RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 IRX3P78415 501 aaPredicted RBP18.26■□□□□ 0.51
RNF40-209ENST00000566703 JAG1P78504 1218 aa18.26■□□□□ 0.51
RNF40-209ENST00000566703 TTC6Q86TZ1 520 aa18.26■□□□□ 0.51
RNF40-209ENST00000566703 AACSQ86V21 672 aa18.26■□□□□ 0.51
RNF40-209ENST00000566703 RPAP2Q8IXW5 612 aaPredicted RBP18.26■□□□□ 0.51
RNF40-209ENST00000566703 MAGEB6Q8N7X4 407 aa18.26■□□□□ 0.51
RNF40-209ENST00000566703 GTF3C2Q8WUA4 911 aaPredicted RBP18.26■□□□□ 0.51
RNF40-209ENST00000566703 P2RX7Q99572 595 aaKnown RBP18.26■□□□□ 0.51
RNF40-209ENST00000566703 PAK6Q9NQU5 681 aaPredicted RBP18.26■□□□□ 0.51
RNF40-209ENST00000566703 COLQQ9Y215 455 aaPredicted RBP18.26■□□□□ 0.51
RNF40-209ENST00000566703 EXOC6BQ9Y2D4 811 aa18.26■□□□□ 0.51
RNF40-209ENST00000566703 MGAMO43451 1857 aa18.26■□□□□ 0.51
RNF40-209ENST00000566703 FARP2O94887 1054 aaPredicted RBP18.25■□□□□ 0.51
RNF40-209ENST00000566703 USP5P45974 858 aa18.25■□□□□ 0.51
RNF40-209ENST00000566703 TTF1Q15361 905 aaPredicted RBP18.25■□□□□ 0.51
RNF40-209ENST00000566703 TATDN1Q6P1N9 297 aa18.25■□□□□ 0.51
RNF40-209ENST00000566703 PANK1Q8TE04 598 aa18.25■□□□□ 0.51
RNF40-209ENST00000566703 CRISPLD2Q9H0B8 497 aa18.25■□□□□ 0.51
RNF40-209ENST00000566703 EHD4Q9H223 541 aa18.25■□□□□ 0.51
RNF40-209ENST00000566703 SAP30BPQ9UHR5 308 aaKnown RBP18.25■□□□□ 0.51
RNF40-209ENST00000566703 TFRCP02786 760 aaKnown RBP18.24■□□□□ 0.51
RNF40-209ENST00000566703 USP17L2Q6R6M4 530 aa18.24■□□□□ 0.51
RNF40-209ENST00000566703 CLASRPQ8N2M8 674 aaKnown RBP18.24■□□□□ 0.51
RNF40-209ENST00000566703 MIGA1Q8NAN2 632 aa18.24■□□□□ 0.51
RNF40-209ENST00000566703 GPRC5AQ8NFJ5 357 aa18.24■□□□□ 0.51
RNF40-209ENST00000566703 RHPN1Q8TCX5 695 aa18.24■□□□□ 0.51
RNF40-209ENST00000566703 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.24■□□□□ 0.51
RNF40-209ENST00000566703 DEFB118Q96PH6 123 aa18.24■□□□□ 0.51
RNF40-209ENST00000566703 ANTXR1Q9H6X2 564 aa18.24■□□□□ 0.51
RNF40-209ENST00000566703 SERPINB13Q9UIV8 391 aa18.24■□□□□ 0.51
RNF40-209ENST00000566703 NR2E3Q9Y5X4 410 aa18.24■□□□□ 0.51
RNF40-209ENST00000566703 MAST2Q6P0Q8 1798 aa18.24■□□□□ 0.51
RNF40-209ENST00000566703 LOC285556D6RIA3 1793 aa18.23■□□□□ 0.51
RNF40-209ENST00000566703 GDF11O95390 407 aa18.23■□□□□ 0.51
RNF40-209ENST00000566703 HERVK_113P62684 666 aa18.23■□□□□ 0.51
RNF40-209ENST00000566703 KIF1BPQ96EK5 621 aa18.23■□□□□ 0.51
RNF40-209ENST00000566703 CHMP4BQ9H444 224 aaKnown RBP18.23■□□□□ 0.51
RNF40-209ENST00000566703 TAOK2Q9UL54 1235 aa18.23■□□□□ 0.51
RNF40-209ENST00000566703 HMMRO75330 724 aa18.22■□□□□ 0.51
RNF40-209ENST00000566703 GH2P01242 217 aa18.22■□□□□ 0.51
RNF40-209ENST00000566703 HMGCRP04035 888 aa18.22■□□□□ 0.51
RNF40-209ENST00000566703 XRCC5P13010 732 aaKnown RBP18.22■□□□□ 0.51
RNF40-209ENST00000566703 FXR1P51114 621 aaKnown RBP eCLIP18.22■□□□□ 0.51
RNF40-209ENST00000566703 C12orf42Q96LP6 360 aa18.22■□□□□ 0.51
RNF40-209ENST00000566703 RIOK1Q9BRS2 568 aaKnown RBP18.22■□□□□ 0.51
RNF40-209ENST00000566703 EMILIN3Q9NT22 766 aa18.22■□□□□ 0.51
RNF40-209ENST00000566703 RBPJLQ9UBG7 517 aa18.22■□□□□ 0.51
RNF40-209ENST00000566703 DDX19BQ9UMR2 479 aa18.22■□□□□ 0.51
RNF40-209ENST00000566703 RPTORQ8N122 1335 aa18.22■□□□□ 0.51
RNF40-209ENST00000566703 RAB11FIP3O75154 756 aa18.21■□□□□ 0.51
RNF40-209ENST00000566703 MAPK4P31152 587 aa18.21■□□□□ 0.51
RNF40-209ENST00000566703 TRMT44Q8IYL2 757 aaKnown RBP18.21■□□□□ 0.51
RNF40-209ENST00000566703 ANKLE1Q8NAG6 615 aa18.21■□□□□ 0.51
RNF40-209ENST00000566703 SOCS4Q8WXH5 440 aa18.21■□□□□ 0.51
RNF40-209ENST00000566703 NUDT12Q9BQG2 462 aa18.21■□□□□ 0.51
RNF40-209ENST00000566703 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.21■□□□□ 0.51
RNF40-209ENST00000566703 HMX1Q9NP08 348 aaPredicted RBP18.21■□□□□ 0.51
RNF40-209ENST00000566703 IL1RAPL2Q9NP60 686 aa18.21■□□□□ 0.51
RNF40-209ENST00000566703 ZBTB40Q9NUA8 1239 aa18.21■□□□□ 0.51
RNF40-209ENST00000566703 NDUFB9Q9Y6M9 179 aa18.21■□□□□ 0.51
RNF40-209ENST00000566703 SIPA1L1O43166 1804 aa18.21■□□□□ 0.51
RNF40-209ENST00000566703 CENPFP49454 3210 aa18.2■□□□□ 0.5
RNF40-209ENST00000566703 USP14P54578 494 aa18.2■□□□□ 0.5
RNF40-209ENST00000566703 SHROOM1Q2M3G4 852 aaPredicted RBP18.2■□□□□ 0.5
RNF40-209ENST00000566703 CERKLQ49MI3 558 aaPredicted RBP18.2■□□□□ 0.5
RNF40-209ENST00000566703 KIAA1683Q9H0B3 1180 aa18.2■□□□□ 0.5
RNF40-209ENST00000566703 TXNRD2Q9NNW7 524 aa18.2■□□□□ 0.5
RNF40-209ENST00000566703 CABP5Q9NP86 173 aa18.2■□□□□ 0.5
RNF40-209ENST00000566703 ATAD5Q96QE3 1844 aa18.2■□□□□ 0.5
RNF40-209ENST00000566703 MAGEB6P1A0A0J9YX57 407 aa18.19■□□□□ 0.5
RNF40-209ENST00000566703 USP17L15C9J2P7 530 aa18.19■□□□□ 0.5
RNF40-209ENST00000566703 USP17L13C9JLJ4 530 aa18.19■□□□□ 0.5
RNF40-209ENST00000566703 USP17L11C9JVI0 530 aa18.19■□□□□ 0.5
RNF40-209ENST00000566703 USP17L18D6R9N7 530 aa18.19■□□□□ 0.5
RNF40-209ENST00000566703 USP17L22D6RA61 530 aa18.19■□□□□ 0.5
RNF40-209ENST00000566703 USP17L17D6RBQ6 530 aa18.19■□□□□ 0.5
RNF40-209ENST00000566703 USP17L19D6RCP7 530 aa18.19■□□□□ 0.5
RNF40-209ENST00000566703 USP17L20D6RJB6 530 aa18.19■□□□□ 0.5
RNF40-209ENST00000566703 IFIT2P09913 472 aaKnown RBP18.19■□□□□ 0.5
RNF40-209ENST00000566703 ERVK-9P63128 1117 aa18.19■□□□□ 0.5
RNF40-209ENST00000566703 ERVK-24P63145 666 aa18.19■□□□□ 0.5
RNF40-209ENST00000566703 USP17L24Q0WX57 530 aa18.19■□□□□ 0.5
RNF40-209ENST00000566703 ABCB5Q2M3G0 1257 aa18.19■□□□□ 0.5
RNF40-209ENST00000566703 Q3C1V9 767 aa18.19■□□□□ 0.5
RNF40-209ENST00000566703 SLC9C2Q5TAH2 1124 aa18.19■□□□□ 0.5
RNF40-209ENST00000566703 CRNKL1Q9BZJ0 848 aaKnown RBP18.19■□□□□ 0.5
RNF40-209ENST00000566703 MKI67P46013 3256 aaKnown RBP18.18■□□□□ 0.5
RNF40-209ENST00000566703 PDE6AP16499 860 aa18.18■□□□□ 0.5
RNF40-209ENST00000566703 PLCD1P51178 756 aa18.18■□□□□ 0.5
RNF40-209ENST00000566703 GABPAQ06546 454 aa18.18■□□□□ 0.5
RNF40-209ENST00000566703 NECAB2Q7Z6G3 386 aa18.18■□□□□ 0.5
RNF40-209ENST00000566703 CCAR1Q8IX12 1150 aaKnown RBP18.18■□□□□ 0.5
RNF40-209ENST00000566703 RABGAP1Q9Y3P9 1069 aa18.18■□□□□ 0.5
RNF40-209ENST00000566703 FOCADQ5VW36 1801 aa18.18■□□□□ 0.5
RNF40-209ENST00000566703 DOCK3Q8IZD9 2030 aa18.18■□□□□ 0.5
RNF40-209ENST00000566703 POLR3DP05423 398 aaPredicted RBP18.17■□□□□ 0.5
RNF40-209ENST00000566703 CYP2B6P20813 491 aa18.17■□□□□ 0.5
RNF40-209ENST00000566703 PDE3AQ14432 1141 aa18.17■□□□□ 0.5
RNF40-209ENST00000566703 RAB3GAP1Q15042 981 aa18.17■□□□□ 0.5
RNF40-209ENST00000566703 MAP3K21Q5TCX8 1036 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms