RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 BRD1O95696 1058 aa20.72■□□□□ 0.91
HERC2-208ENST00000566635 GMPSP49915 693 aaPredicted RBP20.72■□□□□ 0.91
HERC2-208ENST00000566635 IFIT1BQ5T764 474 aaKnown RBP20.72■□□□□ 0.91
HERC2-208ENST00000566635 SH3BP5LQ7L8J4 393 aa20.72■□□□□ 0.91
HERC2-208ENST00000566635 ZNF654Q8IZM8 581 aa20.72■□□□□ 0.91
HERC2-208ENST00000566635 ZNF444Q8N0Y2 327 aaPredicted RBP20.72■□□□□ 0.91
HERC2-208ENST00000566635 LLPHQ9BRT6 129 aaKnown RBP20.72■□□□□ 0.91
HERC2-208ENST00000566635 IL17RBQ9NRM6 502 aa20.72■□□□□ 0.91
HERC2-208ENST00000566635 TSPY3P0CV98 308 aa20.71■□□□□ 0.91
HERC2-208ENST00000566635 TSPY8P0CW00 308 aa20.71■□□□□ 0.91
HERC2-208ENST00000566635 LMNB1P20700 586 aa20.71■□□□□ 0.91
HERC2-208ENST00000566635 CDC27P30260 824 aa20.71■□□□□ 0.91
HERC2-208ENST00000566635 NBR1Q14596 966 aa20.71■□□□□ 0.91
HERC2-208ENST00000566635 MYOZ2Q9NPC6 264 aa20.71■□□□□ 0.91
HERC2-208ENST00000566635 ZNF70Q9UC06 446 aaPredicted RBP20.71■□□□□ 0.91
HERC2-208ENST00000566635 SERPINB13Q9UIV8 391 aa20.71■□□□□ 0.91
HERC2-208ENST00000566635 HLA-DOAP06340 250 aa20.71■□□□□ 0.91
HERC2-208ENST00000566635 MTMR14Q8NCE2 650 aa20.71■□□□□ 0.91
HERC2-208ENST00000566635 ZNF287Q9HBT7 754 aa20.71■□□□□ 0.91
HERC2-208ENST00000566635 NID2Q14112 1375 aa20.7■□□□□ 0.9
HERC2-208ENST00000566635 TCP10L2B9ZVM9 353 aa20.7■□□□□ 0.9
HERC2-208ENST00000566635 STX6O43752 255 aa20.7■□□□□ 0.9
HERC2-208ENST00000566635 NPM3O75607 178 aaKnown RBP20.7■□□□□ 0.9
HERC2-208ENST00000566635 RPS12P25398 132 aaKnown RBP20.7■□□□□ 0.9
HERC2-208ENST00000566635 ADD1P35611 737 aaKnown RBP20.7■□□□□ 0.9
HERC2-208ENST00000566635 SPDYE2Q495Y8 402 aa20.7■□□□□ 0.9
HERC2-208ENST00000566635 TMTC2Q8N394 836 aa20.7■□□□□ 0.9
HERC2-208ENST00000566635 ZBED3Q96IU2 234 aaPredicted RBP20.7■□□□□ 0.9
HERC2-208ENST00000566635 EGFRP00533 1210 aa20.69■□□□□ 0.9
HERC2-208ENST00000566635 RCSD1Q6JBY9 416 aa20.69■□□□□ 0.9
HERC2-208ENST00000566635 SYNE3Q6ZMZ3 975 aa20.69■□□□□ 0.9
HERC2-208ENST00000566635 ZSCAN29Q8IWY8 852 aaPredicted RBP20.69■□□□□ 0.9
HERC2-208ENST00000566635 FAM217BQ9NTX9 383 aaPredicted RBP20.69■□□□□ 0.9
HERC2-208ENST00000566635 TMOD2Q9NZR1 351 aa20.69■□□□□ 0.9
HERC2-208ENST00000566635 FAM196BA6NMK8 535 aa20.69■□□□□ 0.9
HERC2-208ENST00000566635 ENTPD3O75355 529 aa20.69■□□□□ 0.9
HERC2-208ENST00000566635 ZNF280AP59817 542 aaPredicted RBP20.69■□□□□ 0.9
HERC2-208ENST00000566635 NBPF9Q3BBW0 867 aa20.69■□□□□ 0.9
HERC2-208ENST00000566635 NUP133Q8WUM0 1156 aa20.69■□□□□ 0.9
HERC2-208ENST00000566635 DHX36Q9H2U1 1008 aaKnown RBP20.69■□□□□ 0.9
HERC2-208ENST00000566635 DNAJC18Q9H819 358 aa20.69■□□□□ 0.9
HERC2-208ENST00000566635 VEZTQ9HBM0 779 aa20.69■□□□□ 0.9
HERC2-208ENST00000566635 WNT10BO00744 389 aa20.68■□□□□ 0.9
HERC2-208ENST00000566635 CPLX1O14810 134 aa20.68■□□□□ 0.9
HERC2-208ENST00000566635 SHMT1P34896 483 aa20.68■□□□□ 0.9
HERC2-208ENST00000566635 NT5C2P49902 561 aa20.68■□□□□ 0.9
HERC2-208ENST00000566635 MICALL2Q8IY33 904 aa20.68■□□□□ 0.9
HERC2-208ENST00000566635 EHD4Q9H223 541 aa20.68■□□□□ 0.9
HERC2-208ENST00000566635 WDR33Q9C0J8 1336 aaKnown RBP20.68■□□□□ 0.9
HERC2-208ENST00000566635 ATRNL1Q5VV63 1379 aa20.68■□□□□ 0.9
HERC2-208ENST00000566635 DHX16O60231 1041 aaKnown RBP20.68■□□□□ 0.9
HERC2-208ENST00000566635 LARP1BQ659C4 914 aaKnown RBP20.68■□□□□ 0.9
HERC2-208ENST00000566635 SWAP70Q9UH65 585 aa20.68■□□□□ 0.9
HERC2-208ENST00000566635 MTMR6Q9Y217 621 aa20.68■□□□□ 0.9
HERC2-208ENST00000566635 CNTNAP1P78357 1384 aa20.67■□□□□ 0.9
HERC2-208ENST00000566635 COL2A1P02458 1487 aaPredicted RBP20.67■□□□□ 0.9
HERC2-208ENST00000566635 VPS37CA5D8V6 355 aaPredicted RBP20.67■□□□□ 0.9
HERC2-208ENST00000566635 FDPSP14324 419 aaKnown RBP20.67■□□□□ 0.9
HERC2-208ENST00000566635 HMGN5P82970 282 aaKnown RBP20.67■□□□□ 0.9
HERC2-208ENST00000566635 RTN1Q16799 776 aa20.67■□□□□ 0.9
HERC2-208ENST00000566635 RBM26Q5T8P6 1007 aaKnown RBP20.67■□□□□ 0.9
HERC2-208ENST00000566635 FAM184AQ8NB25 1140 aa20.67■□□□□ 0.9
HERC2-208ENST00000566635 CHAMP1Q96JM3 812 aa20.67■□□□□ 0.9
HERC2-208ENST00000566635 AKR1B1P15121 316 aa20.66■□□□□ 0.9
HERC2-208ENST00000566635 FOSBP53539 338 aa20.66■□□□□ 0.9
HERC2-208ENST00000566635 CRACR2BQ8N4Y2 399 aaPredicted RBP20.66■□□□□ 0.9
HERC2-208ENST00000566635 NEDD1Q8NHV4 660 aa20.66■□□□□ 0.9
HERC2-208ENST00000566635 TCP11L1Q9NUJ3 509 aa20.66■□□□□ 0.9
HERC2-208ENST00000566635 GREB1LQ9C091 1923 aaPredicted RBP20.66■□□□□ 0.9
HERC2-208ENST00000566635 NTRK3Q16288 839 aa20.66■□□□□ 0.9
HERC2-208ENST00000566635 CDC37L1Q7L3B6 337 aa20.66■□□□□ 0.9
HERC2-208ENST00000566635 SAMD7Q7Z3H4 446 aa20.66■□□□□ 0.9
HERC2-208ENST00000566635 CATIPQ7Z7H3 387 aa20.66■□□□□ 0.9
HERC2-208ENST00000566635 DPF2Q92785 391 aa20.66■□□□□ 0.9
HERC2-208ENST00000566635 CHMP4CQ96CF2 233 aa20.66■□□□□ 0.9
HERC2-208ENST00000566635 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.66■□□□□ 0.9
HERC2-208ENST00000566635 PI4KBQ9UBF8 816 aa20.66■□□□□ 0.9
HERC2-208ENST00000566635 CNOT7Q9UIV1 285 aaKnown RBP20.66■□□□□ 0.9
HERC2-208ENST00000566635 PLIN4Q96Q06 1357 aa20.66■□□□□ 0.9
HERC2-208ENST00000566635 ZSCAN22P10073 491 aaPredicted RBP20.65■□□□□ 0.9
HERC2-208ENST00000566635 TROAPQ12815 778 aa20.65■□□□□ 0.9
HERC2-208ENST00000566635 PHKBQ93100 1093 aa20.65■□□□□ 0.9
HERC2-208ENST00000566635 PDCP20941 246 aa20.65■□□□□ 0.9
HERC2-208ENST00000566635 RCAN1P53805 252 aa20.65■□□□□ 0.9
HERC2-208ENST00000566635 TBC1D10BQ4KMP7 808 aaPredicted RBP20.65■□□□□ 0.9
HERC2-208ENST00000566635 DGKHQ86XP1 1220 aa20.65■□□□□ 0.9
HERC2-208ENST00000566635 FANCBQ8NB91 859 aa20.65■□□□□ 0.9
HERC2-208ENST00000566635 CSRNP1Q96S65 589 aa20.65■□□□□ 0.9
HERC2-208ENST00000566635 RNF181Q9P0P0 153 aa20.65■□□□□ 0.9
HERC2-208ENST00000566635 STX8Q9UNK0 236 aa20.65■□□□□ 0.9
HERC2-208ENST00000566635 SCAF8Q9UPN6 1271 aaKnown RBP20.65■□□□□ 0.9
HERC2-208ENST00000566635 MYO1BO43795 1136 aa20.64■□□□□ 0.89
HERC2-208ENST00000566635 BAG4O95429 457 aaKnown RBP20.64■□□□□ 0.89
HERC2-208ENST00000566635 CLEC10AQ8IUN9 316 aa20.64■□□□□ 0.89
HERC2-208ENST00000566635 CDAN1Q8IWY9 1227 aa20.64■□□□□ 0.89
HERC2-208ENST00000566635 CMTR1Q8N1G2 835 aaKnown RBP20.64■□□□□ 0.89
HERC2-208ENST00000566635 CEP95Q96GE4 821 aa20.64■□□□□ 0.89
HERC2-208ENST00000566635 KAT14Q9H8E8 782 aa20.64■□□□□ 0.89
HERC2-208ENST00000566635 ORC3Q9UBD5 711 aaPredicted RBP20.64■□□□□ 0.89
HERC2-208ENST00000566635 ASTN2O75129 1339 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms