RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 APPP05067 770 aa20.59■□□□□ 0.89
COMMD4-220ENST00000567720 MAP2K1Q02750 393 aaPredicted RBP20.59■□□□□ 0.89
COMMD4-220ENST00000567720 AMOTL1Q8IY63 956 aa20.59■□□□□ 0.89
COMMD4-220ENST00000567720 MS4A4AQ96JQ5 239 aa20.59■□□□□ 0.89
COMMD4-220ENST00000567720 ZBTB21Q9ULJ3 1066 aa20.59■□□□□ 0.89
COMMD4-220ENST00000567720 MANSC4A6NHS7 340 aaPredicted RBP20.58■□□□□ 0.89
COMMD4-220ENST00000567720 SREBF2Q12772 1141 aa20.58■□□□□ 0.89
COMMD4-220ENST00000567720 BMP2KLQ5H9B9 411 aa20.58■□□□□ 0.89
COMMD4-220ENST00000567720 C16orf86Q6ZW13 317 aa20.58■□□□□ 0.89
COMMD4-220ENST00000567720 NAPBQ9H115 298 aa20.58■□□□□ 0.89
COMMD4-220ENST00000567720 KCNH4Q9UQ05 1017 aa20.58■□□□□ 0.89
COMMD4-220ENST00000567720 ZMYM6O95789 1325 aa20.57■□□□□ 0.88
COMMD4-220ENST00000567720 RAD50Q92878 1312 aa20.57■□□□□ 0.88
COMMD4-220ENST00000567720 IGF2BP3O00425 579 aaKnown RBP eCLIP20.57■□□□□ 0.88
COMMD4-220ENST00000567720 CHMLP26374 656 aa20.57■□□□□ 0.88
COMMD4-220ENST00000567720 BRI3BPQ8WY22 251 aa20.57■□□□□ 0.88
COMMD4-220ENST00000567720 NACAP1Q9BZK3 213 aa20.57■□□□□ 0.88
COMMD4-220ENST00000567720 SWAP70Q9UH65 585 aa20.57■□□□□ 0.88
COMMD4-220ENST00000567720 TESPA1A2RU30 521 aaPredicted RBP20.56■□□□□ 0.88
COMMD4-220ENST00000567720 MINDY4BA8MYZ0 360 aa20.56■□□□□ 0.88
COMMD4-220ENST00000567720 GH2P01242 217 aa20.56■□□□□ 0.88
COMMD4-220ENST00000567720 ASNSP08243 561 aa20.56■□□□□ 0.88
COMMD4-220ENST00000567720 HSPD1P10809 573 aaKnown RBP20.56■□□□□ 0.88
COMMD4-220ENST00000567720 TM4SF4P48230 202 aa20.56■□□□□ 0.88
COMMD4-220ENST00000567720 REM2Q8IYK8 340 aaPredicted RBP20.56■□□□□ 0.88
COMMD4-220ENST00000567720 AFG3L2Q9Y4W6 797 aa20.56■□□□□ 0.88
COMMD4-220ENST00000567720 ZHX2Q9Y6X8 837 aa20.56■□□□□ 0.88
COMMD4-220ENST00000567720 PARP14Q460N5 1801 aa20.55■□□□□ 0.88
COMMD4-220ENST00000567720 CCL15-CCL14A0A0B4J2E2 113 aa20.55■□□□□ 0.88
COMMD4-220ENST00000567720 FOXN1O15353 648 aa20.55■□□□□ 0.88
COMMD4-220ENST00000567720 CDK8P49336 464 aa20.55■□□□□ 0.88
COMMD4-220ENST00000567720 GTF2A2P52657 109 aa20.55■□□□□ 0.88
COMMD4-220ENST00000567720 SNAPC2Q13487 334 aa20.55■□□□□ 0.88
COMMD4-220ENST00000567720 CCL15Q16663 113 aa20.55■□□□□ 0.88
COMMD4-220ENST00000567720 CERKLQ49MI3 558 aaPredicted RBP20.55■□□□□ 0.88
COMMD4-220ENST00000567720 PTPN18Q99952 460 aa20.55■□□□□ 0.88
COMMD4-220ENST00000567720 TAOK2Q9UL54 1235 aa20.55■□□□□ 0.88
COMMD4-220ENST00000567720 CASP8AP2Q9UKL3 1982 aa20.54■□□□□ 0.88
COMMD4-220ENST00000567720 TRIM75PA6NK02 468 aa20.54■□□□□ 0.88
COMMD4-220ENST00000567720 MFAP1P55081 439 aaKnown RBP20.54■□□□□ 0.88
COMMD4-220ENST00000567720 PPARAQ07869 468 aa20.54■□□□□ 0.88
COMMD4-220ENST00000567720 MOGSQ13724 837 aa20.54■□□□□ 0.88
COMMD4-220ENST00000567720 ALX1Q15699 326 aa20.54■□□□□ 0.88
COMMD4-220ENST00000567720 ABCB5Q2M3G0 1257 aa20.54■□□□□ 0.88
COMMD4-220ENST00000567720 STK11IPQ8N1F8 1099 aa20.54■□□□□ 0.88
COMMD4-220ENST00000567720 GINM1Q9NU53 330 aa20.54■□□□□ 0.88
COMMD4-220ENST00000567720 TSKSQ9UJT2 592 aa20.54■□□□□ 0.88
COMMD4-220ENST00000567720 A0A0G2JLL6 359 aaPredicted RBP20.53■□□□□ 0.88
COMMD4-220ENST00000567720 USP17L5A8MUK1 530 aa20.53■□□□□ 0.88
COMMD4-220ENST00000567720 AKR1B1P15121 316 aa20.53■□□□□ 0.88
COMMD4-220ENST00000567720 GUCY1A2P33402 732 aa20.53■□□□□ 0.88
COMMD4-220ENST00000567720 PRRT2Q7Z6L0 340 aaPredicted RBP20.53■□□□□ 0.88
COMMD4-220ENST00000567720 IFNL1Q8IU54 200 aa20.53■□□□□ 0.88
COMMD4-220ENST00000567720 RNF186Q9NXI6 227 aa20.53■□□□□ 0.88
COMMD4-220ENST00000567720 ZSWIM8A7E2V4 1837 aa20.53■□□□□ 0.88
COMMD4-220ENST00000567720 CXCL11O14625 94 aa20.52■□□□□ 0.88
COMMD4-220ENST00000567720 FGAP02671 866 aa20.52■□□□□ 0.88
COMMD4-220ENST00000567720 CETPP11597 493 aa20.52■□□□□ 0.88
COMMD4-220ENST00000567720 ZNF280CQ8ND82 737 aa20.52■□□□□ 0.88
COMMD4-220ENST00000567720 BEGAINQ9BUH8 593 aa20.52■□□□□ 0.88
COMMD4-220ENST00000567720 SAGE1Q9NXZ1 904 aa20.52■□□□□ 0.88
COMMD4-220ENST00000567720 SGSM2O43147 1006 aa20.51■□□□□ 0.87
COMMD4-220ENST00000567720 HSPA8P11142 646 aaKnown RBP20.51■□□□□ 0.87
COMMD4-220ENST00000567720 RASA1P20936 1047 aa20.51■□□□□ 0.87
COMMD4-220ENST00000567720 INHBEP58166 350 aa20.51■□□□□ 0.87
COMMD4-220ENST00000567720 DGKZQ13574 1117 aa20.51■□□□□ 0.87
COMMD4-220ENST00000567720 CLEC10AQ8IUN9 316 aa20.51■□□□□ 0.87
COMMD4-220ENST00000567720 FAM43AQ8N2R8 423 aa20.51■□□□□ 0.87
COMMD4-220ENST00000567720 WDR18Q9BV38 432 aa20.51■□□□□ 0.87
COMMD4-220ENST00000567720 TBC1D2Q9BYX2 928 aa20.51■□□□□ 0.87
COMMD4-220ENST00000567720 PLIN4Q96Q06 1357 aa20.5■□□□□ 0.87
COMMD4-220ENST00000567720 BTBD19C9JJ37 291 aa20.5■□□□□ 0.87
COMMD4-220ENST00000567720 MPHOSPH10O00566 681 aaKnown RBP20.5■□□□□ 0.87
COMMD4-220ENST00000567720 CA12O43570 354 aa20.5■□□□□ 0.87
COMMD4-220ENST00000567720 PRDM1O75626 825 aa20.5■□□□□ 0.87
COMMD4-220ENST00000567720 TRPA1O75762 1119 aa20.5■□□□□ 0.87
COMMD4-220ENST00000567720 CTDSPL2Q05D32 466 aa20.5■□□□□ 0.87
COMMD4-220ENST00000567720 SPP2Q13103 211 aa20.5■□□□□ 0.87
COMMD4-220ENST00000567720 MTMR2Q13614 643 aa20.5■□□□□ 0.87
COMMD4-220ENST00000567720 SEPT2Q15019 361 aa20.5■□□□□ 0.87
COMMD4-220ENST00000567720 RAB3GAP1Q15042 981 aa20.5■□□□□ 0.87
COMMD4-220ENST00000567720 RUFY2Q8WXA3 655 aa20.5■□□□□ 0.87
COMMD4-220ENST00000567720 DSCC1Q9BVC3 393 aa20.5■□□□□ 0.87
COMMD4-220ENST00000567720 NBPF3Q9H094 633 aa20.5■□□□□ 0.87
COMMD4-220ENST00000567720 AS3MTQ9HBK9 375 aa20.5■□□□□ 0.87
COMMD4-220ENST00000567720 ANAPC4Q9UJX5 808 aa20.5■□□□□ 0.87
COMMD4-220ENST00000567720 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.5■□□□□ 0.87
COMMD4-220ENST00000567720 TACC3Q9Y6A5 838 aa20.5■□□□□ 0.87
COMMD4-220ENST00000567720 TMEM179Q6ZVK1 233 aa20.49■□□□□ 0.87
COMMD4-220ENST00000567720 CABP5Q9NP86 173 aa20.49■□□□□ 0.87
COMMD4-220ENST00000567720 RLFQ13129 1914 aa20.49■□□□□ 0.87
COMMD4-220ENST00000567720 A0A0G2JMZ2 1700 aa20.48■□□□□ 0.87
COMMD4-220ENST00000567720 HMGCS2P54868 508 aa20.48■□□□□ 0.87
COMMD4-220ENST00000567720 HAND2P61296 217 aa20.48■□□□□ 0.87
COMMD4-220ENST00000567720 GPAT2Q6NUI2 795 aa20.48■□□□□ 0.87
COMMD4-220ENST00000567720 TBC1D10CQ8IV04 446 aa20.48■□□□□ 0.87
COMMD4-220ENST00000567720 CCDC17Q96LX7 622 aa20.48■□□□□ 0.87
COMMD4-220ENST00000567720 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.48■□□□□ 0.87
COMMD4-220ENST00000567720 CFHR5Q9BXR6 569 aa20.48■□□□□ 0.87
COMMD4-220ENST00000567720 MGAMO43451 1857 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms