RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 GPHNQ9NQX3 736 aaPredicted RBP5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 RAI14Q9P0K7 980 aa5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 LRP2BPQ9P2M1 347 aa5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 GNEQ9Y223 722 aaKnown RBP5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 SNCAIPQ9Y6H5 919 aa5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 PDS5AQ29RF7 1337 aaKnown RBP5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 PDHXO00330 501 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 CTNND1O60716 968 aaKnown RBP5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 SURF6O75683 361 aaKnown RBP5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 FMNL1O95466 1100 aaPredicted RBP5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 BAG3O95817 575 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 INPP5BP32019 993 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 BTDP43251 543 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 RGS3P49796 1198 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 LACTBP83111 547 aaPredicted RBP5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 ATP8B2P98198 1209 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 MECOMQ03112 1051 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 NFIAQ12857 509 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 PICALMQ13492 652 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 MTX1Q13505 466 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 RASGRF1Q13972 1273 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 TTC39AQ5SRH9 613 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 ANKRD23Q86SG2 305 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 ITPRIPQ8IWB1 547 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 SPATA5Q8NB90 893 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 PROCA1Q8NCQ7 364 aaPredicted RBP5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 RAET1EQ8TD07 263 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 GCC1Q96CN9 775 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 PARK7Q99497 189 aaKnown RBP5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 TRIM34Q9BYJ4 488 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 KRTAP3-3Q9BYR6 98 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 KRTAP3-2Q9BYR7 98 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 FAM198AQ9UFP1 575 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 ZNF112Q9UJU3 913 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 ZHX2Q9Y6X8 837 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 DOCK2Q92608 1830 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 MROH7-TTC4A0A0A0MT08 1334 aa5.71□□□□□ -1.5
HERPUD1-213ENST00000568358 GPR75-ASB3A0A0A6YYF3 556 aa5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 POTEB3A0JP26 581 aa5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 OSBPP22059 807 aa5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 PSMC4P43686 418 aa5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 NOL9Q5SY16 702 aaKnown RBP5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 PRPF38BQ5VTL8 546 aaKnown RBP5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 NAA16Q6N069 864 aaPredicted RBP5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 POTEBQ6S5H4 581 aa5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 TMEM92Q6UXU6 159 aa5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 GADL1Q6ZQY3 521 aa5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 SCYL3Q8IZE3 742 aa5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 TMEM57Q8N5G2 664 aa5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 SMCR8Q8TEV9 937 aaPredicted RBP5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 ARMC5Q96C12 935 aa5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 TBC1D2Q9BYX2 928 aa5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 CHMP4BQ9H444 224 aaKnown RBP5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 GPR108Q9NPR9 543 aa5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 SNRKQ9NRH2 765 aa5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 HMG20BQ9P0W2 317 aa5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 KIAA1522Q9P206 1035 aaPredicted RBP5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 BIN2Q9UBW5 565 aaPredicted RBP5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 CPA4Q9UI42 421 aa5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 KCNH4Q9UQ05 1017 aa5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 MGAMO43451 1857 aa5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 GAKO14976 1311 aa5.7□□□□□ -1.5
HERPUD1-213ENST00000568358 DOCK3Q8IZD9 2030 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 PNMA6EA0A0J9YXQ4 647 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 TRIM75PA6NK02 468 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 PHF20L1A8MW92 1017 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 PTPRAP18433 802 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 ARID4AP29374 1257 aaPredicted RBP5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 FCGRTP55899 365 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 UBXN2AP68543 259 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 PABPC4Q13310 644 aaKnown RBP eCLIP5.69□□□□□ -1.56e-14■■■□□ 18
HERPUD1-213ENST00000568358 HSP90AB4PQ58FF6 505 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 PPP2R2DQ66LE6 453 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 C17orf99Q6UX52 265 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 TBC1D9Q6ZT07 1266 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 ERC1Q8IUD2 1116 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 ZFPM1Q8IX07 1006 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 TEX11Q8IYF3 940 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 NKX2-3Q8TAU0 364 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 SSH3Q8TE77 659 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 NSUN4Q96CB9 384 aaKnown RBP5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 TRIM47Q96LD4 638 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 OSBPL5Q9H0X9 879 aaPredicted RBP5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 DHX36Q9H2U1 1008 aaKnown RBP5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 AS3MTQ9HBK9 375 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 PI4KBQ9UBF8 816 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 PNMA3Q9UL41 463 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 SLC45A1Q9Y2W3 748 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 PTCH2Q9Y6C5 1203 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 IVNS1ABPQ9Y6Y0 642 aa5.69□□□□□ -1.5
HERPUD1-213ENST00000568358 A0A0G2JLL6 359 aaPredicted RBP5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 DDTLA6NHG4 134 aaPredicted RBP5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 USP17L5A8MUK1 530 aa5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 ZBTB7BO15156 539 aaPredicted RBP5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 MYCP01106 439 aaPredicted RBP5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 HLA-DOAP06340 250 aa5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 EN2P19622 333 aaPredicted RBP5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 GRK4P32298 578 aa5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 MCAMP43121 646 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms