RNA–Protein interactions for RNA: ENST00000566655.1

VAC14-208, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 5

Gene VAC14, Length 1,391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-208ENST00000566655 ZNF280AP59817 542 aaPredicted RBP18.52■□□□□ 0.55
VAC14-208ENST00000566655 HMGN5P82970 282 aaKnown RBP18.52■□□□□ 0.55
VAC14-208ENST00000566655 TNIP1Q15025 636 aa18.52■□□□□ 0.55
VAC14-208ENST00000566655 METTL16Q86W50 562 aaKnown RBP18.52■□□□□ 0.55
VAC14-208ENST00000566655 MICU3Q86XE3 530 aa18.52■□□□□ 0.55
VAC14-208ENST00000566655 ZNF654Q8IZM8 581 aa18.52■□□□□ 0.55
VAC14-208ENST00000566655 NEDD1Q8NHV4 660 aa18.52■□□□□ 0.55
VAC14-208ENST00000566655 DDX11Q96FC9 970 aa18.52■□□□□ 0.55
VAC14-208ENST00000566655 EHD4Q9H223 541 aa18.52■□□□□ 0.55
VAC14-208ENST00000566655 HDAC9Q9UKV0 1011 aa18.52■□□□□ 0.55
VAC14-208ENST00000566655 SHTN1A0MZ66 631 aa18.51■□□□□ 0.55
VAC14-208ENST00000566655 DDTLA6NHG4 134 aaPredicted RBP18.51■□□□□ 0.55
VAC14-208ENST00000566655 GOLGA8AA7E2F4 631 aa18.51■□□□□ 0.55
VAC14-208ENST00000566655 DHX16O60231 1041 aaKnown RBP18.51■□□□□ 0.55
VAC14-208ENST00000566655 ENTPD3O75355 529 aa18.51■□□□□ 0.55
VAC14-208ENST00000566655 TROAPQ12815 778 aa18.51■□□□□ 0.55
VAC14-208ENST00000566655 SPDYE2Q495Y8 402 aa18.51■□□□□ 0.55
VAC14-208ENST00000566655 IFIT1BQ5T764 474 aaKnown RBP18.51■□□□□ 0.55
VAC14-208ENST00000566655 LARP1BQ659C4 914 aaKnown RBP18.51■□□□□ 0.55
VAC14-208ENST00000566655 ZNF287Q9HBT7 754 aa18.51■□□□□ 0.55
VAC14-208ENST00000566655 ATRNL1Q5VV63 1379 aa18.5■□□□□ 0.55
VAC14-208ENST00000566655 PLIN4Q96Q06 1357 aa18.5■□□□□ 0.55
VAC14-208ENST00000566655 COL2A1P02458 1487 aaPredicted RBP18.5■□□□□ 0.55
VAC14-208ENST00000566655 PDIA4P13667 645 aaKnown RBP18.5■□□□□ 0.55
VAC14-208ENST00000566655 PDCP20941 246 aa18.5■□□□□ 0.55
VAC14-208ENST00000566655 RPS12P25398 132 aaKnown RBP18.5■□□□□ 0.55
VAC14-208ENST00000566655 SHMT1P34896 483 aa18.5■□□□□ 0.55
VAC14-208ENST00000566655 MMP14P50281 582 aa18.5■□□□□ 0.55
VAC14-208ENST00000566655 NBR1Q14596 966 aa18.5■□□□□ 0.55
VAC14-208ENST00000566655 DLGAP5Q15398 846 aa18.5■□□□□ 0.55
VAC14-208ENST00000566655 FOXD4L5Q5VV16 416 aaPredicted RBP18.5■□□□□ 0.55
VAC14-208ENST00000566655 DGKHQ86XP1 1220 aa18.5■□□□□ 0.55
VAC14-208ENST00000566655 ZNF444Q8N0Y2 327 aaPredicted RBP18.5■□□□□ 0.55
VAC14-208ENST00000566655 FOXD4L4Q8WXT5 416 aaPredicted RBP18.5■□□□□ 0.55
VAC14-208ENST00000566655 CHAMP1Q96JM3 812 aa18.5■□□□□ 0.55
VAC14-208ENST00000566655 DHX36Q9H2U1 1008 aaKnown RBP18.5■□□□□ 0.55
VAC14-208ENST00000566655 DNAJC18Q9H819 358 aa18.5■□□□□ 0.55
VAC14-208ENST00000566655 ZNF70Q9UC06 446 aaPredicted RBP18.5■□□□□ 0.55
VAC14-208ENST00000566655 IGKV6D-41A0A0C4DH26 115 aa18.49■□□□□ 0.55
VAC14-208ENST00000566655 PPFIA3O75145 1194 aa18.49■□□□□ 0.55
VAC14-208ENST00000566655 F13A1P00488 732 aa18.49■□□□□ 0.55
VAC14-208ENST00000566655 SLURP2P0DP57 97 aa18.49■□□□□ 0.55
VAC14-208ENST00000566655 CCDC144CPQ8IYA2 1237 aa18.49■□□□□ 0.55
VAC14-208ENST00000566655 OGFOD1Q8N543 542 aa18.49■□□□□ 0.55
VAC14-208ENST00000566655 FANCBQ8NB91 859 aa18.49■□□□□ 0.55
VAC14-208ENST00000566655 ANP32EQ9BTT0 268 aa18.49■□□□□ 0.55
VAC14-208ENST00000566655 SWAP70Q9UH65 585 aa18.49■□□□□ 0.55
VAC14-208ENST00000566655 SERPINB13Q9UIV8 391 aa18.49■□□□□ 0.55
VAC14-208ENST00000566655 ZNF541Q9H0D2 1346 aa18.49■□□□□ 0.55
VAC14-208ENST00000566655 TCP10Q12799 353 aa18.48■□□□□ 0.55
VAC14-208ENST00000566655 CCDC178Q5BJE1 867 aa18.48■□□□□ 0.55
VAC14-208ENST00000566655 FKBP1CQ5VVH2 108 aa18.48■□□□□ 0.55
VAC14-208ENST00000566655 SYNE3Q6ZMZ3 975 aa18.48■□□□□ 0.55
VAC14-208ENST00000566655 CDC37L1Q7L3B6 337 aa18.48■□□□□ 0.55
VAC14-208ENST00000566655 NBPF11Q86T75 865 aa18.48■□□□□ 0.55
VAC14-208ENST00000566655 DPF2Q92785 391 aa18.48■□□□□ 0.55
VAC14-208ENST00000566655 GBP4Q96PP9 640 aa18.48■□□□□ 0.55
VAC14-208ENST00000566655 PGAP2Q9UHJ9 254 aa18.48■□□□□ 0.55
VAC14-208ENST00000566655 TAOK2Q9UL54 1235 aa18.48■□□□□ 0.55
VAC14-208ENST00000566655 CNTNAP1P78357 1384 aa18.48■□□□□ 0.55
VAC14-208ENST00000566655 DDAH1O94760 285 aa18.47■□□□□ 0.55
VAC14-208ENST00000566655 HLA-DOAP06340 250 aa18.47■□□□□ 0.55
VAC14-208ENST00000566655 TSPY3P0CV98 308 aa18.47■□□□□ 0.55
VAC14-208ENST00000566655 TSPY8P0CW00 308 aa18.47■□□□□ 0.55
VAC14-208ENST00000566655 YBX3P16989 372 aaKnown RBP eCLIP18.47■□□□□ 0.551e-6■□□□□ 10.3
VAC14-208ENST00000566655 IFNAR1P17181 557 aa18.47■□□□□ 0.55
VAC14-208ENST00000566655 GMPSP49915 693 aaPredicted RBP18.47■□□□□ 0.55
VAC14-208ENST00000566655 FUT2Q10981 343 aa18.47■□□□□ 0.55
VAC14-208ENST00000566655 RTN1Q16799 776 aa18.47■□□□□ 0.55
VAC14-208ENST00000566655 ARHGAP27Q6ZUM4 889 aa18.47■□□□□ 0.55
VAC14-208ENST00000566655 MYOZ2Q9NPC6 264 aa18.47■□□□□ 0.55
VAC14-208ENST00000566655 PI4KBQ9UBF8 816 aa18.47■□□□□ 0.55
VAC14-208ENST00000566655 CLRN2A0PK11 232 aa18.46■□□□□ 0.55
VAC14-208ENST00000566655 WNT10BO00744 389 aa18.46■□□□□ 0.55
VAC14-208ENST00000566655 CPLX1O14810 134 aa18.46■□□□□ 0.55
VAC14-208ENST00000566655 EGFRP00533 1210 aa18.46■□□□□ 0.55
VAC14-208ENST00000566655 AKR1B1P15121 316 aa18.46■□□□□ 0.55
VAC14-208ENST00000566655 LMNB1P20700 586 aa18.46■□□□□ 0.55
VAC14-208ENST00000566655 EIF6P56537 245 aaKnown RBP18.46■□□□□ 0.55
VAC14-208ENST00000566655 PPP2R5BQ15173 497 aa18.46■□□□□ 0.55
VAC14-208ENST00000566655 CATIPQ7Z7H3 387 aa18.46■□□□□ 0.55
VAC14-208ENST00000566655 FAM184AQ8NB25 1140 aa18.46■□□□□ 0.55
VAC14-208ENST00000566655 ORC3Q9UBD5 711 aaPredicted RBP18.46■□□□□ 0.55
VAC14-208ENST00000566655 STK36Q9NRP7 1315 aa18.46■□□□□ 0.55
VAC14-208ENST00000566655 FMNL1O95466 1100 aaPredicted RBP18.45■□□□□ 0.54
VAC14-208ENST00000566655 CALM1P0DP23 149 aa18.45■□□□□ 0.54
VAC14-208ENST00000566655 CALM2P0DP24 149 aa18.45■□□□□ 0.54
VAC14-208ENST00000566655 CALM3P0DP25 149 aa18.45■□□□□ 0.54
VAC14-208ENST00000566655 NBPF9Q3BBW0 867 aa18.45■□□□□ 0.54
VAC14-208ENST00000566655 TATDN1Q6P1N9 297 aa18.45■□□□□ 0.54
VAC14-208ENST00000566655 FOXP4Q8IVH2 680 aaPredicted RBP18.45■□□□□ 0.54
VAC14-208ENST00000566655 RGS22Q8NE09 1264 aa18.45■□□□□ 0.54
VAC14-208ENST00000566655 FAM151AQ8WW52 585 aa18.45■□□□□ 0.54
VAC14-208ENST00000566655 MAP3K14Q99558 947 aa18.45■□□□□ 0.54
VAC14-208ENST00000566655 TMEM47Q9BQJ4 181 aa18.45■□□□□ 0.54
VAC14-208ENST00000566655 SIPA1L1O43166 1804 aa18.45■□□□□ 0.54
VAC14-208ENST00000566655 ECM29Q5VYK3 1845 aa18.45■□□□□ 0.54
VAC14-208ENST00000566655 VPS37CA5D8V6 355 aaPredicted RBP18.44■□□□□ 0.54
VAC14-208ENST00000566655 TCP10L2B9ZVM9 353 aa18.44■□□□□ 0.54
VAC14-208ENST00000566655 CDKL5O76039 1030 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms