RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 ZNF746Q6NUN9 644 aaPredicted RBP6.25□□□□□ -1.41
CDH1-211ENST00000567320 LETMD1Q6P1Q0 360 aa6.25□□□□□ -1.41
CDH1-211ENST00000567320 MPZL3Q6UWV2 235 aa6.25□□□□□ -1.41
CDH1-211ENST00000567320 ANKRD24Q8TF21 1146 aa6.25□□□□□ -1.41
CDH1-211ENST00000567320 FAM53CQ9NYF3 392 aa6.25□□□□□ -1.41
CDH1-211ENST00000567320 CYP7A1P22680 504 aa6.24□□□□□ -1.41
CDH1-211ENST00000567320 GNA15P30679 374 aa6.24□□□□□ -1.41
CDH1-211ENST00000567320 PRAMEF13Q5VWM6 474 aa6.24□□□□□ -1.41
CDH1-211ENST00000567320 RIN3Q8TB24 985 aa6.24□□□□□ -1.41
CDH1-211ENST00000567320 GAL3ST3Q96A11 431 aa6.24□□□□□ -1.41
CDH1-211ENST00000567320 LMCD1Q9NZU5 365 aa6.24□□□□□ -1.41
CDH1-211ENST00000567320 CTNND2Q9UQB3 1225 aa6.24□□□□□ -1.41
CDH1-211ENST00000567320 DIEXFQ68CQ4 756 aaKnown RBP6.23□□□□□ -1.41
CDH1-211ENST00000567320 NPAS4Q8IUM7 802 aa6.23□□□□□ -1.41
CDH1-211ENST00000567320 UBE2FQ969M7 185 aa6.23□□□□□ -1.41
CDH1-211ENST00000567320 LIN37Q96GY3 246 aaPredicted RBP6.23□□□□□ -1.41
CDH1-211ENST00000567320 FAM84AQ96KN4 292 aa6.23□□□□□ -1.41
CDH1-211ENST00000567320 MIR1-1HGQ9H1L0 117 aa6.23□□□□□ -1.41
CDH1-211ENST00000567320 ZSWIM5Q9P217 1185 aa6.23□□□□□ -1.41
CDH1-211ENST00000567320 PCDHB5Q9Y5E4 795 aa6.23□□□□□ -1.41
CDH1-211ENST00000567320 CNTNAP4Q9C0A0 1308 aa6.23□□□□□ -1.41
CDH1-211ENST00000567320 DBX1A6NMT0 343 aa6.22□□□□□ -1.41
CDH1-211ENST00000567320 PATL2C9JE40 543 aaKnown RBP6.22□□□□□ -1.41
CDH1-211ENST00000567320 PRPF40AO75400 957 aaKnown RBP6.22□□□□□ -1.41
CDH1-211ENST00000567320 PGRP06401 933 aa6.22□□□□□ -1.41
CDH1-211ENST00000567320 TMEM67Q5HYA8 995 aa6.22□□□□□ -1.41
CDH1-211ENST00000567320 FYB2Q5VWT5 728 aa6.22□□□□□ -1.41
CDH1-211ENST00000567320 CDH24Q86UP0 819 aa6.22□□□□□ -1.41
CDH1-211ENST00000567320 KIRREL1Q96J84 757 aa6.22□□□□□ -1.41
CDH1-211ENST00000567320 DUSP9Q99956 384 aaKnown RBP6.22□□□□□ -1.41
CDH1-211ENST00000567320 DPH2Q9BQC3 489 aaPredicted RBP6.22□□□□□ -1.41
CDH1-211ENST00000567320 SEMA3GQ9NS98 782 aa6.22□□□□□ -1.41
CDH1-211ENST00000567320 ZNF503-AS2A6NEH8 195 aa6.21□□□□□ -1.42
CDH1-211ENST00000567320 CST3P01034 146 aaPredicted RBP6.21□□□□□ -1.42
CDH1-211ENST00000567320 RPS26P62854 115 aaKnown RBP6.21□□□□□ -1.42
CDH1-211ENST00000567320 EAPPQ56P03 285 aaPredicted RBP6.21□□□□□ -1.42
CDH1-211ENST00000567320 JARID2Q92833 1246 aaPredicted RBP6.21□□□□□ -1.42
CDH1-211ENST00000567320 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.21□□□□□ -1.42
CDH1-211ENST00000567320 SLAMF8Q9P0V8 285 aa6.21□□□□□ -1.42
CDH1-211ENST00000567320 AK5Q9Y6K8 562 aa6.21□□□□□ -1.42
CDH1-211ENST00000567320 CAPN6Q9Y6Q1 641 aa6.21□□□□□ -1.42
CDH1-211ENST00000567320 GLI1P08151 1106 aa6.2□□□□□ -1.42
CDH1-211ENST00000567320 ZNF865P0CJ78 1059 aaPredicted RBP6.2□□□□□ -1.42
CDH1-211ENST00000567320 CAP2P40123 477 aa6.2□□□□□ -1.42
CDH1-211ENST00000567320 PDE4BQ07343 736 aa6.2□□□□□ -1.42
CDH1-211ENST00000567320 ANKRD33BA6NCL7 494 aa6.19□□□□□ -1.42
CDH1-211ENST00000567320 RAC2P15153 192 aa6.19□□□□□ -1.42
CDH1-211ENST00000567320 RAP1GAPP47736 663 aa6.19□□□□□ -1.42
CDH1-211ENST00000567320 LIG3P49916 1009 aa6.19□□□□□ -1.42
CDH1-211ENST00000567320 AGMOQ6ZNB7 445 aa6.19□□□□□ -1.42
CDH1-211ENST00000567320 C22orf34Q6ZV56 151 aa6.19□□□□□ -1.42
CDH1-211ENST00000567320 CCDC120Q96HB5 630 aa6.19□□□□□ -1.42
CDH1-211ENST00000567320 RNF19AQ9NV58 838 aa6.19□□□□□ -1.42
CDH1-211ENST00000567320 ST14Q9Y5Y6 855 aa6.19□□□□□ -1.42
CDH1-211ENST00000567320 ARID1BQ8NFD5 2236 aaPredicted RBP6.18□□□□□ -1.42
CDH1-211ENST00000567320 GFRA2O00451 464 aa6.18□□□□□ -1.42
CDH1-211ENST00000567320 GDNFP39905 211 aa6.18□□□□□ -1.42
CDH1-211ENST00000567320 ETV3P41162 512 aa6.18□□□□□ -1.42
CDH1-211ENST00000567320 KIR3DL1P43629 444 aa6.18□□□□□ -1.42
CDH1-211ENST00000567320 PSMD2Q13200 908 aa6.18□□□□□ -1.42
CDH1-211ENST00000567320 TSNAXIP1Q2TAA8 658 aa6.18□□□□□ -1.42
CDH1-211ENST00000567320 MEI1Q5TIA1 1274 aa6.18□□□□□ -1.42
CDH1-211ENST00000567320 PRR23BQ6ZRT6 265 aa6.18□□□□□ -1.42
CDH1-211ENST00000567320 THAP5Q7Z6K1 395 aa6.18□□□□□ -1.42
CDH1-211ENST00000567320 TTC6Q86TZ1 520 aa6.18□□□□□ -1.42
CDH1-211ENST00000567320 TMEM87BQ96K49 555 aa6.18□□□□□ -1.42
CDH1-211ENST00000567320 COX4I2Q96KJ9 171 aa6.18□□□□□ -1.42
CDH1-211ENST00000567320 ALPK1Q96QP1 1244 aa6.18□□□□□ -1.42
CDH1-211ENST00000567320 DIRC2Q96SL1 478 aa6.18□□□□□ -1.42
CDH1-211ENST00000567320 TJP2Q9UDY2 1190 aa6.18□□□□□ -1.42
CDH1-211ENST00000567320 XPCQ01831 940 aaPredicted RBP6.17□□□□□ -1.42
CDH1-211ENST00000567320 TNK2Q07912 1038 aa6.17□□□□□ -1.42
CDH1-211ENST00000567320 MESP2Q0VG99 397 aa6.17□□□□□ -1.42
CDH1-211ENST00000567320 SLC6A19Q695T7 634 aa6.17□□□□□ -1.42
CDH1-211ENST00000567320 SYDE1Q6ZW31 735 aaPredicted RBP6.17□□□□□ -1.42
CDH1-211ENST00000567320 CREG2Q8IUH2 290 aa6.17□□□□□ -1.42
CDH1-211ENST00000567320 AEBP1Q8IUX7 1158 aa6.17□□□□□ -1.42
CDH1-211ENST00000567320 TLR6Q9Y2C9 796 aa6.17□□□□□ -1.42
CDH1-211ENST00000567320 RBAK-RBAKDNI3L0D1 243 aa6.16□□□□□ -1.42
CDH1-211ENST00000567320 BPNT1O95861 308 aa6.16□□□□□ -1.42
CDH1-211ENST00000567320 RLBP1P12271 317 aa6.16□□□□□ -1.42
CDH1-211ENST00000567320 TFE3P19532 575 aaPredicted RBP6.16□□□□□ -1.42
CDH1-211ENST00000567320 HK2P52789 917 aa6.16□□□□□ -1.42
CDH1-211ENST00000567320 RPL6Q02878 288 aaKnown RBP6.16□□□□□ -1.42
CDH1-211ENST00000567320 MRPL41Q8IXM3 137 aaKnown RBP6.16□□□□□ -1.42
CDH1-211ENST00000567320 PPP1R16BQ96T49 567 aa6.16□□□□□ -1.42
CDH1-211ENST00000567320 TRAIPQ9BWF2 469 aa6.16□□□□□ -1.42
CDH1-211ENST00000567320 NSUN3Q9H649 340 aaKnown RBP6.16□□□□□ -1.42
CDH1-211ENST00000567320 PARP2Q9UGN5 583 aa6.16□□□□□ -1.42
CDH1-211ENST00000567320 TACC3Q9Y6A5 838 aa6.16□□□□□ -1.42
CDH1-211ENST00000567320 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.15□□□□□ -1.42
CDH1-211ENST00000567320 F6X3S4 739 aa6.15□□□□□ -1.42
CDH1-211ENST00000567320 PLCG1P19174 1290 aa6.15□□□□□ -1.42
CDH1-211ENST00000567320 TAF1CQ15572 869 aaPredicted RBP6.15□□□□□ -1.42
CDH1-211ENST00000567320 TMPRSS7Q7RTY8 843 aa6.15□□□□□ -1.42
CDH1-211ENST00000567320 ANKLE2Q86XL3 938 aa6.15□□□□□ -1.42
CDH1-211ENST00000567320 FAM13CQ8NE31 585 aa6.15□□□□□ -1.42
CDH1-211ENST00000567320 ABHD4Q8TB40 342 aa6.15□□□□□ -1.42
CDH1-211ENST00000567320 PIWIL2Q8TC59 973 aaKnown RBP6.15□□□□□ -1.42
CDH1-211ENST00000567320 TOX2Q96NM4 488 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms