RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 IL25Q9H293 177 aa14.88□□□□□ -0.03
RNF40-211ENST00000567365 GINM1Q9NU53 330 aa14.88□□□□□ -0.03
RNF40-211ENST00000567365 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.88□□□□□ -0.03
RNF40-211ENST00000567365 AFG3L2Q9Y4W6 797 aa14.88□□□□□ -0.03
RNF40-211ENST00000567365 INHBEP58166 350 aa14.87□□□□□ -0.03
RNF40-211ENST00000567365 ALX1Q15699 326 aa14.87□□□□□ -0.03
RNF40-211ENST00000567365 C16orf86Q6ZW13 317 aa14.87□□□□□ -0.03
RNF40-211ENST00000567365 SLC44A5Q8NCS7 719 aa14.87□□□□□ -0.03
RNF40-211ENST00000567365 BRI3BPQ8WY22 251 aa14.87□□□□□ -0.03
RNF40-211ENST00000567365 DYNLL2Q96FJ2 89 aa14.87□□□□□ -0.03
RNF40-211ENST00000567365 ARPP21Q9UBL0 812 aaPredicted RBP14.87□□□□□ -0.03
RNF40-211ENST00000567365 MYH8P13535 1937 aa14.87□□□□□ -0.03
RNF40-211ENST00000567365 GREB1LQ9C091 1923 aaPredicted RBP14.87□□□□□ -0.03
RNF40-211ENST00000567365 CCDC171Q6TFL3 1326 aa14.87□□□□□ -0.03
RNF40-211ENST00000567365 CCDC85CA6NKD9 419 aa14.86□□□□□ -0.03
RNF40-211ENST00000567365 HIP1O00291 1037 aa14.86□□□□□ -0.03
RNF40-211ENST00000567365 IGF2BP3O00425 579 aaKnown RBP eCLIP14.86□□□□□ -0.03
RNF40-211ENST00000567365 CXCL11O14625 94 aa14.86□□□□□ -0.03
RNF40-211ENST00000567365 ASNSP08243 561 aa14.86□□□□□ -0.03
RNF40-211ENST00000567365 GTF2A2P52657 109 aa14.86□□□□□ -0.03
RNF40-211ENST00000567365 SREBF2Q12772 1141 aa14.86□□□□□ -0.03
RNF40-211ENST00000567365 BMP2KLQ5H9B9 411 aa14.86□□□□□ -0.03
RNF40-211ENST00000567365 CCDC84Q86UT8 332 aaPredicted RBP14.86□□□□□ -0.03
RNF40-211ENST00000567365 CFHR5Q9BXR6 569 aa14.86□□□□□ -0.03
RNF40-211ENST00000567365 PICK1Q9NRD5 415 aa14.86□□□□□ -0.03
RNF40-211ENST00000567365 RNF186Q9NXI6 227 aa14.86□□□□□ -0.03
RNF40-211ENST00000567365 SWAP70Q9UH65 585 aa14.86□□□□□ -0.03
RNF40-211ENST00000567365 ZBTB21Q9ULJ3 1066 aa14.86□□□□□ -0.03
RNF40-211ENST00000567365 ZHX2Q9Y6X8 837 aa14.86□□□□□ -0.03
RNF40-211ENST00000567365 ZMYM6O95789 1325 aa14.86□□□□□ -0.03
RNF40-211ENST00000567365 CHMLP26374 656 aa14.85□□□□□ -0.03
RNF40-211ENST00000567365 GUCY1A2P33402 732 aa14.85□□□□□ -0.03
RNF40-211ENST00000567365 CDK8P49336 464 aa14.85□□□□□ -0.03
RNF40-211ENST00000567365 IFNL1Q8IU54 200 aa14.85□□□□□ -0.03
RNF40-211ENST00000567365 BEGAINQ9BUH8 593 aa14.85□□□□□ -0.03
RNF40-211ENST00000567365 WDR18Q9BV38 432 aa14.85□□□□□ -0.03
RNF40-211ENST00000567365 SAGE1Q9NXZ1 904 aa14.85□□□□□ -0.03
RNF40-211ENST00000567365 LOC285556D6RIA3 1793 aa14.85□□□□□ -0.03
RNF40-211ENST00000567365 CCL15-CCL14A0A0B4J2E2 113 aa14.84□□□□□ -0.03
RNF40-211ENST00000567365 A0A0G2JLL6 359 aaPredicted RBP14.84□□□□□ -0.03
RNF40-211ENST00000567365 CA12O43570 354 aa14.84□□□□□ -0.03
RNF40-211ENST00000567365 GDF11O95390 407 aa14.84□□□□□ -0.03
RNF40-211ENST00000567365 HSPD1P10809 573 aaKnown RBP14.84□□□□□ -0.03
RNF40-211ENST00000567365 SNAPC2Q13487 334 aa14.84□□□□□ -0.03
RNF40-211ENST00000567365 CCL15Q16663 113 aa14.84□□□□□ -0.03
RNF40-211ENST00000567365 CERKLQ49MI3 558 aaPredicted RBP14.84□□□□□ -0.03
RNF40-211ENST00000567365 CWC27Q6UX04 472 aaKnown RBP14.84□□□□□ -0.03
RNF40-211ENST00000567365 PRRT2Q7Z6L0 340 aaPredicted RBP14.84□□□□□ -0.03
RNF40-211ENST00000567365 DDRGK1Q96HY6 314 aa14.84□□□□□ -0.03
RNF40-211ENST00000567365 TBC1D2Q9BYX2 928 aa14.84□□□□□ -0.03
RNF40-211ENST00000567365 DIAPH3Q9NSV4 1193 aa14.84□□□□□ -0.03
RNF40-211ENST00000567365 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.84□□□□□ -0.03
RNF40-211ENST00000567365 ANAPC4Q9UJX5 808 aa14.84□□□□□ -0.03
RNF40-211ENST00000567365 LAMA4Q16363 1823 aa14.83□□□□□ -0.04
RNF40-211ENST00000567365 USP17L5A8MUK1 530 aa14.83□□□□□ -0.04
RNF40-211ENST00000567365 GH2P01242 217 aa14.83□□□□□ -0.04
RNF40-211ENST00000567365 FGAP02671 866 aa14.83□□□□□ -0.04
RNF40-211ENST00000567365 CETPP11597 493 aa14.83□□□□□ -0.04
RNF40-211ENST00000567365 TDO2P48775 406 aa14.83□□□□□ -0.04
RNF40-211ENST00000567365 RGS19P49795 217 aa14.83□□□□□ -0.04
RNF40-211ENST00000567365 SH3D19Q5HYK7 790 aa14.83□□□□□ -0.04
RNF40-211ENST00000567365 GPAT2Q6NUI2 795 aa14.83□□□□□ -0.04
RNF40-211ENST00000567365 ZNF280CQ8ND82 737 aa14.83□□□□□ -0.04
RNF40-211ENST00000567365 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.83□□□□□ -0.04
RNF40-211ENST00000567365 TRIM34Q9BYJ4 488 aa14.83□□□□□ -0.04
RNF40-211ENST00000567365 NACAP1Q9BZK3 213 aa14.83□□□□□ -0.04
RNF40-211ENST00000567365 ZCCHC17Q9NP64 241 aaKnown RBP14.83□□□□□ -0.04
RNF40-211ENST00000567365 TACC3Q9Y6A5 838 aa14.83□□□□□ -0.04
RNF40-211ENST00000567365 RAD50Q92878 1312 aa14.83□□□□□ -0.04
RNF40-211ENST00000567365 APPP05067 770 aa14.82□□□□□ -0.04
RNF40-211ENST00000567365 FGRP09769 529 aa14.82□□□□□ -0.04
RNF40-211ENST00000567365 RASA1P20936 1047 aa14.82□□□□□ -0.04
RNF40-211ENST00000567365 PPARAQ07869 468 aa14.82□□□□□ -0.04
RNF40-211ENST00000567365 ABCB5Q2M3G0 1257 aa14.82□□□□□ -0.04
RNF40-211ENST00000567365 SIAH1Q8IUQ4 282 aa14.82□□□□□ -0.04
RNF40-211ENST00000567365 AMOTL1Q8IY63 956 aa14.82□□□□□ -0.04
RNF40-211ENST00000567365 FAM43AQ8N2R8 423 aa14.82□□□□□ -0.04
RNF40-211ENST00000567365 CCDC17Q96LX7 622 aa14.82□□□□□ -0.04
RNF40-211ENST00000567365 MCOLN1Q9GZU1 580 aa14.82□□□□□ -0.04
RNF40-211ENST00000567365 NAPBQ9H115 298 aa14.82□□□□□ -0.04
RNF40-211ENST00000567365 R3HDMLQ9H3Y0 253 aa14.82□□□□□ -0.04
RNF40-211ENST00000567365 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.82□□□□□ -0.04
RNF40-211ENST00000567365 MINDY4BA8MYZ0 360 aa14.81□□□□□ -0.04
RNF40-211ENST00000567365 BTBD19C9JJ37 291 aa14.81□□□□□ -0.04
RNF40-211ENST00000567365 SGSM2O43147 1006 aa14.81□□□□□ -0.04
RNF40-211ENST00000567365 TRPA1O75762 1119 aa14.81□□□□□ -0.04
RNF40-211ENST00000567365 SLC34A2O95436 690 aa14.81□□□□□ -0.04
RNF40-211ENST00000567365 AKR1B1P15121 316 aa14.81□□□□□ -0.04
RNF40-211ENST00000567365 SPP2Q13103 211 aa14.81□□□□□ -0.04
RNF40-211ENST00000567365 NOM1Q5C9Z4 860 aaKnown RBP14.81□□□□□ -0.04
RNF40-211ENST00000567365 DSCC1Q9BVC3 393 aa14.81□□□□□ -0.04
RNF40-211ENST00000567365 NBPF3Q9H094 633 aa14.81□□□□□ -0.04
RNF40-211ENST00000567365 ALDH1A1P00352 501 aa14.8□□□□□ -0.04
RNF40-211ENST00000567365 MFAP1P55081 439 aaKnown RBP14.8□□□□□ -0.04
RNF40-211ENST00000567365 BACE1P56817 501 aa14.8□□□□□ -0.04
RNF40-211ENST00000567365 MLLT1Q03111 559 aaPredicted RBP14.8□□□□□ -0.04
RNF40-211ENST00000567365 SEPT2Q15019 361 aa14.8□□□□□ -0.04
RNF40-211ENST00000567365 TMEM179Q6ZVK1 233 aa14.8□□□□□ -0.04
RNF40-211ENST00000567365 ANKRD23Q86SG2 305 aa14.8□□□□□ -0.04
RNF40-211ENST00000567365 HTTP42858 3142 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms