RNA–Protein interactions for RNA: ENST00000568881.1

NEIL1-220, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-220ENST00000568881 MCM9Q9NXL9 1143 aa16.52■□□□□ 0.24
NEIL1-220ENST00000568881 PNMA3Q9UL41 463 aa16.52■□□□□ 0.24
NEIL1-220ENST00000568881 SLC45A1Q9Y2W3 748 aa16.52■□□□□ 0.24
NEIL1-220ENST00000568881 CDK5RAP2Q96SN8 1893 aa16.52■□□□□ 0.23
NEIL1-220ENST00000568881 MYH1P12882 1939 aa16.51■□□□□ 0.23
NEIL1-220ENST00000568881 MBD4O95243 580 aa16.51■□□□□ 0.23
NEIL1-220ENST00000568881 PROCA1Q8NCQ7 364 aaPredicted RBP16.51■□□□□ 0.23
NEIL1-220ENST00000568881 FSD1Q9BTV5 496 aa16.51■□□□□ 0.23
NEIL1-220ENST00000568881 CABP5Q9NP86 173 aa16.51■□□□□ 0.23
NEIL1-220ENST00000568881 RRP1BQ14684 758 aaKnown RBP16.5■□□□□ 0.23
NEIL1-220ENST00000568881 FBXO46Q6PJ61 603 aaPredicted RBP16.5■□□□□ 0.23
NEIL1-220ENST00000568881 TICAM2Q86XR7 235 aa16.5■□□□□ 0.23
NEIL1-220ENST00000568881 LCORLQ8N3X6 602 aa16.5■□□□□ 0.23
NEIL1-220ENST00000568881 RILPL2Q969X0 211 aa16.5■□□□□ 0.23
NEIL1-220ENST00000568881 ARMT1Q9H993 441 aa16.5■□□□□ 0.23
NEIL1-220ENST00000568881 EFCC1Q9HA90 598 aa16.5■□□□□ 0.23
NEIL1-220ENST00000568881 TRIM17Q9Y577 477 aa16.5■□□□□ 0.23
NEIL1-220ENST00000568881 SPP2Q13103 211 aa16.49■□□□□ 0.23
NEIL1-220ENST00000568881 SLC4A8Q2Y0W8 1093 aa16.49■□□□□ 0.23
NEIL1-220ENST00000568881 CERKLQ49MI3 558 aaPredicted RBP16.49■□□□□ 0.23
NEIL1-220ENST00000568881 TTC22Q5TAA0 569 aa16.49■□□□□ 0.23
NEIL1-220ENST00000568881 CD99L2Q8TCZ2 262 aa16.49■□□□□ 0.23
NEIL1-220ENST00000568881 APPBP2Q92624 585 aa16.49■□□□□ 0.23
NEIL1-220ENST00000568881 WDR18Q9BV38 432 aa16.49■□□□□ 0.23
NEIL1-220ENST00000568881 DCP1AQ9NPI6 582 aaPredicted RBP16.49■□□□□ 0.23
NEIL1-220ENST00000568881 TMOD4Q9NZQ9 345 aa16.49■□□□□ 0.23
NEIL1-220ENST00000568881 SWAP70Q9UH65 585 aa16.49■□□□□ 0.23
NEIL1-220ENST00000568881 AGTPBP1Q9UPW5 1226 aa16.49■□□□□ 0.23
NEIL1-220ENST00000568881 HTTP42858 3142 aa16.48■□□□□ 0.23
NEIL1-220ENST00000568881 SIPA1L1O43166 1804 aa16.48■□□□□ 0.23
NEIL1-220ENST00000568881 ATAD5Q96QE3 1844 aa16.48■□□□□ 0.23
NEIL1-220ENST00000568881 C19orf81C9J6K1 198 aa16.48■□□□□ 0.23
NEIL1-220ENST00000568881 RNF113AO15541 343 aaKnown RBP16.48■□□□□ 0.23
NEIL1-220ENST00000568881 GNRH1P01148 92 aa16.48■□□□□ 0.23
NEIL1-220ENST00000568881 CHGBP05060 677 aa16.48■□□□□ 0.23
NEIL1-220ENST00000568881 GNAT2P19087 354 aa16.48■□□□□ 0.23
NEIL1-220ENST00000568881 SHROOM1Q2M3G4 852 aaPredicted RBP16.48■□□□□ 0.23
NEIL1-220ENST00000568881 SLFNL1Q499Z3 407 aa16.48■□□□□ 0.23
NEIL1-220ENST00000568881 TATDN1Q6P1N9 297 aa16.48■□□□□ 0.23
NEIL1-220ENST00000568881 SMCR8Q8TEV9 937 aaPredicted RBP16.48■□□□□ 0.23
NEIL1-220ENST00000568881 SDR42E1Q8WUS8 393 aa16.48■□□□□ 0.23
NEIL1-220ENST00000568881 ZBTB21Q9ULJ3 1066 aa16.48■□□□□ 0.23
NEIL1-220ENST00000568881 SLC4A4Q9Y6R1 1079 aa16.48■□□□□ 0.23
NEIL1-220ENST00000568881 NAV1Q8NEY1 1877 aa16.48■□□□□ 0.23
NEIL1-220ENST00000568881 USP17L10C9JJH3 530 aa16.47■□□□□ 0.23
NEIL1-220ENST00000568881 GDF11O95390 407 aa16.47■□□□□ 0.23
NEIL1-220ENST00000568881 OSBPP22059 807 aa16.47■□□□□ 0.23
NEIL1-220ENST00000568881 MOGSQ13724 837 aa16.47■□□□□ 0.23
NEIL1-220ENST00000568881 ABCB5Q2M3G0 1257 aa16.47■□□□□ 0.23
NEIL1-220ENST00000568881 OTOP1Q7RTM1 612 aa16.47■□□□□ 0.23
NEIL1-220ENST00000568881 DNAJC18Q9H819 358 aa16.47■□□□□ 0.23
NEIL1-220ENST00000568881 GTF3C3Q9Y5Q9 886 aa16.47■□□□□ 0.23
NEIL1-220ENST00000568881 HOXD10P28358 340 aa16.46■□□□□ 0.23
NEIL1-220ENST00000568881 PLCD1P51178 756 aa16.46■□□□□ 0.23
NEIL1-220ENST00000568881 HMGCS2P54868 508 aa16.46■□□□□ 0.23
NEIL1-220ENST00000568881 PRMT2P55345 433 aa16.46■□□□□ 0.23
NEIL1-220ENST00000568881 BACE1P56817 501 aa16.46■□□□□ 0.23
NEIL1-220ENST00000568881 SH3D19Q5HYK7 790 aa16.46■□□□□ 0.23
NEIL1-220ENST00000568881 GPAT2Q6NUI2 795 aa16.46■□□□□ 0.23
NEIL1-220ENST00000568881 GIMAP6Q6P9H5 292 aa16.46■□□□□ 0.23
NEIL1-220ENST00000568881 C17orf99Q6UX52 265 aa16.46■□□□□ 0.23
NEIL1-220ENST00000568881 SKAP1Q86WV1 359 aa16.46■□□□□ 0.23
NEIL1-220ENST00000568881 FEZ1Q99689 392 aa16.46■□□□□ 0.23
NEIL1-220ENST00000568881 ARPP21Q9UBL0 812 aaPredicted RBP16.46■□□□□ 0.23
NEIL1-220ENST00000568881 HPS5Q9UPZ3 1129 aa16.46■□□□□ 0.23
NEIL1-220ENST00000568881 ZSWIM8A7E2V4 1837 aa16.46■□□□□ 0.23
NEIL1-220ENST00000568881 HIP1O00291 1037 aa16.45■□□□□ 0.22
NEIL1-220ENST00000568881 ECM2O94769 699 aaPredicted RBP16.45■□□□□ 0.22
NEIL1-220ENST00000568881 GH2P01242 217 aa16.45■□□□□ 0.22
NEIL1-220ENST00000568881 GSPT1P15170 499 aaKnown RBP16.45■□□□□ 0.22
NEIL1-220ENST00000568881 SDSP20132 328 aa16.45■□□□□ 0.22
NEIL1-220ENST00000568881 USP14P54578 494 aa16.45■□□□□ 0.22
NEIL1-220ENST00000568881 JAG1P78504 1218 aa16.45■□□□□ 0.22
NEIL1-220ENST00000568881 LACTBP83111 547 aaPredicted RBP16.45■□□□□ 0.22
NEIL1-220ENST00000568881 EVX2Q03828 476 aa16.45■□□□□ 0.22
NEIL1-220ENST00000568881 MTMR2Q13614 643 aa16.45■□□□□ 0.22
NEIL1-220ENST00000568881 RAB3GAP1Q15042 981 aa16.45■□□□□ 0.22
NEIL1-220ENST00000568881 PUS7LQ9H0K6 701 aaKnown RBP16.45■□□□□ 0.22
NEIL1-220ENST00000568881 CPA4Q9UI42 421 aa16.45■□□□□ 0.22
NEIL1-220ENST00000568881 PHIPQ8WWQ0 1821 aa16.45■□□□□ 0.22
NEIL1-220ENST00000568881 MPHOSPH10O00566 681 aaKnown RBP16.44■□□□□ 0.22
NEIL1-220ENST00000568881 GCLCP48506 637 aaPredicted RBP16.44■□□□□ 0.22
NEIL1-220ENST00000568881 IRX3P78415 501 aaPredicted RBP16.44■□□□□ 0.22
NEIL1-220ENST00000568881 CCDC17Q96LX7 622 aa16.44■□□□□ 0.22
NEIL1-220ENST00000568881 NACAP1Q9BZK3 213 aa16.44■□□□□ 0.22
NEIL1-220ENST00000568881 ZNF287Q9HBT7 754 aa16.44■□□□□ 0.22
NEIL1-220ENST00000568881 DDX60LQ5H9U9 1706 aaKnown RBP16.44■□□□□ 0.22
NEIL1-220ENST00000568881 PTPRFP10586 1907 aa16.43■□□□□ 0.22
NEIL1-220ENST00000568881 PRKAB2O43741 272 aa16.43■□□□□ 0.22
NEIL1-220ENST00000568881 APPP05067 770 aa16.43■□□□□ 0.22
NEIL1-220ENST00000568881 CYP2C8P10632 490 aa16.43■□□□□ 0.22
NEIL1-220ENST00000568881 SHMT1P34896 483 aa16.43■□□□□ 0.22
NEIL1-220ENST00000568881 GABPAQ06546 454 aa16.43■□□□□ 0.22
NEIL1-220ENST00000568881 BMP2KLQ5H9B9 411 aa16.43■□□□□ 0.22
NEIL1-220ENST00000568881 USP17L2Q6R6M4 530 aa16.43■□□□□ 0.22
NEIL1-220ENST00000568881 NBPF11Q86T75 865 aa16.43■□□□□ 0.22
NEIL1-220ENST00000568881 GTF3C2Q8WUA4 911 aaPredicted RBP16.43■□□□□ 0.22
NEIL1-220ENST00000568881 STRBPQ96SI9 672 aaKnown RBP16.43■□□□□ 0.22
NEIL1-220ENST00000568881 DIAPH3Q9NSV4 1193 aa16.43■□□□□ 0.22
NEIL1-220ENST00000568881 PTPN22Q9Y2R2 807 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms