RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 PABPC4Q13310 644 aaKnown RBP eCLIP15.63■□□□□ 0.09
TSC2-220ENST00000568238 SLC4A8Q2Y0W8 1093 aa15.63■□□□□ 0.09
TSC2-220ENST00000568238 FOXP4Q8IVH2 680 aaPredicted RBP15.63■□□□□ 0.09
TSC2-220ENST00000568238 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.63■□□□□ 0.09
TSC2-220ENST00000568238 BCL11AQ9H165 835 aa15.63■□□□□ 0.09
TSC2-220ENST00000568238 DOCK3Q8IZD9 2030 aa15.63■□□□□ 0.09
TSC2-220ENST00000568238 MYH8P13535 1937 aa15.62■□□□□ 0.09
TSC2-220ENST00000568238 GOLIM4O00461 696 aa15.62■□□□□ 0.09
TSC2-220ENST00000568238 GDF11O95390 407 aa15.62■□□□□ 0.09
TSC2-220ENST00000568238 PRKCZQ05513 592 aa15.62■□□□□ 0.09
TSC2-220ENST00000568238 MTMR2Q13614 643 aa15.62■□□□□ 0.09
TSC2-220ENST00000568238 DNAJC2Q99543 621 aaKnown RBP15.62■□□□□ 0.09
TSC2-220ENST00000568238 WDR18Q9BV38 432 aa15.62■□□□□ 0.09
TSC2-220ENST00000568238 GINM1Q9NU53 330 aa15.62■□□□□ 0.09
TSC2-220ENST00000568238 ZBTB21Q9ULJ3 1066 aa15.62■□□□□ 0.09
TSC2-220ENST00000568238 PDE6AP16499 860 aa15.61■□□□□ 0.09
TSC2-220ENST00000568238 SH3D19Q5HYK7 790 aa15.61■□□□□ 0.09
TSC2-220ENST00000568238 SLC9C2Q5TAH2 1124 aa15.61■□□□□ 0.09
TSC2-220ENST00000568238 ANKRD13CQ8N6S4 541 aa15.61■□□□□ 0.09
TSC2-220ENST00000568238 RIOK1Q9BRS2 568 aaKnown RBP15.61■□□□□ 0.09
TSC2-220ENST00000568238 MAGEB6P1A0A0J9YX57 407 aa15.6■□□□□ 0.09
TSC2-220ENST00000568238 TNPO2O14787 897 aaKnown RBP15.6■□□□□ 0.09
TSC2-220ENST00000568238 GRK4P32298 578 aa15.6■□□□□ 0.09
TSC2-220ENST00000568238 BACE1P56817 501 aa15.6■□□□□ 0.09
TSC2-220ENST00000568238 JAG1P78504 1218 aa15.6■□□□□ 0.09
TSC2-220ENST00000568238 FAM110CQ1W6H9 321 aa15.6■□□□□ 0.09
TSC2-220ENST00000568238 SHROOM1Q2M3G4 852 aaPredicted RBP15.6■□□□□ 0.09
TSC2-220ENST00000568238 EHD4Q9H223 541 aa15.6■□□□□ 0.09
TSC2-220ENST00000568238 TMOD4Q9NZQ9 345 aa15.6■□□□□ 0.09
TSC2-220ENST00000568238 SERPINB13Q9UIV8 391 aa15.6■□□□□ 0.09
TSC2-220ENST00000568238 CEP290O15078 2479 aa15.6■□□□□ 0.09
TSC2-220ENST00000568238 BAZ2AQ9UIF9 1905 aaKnown RBP15.59■□□□□ 0.09
TSC2-220ENST00000568238 GCLCP48506 637 aaPredicted RBP15.59■□□□□ 0.09
TSC2-220ENST00000568238 TTC6Q86TZ1 520 aa15.59■□□□□ 0.09
TSC2-220ENST00000568238 SLAIN1Q8ND83 568 aa15.59■□□□□ 0.09
TSC2-220ENST00000568238 CRNKL1Q9BZJ0 848 aaKnown RBP15.59■□□□□ 0.09
TSC2-220ENST00000568238 ASCC2Q9H1I8 757 aaPredicted RBP15.59■□□□□ 0.09
TSC2-220ENST00000568238 ZNF532Q9HCE3 1301 aa15.59■□□□□ 0.09
TSC2-220ENST00000568238 GH2P01242 217 aa15.58■□□□□ 0.08
TSC2-220ENST00000568238 IRX3P78415 501 aaPredicted RBP15.58■□□□□ 0.08
TSC2-220ENST00000568238 HDAC1Q13547 482 aaPredicted RBP15.58■□□□□ 0.08
TSC2-220ENST00000568238 TATDN1Q6P1N9 297 aa15.58■□□□□ 0.08
TSC2-220ENST00000568238 EDC3Q96F86 508 aaKnown RBP15.58■□□□□ 0.08
TSC2-220ENST00000568238 LRRCC1Q9C099 1032 aa15.58■□□□□ 0.08
TSC2-220ENST00000568238 DCTPP1Q9H773 170 aa15.58■□□□□ 0.08
TSC2-220ENST00000568238 PAG1Q9NWQ8 432 aa15.58■□□□□ 0.08
TSC2-220ENST00000568238 BIN2Q9UBW5 565 aaPredicted RBP15.58■□□□□ 0.08
TSC2-220ENST00000568238 GABRQQ9UN88 632 aa15.58■□□□□ 0.08
TSC2-220ENST00000568238 TCRBV5S4A2TA0A5A2 114 aa15.57■□□□□ 0.08
TSC2-220ENST00000568238 C19orf81C9J6K1 198 aa15.57■□□□□ 0.08
TSC2-220ENST00000568238 USP17L10C9JJH3 530 aa15.57■□□□□ 0.08
TSC2-220ENST00000568238 ATP5JP18859 108 aa15.57■□□□□ 0.08
TSC2-220ENST00000568238 FLT3LGP49771 235 aa15.57■□□□□ 0.08
TSC2-220ENST00000568238 UBXN2AP68543 259 aa15.57■□□□□ 0.08
TSC2-220ENST00000568238 MTFR1Q15390 333 aa15.57■□□□□ 0.08
TSC2-220ENST00000568238 COA7Q96BR5 231 aa15.57■□□□□ 0.08
TSC2-220ENST00000568238 HAUS7Q99871 368 aa15.57■□□□□ 0.08
TSC2-220ENST00000568238 BOLA2Q9H3K6 86 aa15.57■□□□□ 0.08
TSC2-220ENST00000568238 POLR3DP05423 398 aaPredicted RBP15.56■□□□□ 0.08
TSC2-220ENST00000568238 HOXA7P31268 230 aaPredicted RBP15.56■□□□□ 0.08
TSC2-220ENST00000568238 CERKLQ49MI3 558 aaPredicted RBP15.56■□□□□ 0.08
TSC2-220ENST00000568238 LCORLQ8N3X6 602 aa15.56■□□□□ 0.08
TSC2-220ENST00000568238 FEZ1Q99689 392 aa15.56■□□□□ 0.08
TSC2-220ENST00000568238 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.56■□□□□ 0.082e-9■■■■□ 20.5
TSC2-220ENST00000568238 RWDD1Q9H446 243 aaPredicted RBP15.56■□□□□ 0.08
TSC2-220ENST00000568238 PLXNB2O15031 1838 aa15.56■□□□□ 0.08
TSC2-220ENST00000568238 SMARCA5O60264 1052 aaPredicted RBP15.55■□□□□ 0.08
TSC2-220ENST00000568238 ADCY3O60266 1144 aa15.55■□□□□ 0.08
TSC2-220ENST00000568238 IGHDP01880 384 aa15.55■□□□□ 0.08
TSC2-220ENST00000568238 CCL5P13501 91 aa15.55■□□□□ 0.08
TSC2-220ENST00000568238 SHMT1P34896 483 aa15.55■□□□□ 0.08
TSC2-220ENST00000568238 ADD2P35612 726 aa15.55■□□□□ 0.08
TSC2-220ENST00000568238 PLCD1P51178 756 aa15.55■□□□□ 0.08
TSC2-220ENST00000568238 IRF5Q13568 498 aa15.55■□□□□ 0.08
TSC2-220ENST00000568238 RAB3GAP1Q15042 981 aa15.55■□□□□ 0.08
TSC2-220ENST00000568238 ABCB5Q2M3G0 1257 aa15.55■□□□□ 0.08
TSC2-220ENST00000568238 USP17L2Q6R6M4 530 aa15.55■□□□□ 0.08
TSC2-220ENST00000568238 SDR42E1Q8WUS8 393 aa15.55■□□□□ 0.08
TSC2-220ENST00000568238 MCM9Q9NXL9 1143 aa15.55■□□□□ 0.08
TSC2-220ENST00000568238 TAOK2Q9UL54 1235 aa15.55■□□□□ 0.08
TSC2-220ENST00000568238 MBD4O95243 580 aa15.54■□□□□ 0.08
TSC2-220ENST00000568238 ELNP15502 786 aa15.54■□□□□ 0.08
TSC2-220ENST00000568238 HERVK_113P62684 666 aa15.54■□□□□ 0.08
TSC2-220ENST00000568238 NKX2-3Q8TAU0 364 aa15.54■□□□□ 0.08
TSC2-220ENST00000568238 PXYLP1Q8TE99 480 aa15.54■□□□□ 0.08
TSC2-220ENST00000568238 SHISA4Q96DD7 197 aa15.54■□□□□ 0.08
TSC2-220ENST00000568238 RNF208Q9H0X6 261 aa15.54■□□□□ 0.08
TSC2-220ENST00000568238 ARMT1Q9H993 441 aa15.54■□□□□ 0.08
TSC2-220ENST00000568238 CABP5Q9NP86 173 aa15.54■□□□□ 0.08
TSC2-220ENST00000568238 DCP1AQ9NPI6 582 aaPredicted RBP15.54■□□□□ 0.08
TSC2-220ENST00000568238 MORF4L1Q9UBU8 362 aa15.54■□□□□ 0.08
TSC2-220ENST00000568238 INHAP05111 366 aa15.53■□□□□ 0.08
TSC2-220ENST00000568238 GJB1P08034 283 aa15.53■□□□□ 0.08
TSC2-220ENST00000568238 GABPAQ06546 454 aa15.53■□□□□ 0.08
TSC2-220ENST00000568238 ZYXQ15942 572 aaKnown RBP15.53■□□□□ 0.08
TSC2-220ENST00000568238 GTF3C2Q8WUA4 911 aaPredicted RBP15.53■□□□□ 0.08
TSC2-220ENST00000568238 C12orf42Q96LP6 360 aa15.53■□□□□ 0.08
TSC2-220ENST00000568238 P2RX7Q99572 595 aaKnown RBP15.53■□□□□ 0.08
TSC2-220ENST00000568238 EMILIN3Q9NT22 766 aa15.53■□□□□ 0.08
TSC2-220ENST00000568238 SLC34A2O95436 690 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms