936 686 aa5.6□□□□□ -1.51
HMGB1P6-201ENST00000569046 ZNF394Q53GI3 561 aa5.6□□□□□ -1.51
HMGB1P6-201ENST00000569046 PRAMEF13Q5VWM6 474 aa5.6□□□□□ -1.51
HMGB1P6-201ENST00000569046 NFXL1Q6ZNB6 911 aa5.6□□□□□ -1.51
HMGB1P6-201ENST00000569046 HID1Q8IV36 788 aa5.6□□□□□ -1.51
HMGB1P6-201ENST00000569046 ZNF296Q8WUU4 475 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P6-201ENST00000569046 ACSF2Q96CM8 615 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P6-201ENST00000569046 FOXQ1Q9C009 403 aa5.6□□□□□ -1.51
HMGB1P6-201ENST00000569046 ATAD2BQ9ULI0 1458 aa5.59□□□□□ -1.51
HMGB1P6-201ENST00000569046 BPNT1O95861 308 aa5.59□□□□□ -1.51
HMGB1P6-201ENST00000569046 CST3P01034 146 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P6-201ENST00000569046 MPP2Q14168 576 aa5.59□□□□□ -1.51
HMGB1P6-201ENST00000569046 REC114Q7Z4M0 266 aa5.59□□□□□ -1.51
HMGB1P6-201ENST00000569046 MCATQ8IVS2 390 aaKnown RBP5.59□□□□□ -1.51
HMGB1P6-201ENST00000569046 MRPL41Q8IXM3 137 aaKnown RBP5.59□□□□□ -1.51
HMGB1P6-201ENST00000569046 XAGE3Q8WTP9 111 aa5.59□□□□□ -1.51
HMGB1P6-201ENST00000569046 TMEM87BQ96K49 555 aa5.59□□□□□ -1.51
HMGB1P6-201ENST00000569046 METTL5Q9NRN9 209 aaKnown RBP5.59□□□□□ -1.51
HMGB1P6-201ENST00000569046 PCDHGB7Q9Y5F8 929 aa5.59□□□□□ -1.51
HMGB1P6-201ENST00000569046 SMARCA4P51532 1647 aa5.59□□□□□ -1.52
HMGB1P6-201ENST00000569046 PRR36Q9H6K5 1346 aa5.58□□□□□ -1.52
HMGB1P6-201ENST00000569046 UPK3BL1B0FP48 263 aa5.58□□□□□ -1.52
HMGB1P6-201ENST00000569046 UPK3BL2E5RIL1 263 aa5.58□□□□□ -1.52
HMGB1P6-201ENST00000569046 DNAJA2O60884 412 aa5.58□□□□□ -1.52
HMGB1P6-201ENST00000569046 PLCG1P19174 1290 aa5.58□□□□□ -1.52
HMGB1P6-201ENST00000569046 OXCT1P55809 520 aa5.58□□□□□ -1.52
HMGB1P6-201ENST00000569046 RACK1P63244 317 aaKnown RBP5.58□□□□□ -1.52
HMGB1P6-201ENST00000569046 METTL16Q86W50 562 aaKnown RBP5.58□□□□□ -1.52
HMGB1P6-201ENST00000569046 PLD6Q8N2A8 252 aaKnown RBP5.58□□□□□ -1.52
HMGB1P6-201ENST00000569046 MIPEPQ99797 713 aa5.58□□□□□ -1.52
HMGB1P6-201ENST00000569046 BRMS1Q9HCU9 246 aa5.58□□□□□ -1.52
HMGB1P6-201ENST00000569046 UBP1Q9NZI7 540 aa5.58□□□□□ -1.52
HMGB1P6-201ENST00000569046 PLAGL2Q9UPG8 496 aa5.58□□□□□ -1.52
HMGB1P6-201ENST00000569046 SUPT16HQ9Y5B9 1047 aaKnown RBP5.58□□□□□ -1.52
HMGB1P6-201ENST00000569046 SCAMP3O14828 347 aaKnown RBP5.57□□□□□ -1.52
HMGB1P6-201ENST00000569046 PDE4BQ07343 736 aa5.57□□□□□ -1.52
HMGB1P6-201ENST00000569046 TMEM201Q5SNT2 666 aa5.57□□□□□ -1.52
HMGB1P6-201ENST00000569046 SLC6A19Q695T7 634 aa5.57□□□□□ -1.52
HMGB1P6-201ENST00000569046 LETMD1Q6P1Q0 360 aa5.57□□□□□ -1.52
HMGB1P6-201ENST00000569046 USP48Q86UV5 1035 aa5.57□□□□□ -1.52
HMGB1P6-201ENST00000569046 WFDC3Q8IUB2 231 aa5.57□□□□□ -1.52
HMGB1P6-201ENST00000569046 MFSD2AQ8NA29 543 aa5.57□□□□□ -1.52
HMGB1P6-201ENST00000569046 RNF34Q969K3 372 aa5.57□□□□□ -1.52
HMGB1P6-201ENST00000569046 EAF1Q96JC9 268 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P6-201ENST00000569046 LRRC3Q9BY71 257 aa5.57□□□□□ -1.52
HMGB1P6-201ENST00000569046 REV1Q9UBZ9 1251 aa5.57□□□□□ -1.52
HMGB1P6-201ENST00000569046 CCDC39Q9UFE4 941 aa5.57□□□□□ -1.52
HMGB1P6-201ENST00000569046 ADAM30Q9UKF2 790 aa5.57□□□□□ -1.52
HMGB1P6-201ENST00000569046 PRR33A8MZF0 331 aa5.56□□□□□ -1.52
HMGB1P6-201ENST00000569046 CHURC1-FNTBB4DL54 471 aa5.56□□□□□ -1.52
HMGB1P6-201ENST00000569046 HTR3BO95264 441 aa5.56□□□□□ -1.52
HMGB1P6-201ENST00000569046 PRNPP04156 253 aa5.56□□□□□ -1.52
HMGB1P6-201ENST00000569046 HDLBPQ00341 1268 aaKnown RBP5.56□□□□□ -1.52
HMGB1P6-201ENST00000569046 C9orf131Q5VYM1 1079 aa5.56□□□□□ -1.52
HMGB1P6-201ENST00000569046 NPM2Q86SE8 214 aaKnown RBP5.56□□□□□ -1.52
HMGB1P6-201ENST00000569046 CDH24Q86UP0 819 aa5.56□□□□□ -1.52
HMGB1P6-201ENST00000569046 BSDC1Q9NW68 430 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P6-201ENST00000569046 DDX41Q9UJV9 622 aaKnown RBP5.56□□□□□ -1.52
HMGB1P6-201ENST00000569046 ROBO2Q9HCK4 1378 aa5.55□□□□□ -1.52
HMGB1P6-201ENST00000569046 IGF2BP3O00425 579 aaKnown RBP eCLIP5.55□□□□□ -1.52
HMGB1P6-201ENST00000569046 CEACAM5P06731 702 aa5.55□□□□□ -1.52
HMGB1P6-201ENST00000569046 ITIH2P19823 946 aa5.55□□□□□ -1.52
HMGB1P6-201ENST00000569046 NKPD1Q17RQ9 610 aa5.55□□□□□ -1.52
HMGB1P6-201ENST00000569046 CWF19L2Q2TBE0 894 aaKnown RBP5.55□□□□□ -1.52
HMGB1P6-201ENST00000569046 SEZ6Q53EL9 994 aa5.55□□□□□ -1.52
HMGB1P6-201ENST00000569046 NBPF11Q86T75 865 aa5.55□□□□□ -1.52
HMGB1P6-201ENST00000569046 KIAA0825Q8IV33 1275 aa5.55□□□□□ -1.52
HMGB1P6-201ENST00000569046 DNAJB8Q8NHS0 232 aa5.55□□□□□ -1.52
HMGB1P6-201ENST00000569046 NETO1Q8TDF5 533 aa5.55□□□□□ -1.52
HMGB1P6-201ENST00000569046 PPP1R13LQ8WUF5 828 aa5.55□□□□□ -1.52
HMGB1P6-201ENST00000569046 SPON2Q9BUD6 331 aa5.55□□□□□ -1.52
HMGB1P6-201ENST00000569046 NT5C1AQ9BXI3 368 aa5.55□□□□□ -1.52
HMGB1P6-201ENST00000569046 MKNK2Q9HBH9 465 aa5.55□□□□□ -1.52
HMGB1P6-201ENST00000569046 PRDM5Q9NQX1 630 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P6-201ENST00000569046 PCDHB14Q9Y5E9 798 aa5.55□□□□□ -1.52
HMGB1P6-201ENST00000569046 BAZ1AQ9NRL2 1556 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P6-201ENST00000569046 HMGXB3Q12766 1538 aa5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 BAZ1BQ9UIG0 1483 aaKnown RBP5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 WNT11O96014 354 aa5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 CD96P40200 585 aa5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 GP2P55259 537 aaKnown RBP5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 CLCQ05315 142 aa5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 APOBRQ0VD83 1088 aa5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 BNIP3Q12983 259 aa5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 ZNF574Q6ZN55 896 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 SPRED2Q7Z698 418 aa5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 SLITRK4Q8IW52 837 aa5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 SPACA3Q8IXA5 215 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms