RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 FOXP1Q9H334 677 aaPredicted RBP21.55■■□□□ 1.04
MSLN-207ENST00000566549 V9GY48 417 aaPredicted RBP21.55■■□□□ 1.04
MSLN-207ENST00000566549 CUTAO60888 179 aa21.55■■□□□ 1.04
MSLN-207ENST00000566549 NLRP12P59046 1061 aa21.55■■□□□ 1.04
MSLN-207ENST00000566549 MRFAP1L1Q96HT8 127 aa21.55■■□□□ 1.04
MSLN-207ENST00000566549 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.55■■□□□ 1.04
MSLN-207ENST00000566549 LRRC4BQ9NT99 713 aa21.55■■□□□ 1.04
MSLN-207ENST00000566549 KCNH3Q9ULD8 1083 aa21.55■■□□□ 1.04
MSLN-207ENST00000566549 RCAN1P53805 252 aa21.54■■□□□ 1.04
MSLN-207ENST00000566549 RNF26Q9BY78 433 aaPredicted RBP21.54■■□□□ 1.04
MSLN-207ENST00000566549 CDC25BP30305 580 aa21.54■■□□□ 1.04
MSLN-207ENST00000566549 RBM10P98175 930 aaKnown RBP21.54■■□□□ 1.04
MSLN-207ENST00000566549 GJD4Q96KN9 370 aaPredicted RBP21.54■■□□□ 1.04
MSLN-207ENST00000566549 MCM9Q9NXL9 1143 aa21.54■■□□□ 1.04
MSLN-207ENST00000566549 FOXN1O15353 648 aa21.53■■□□□ 1.04
MSLN-207ENST00000566549 USP17L8P0C7I0 530 aa21.53■■□□□ 1.04
MSLN-207ENST00000566549 TROAPQ12815 778 aa21.53■■□□□ 1.04
MSLN-207ENST00000566549 PKN1Q16512 942 aa21.53■■□□□ 1.04
MSLN-207ENST00000566549 RILPL1Q5EBL4 403 aa21.53■■□□□ 1.04
MSLN-207ENST00000566549 CNNM3Q8NE01 707 aa21.53■■□□□ 1.04
MSLN-207ENST00000566549 RBM6P78332 1123 aaKnown RBP21.53■■□□□ 1.04
MSLN-207ENST00000566549 GRAPQ13588 217 aa21.53■■□□□ 1.04
MSLN-207ENST00000566549 GRAPLQ8TC17 118 aaPredicted RBP21.53■■□□□ 1.04
MSLN-207ENST00000566549 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.53■■□□□ 1.04
MSLN-207ENST00000566549 SMC2O95347 1197 aa21.52■■□□□ 1.04
MSLN-207ENST00000566549 DIXDC1Q155Q3 683 aa21.52■■□□□ 1.04
MSLN-207ENST00000566549 GRIK5Q16478 980 aa21.52■■□□□ 1.04
MSLN-207ENST00000566549 EARS2Q5JPH6 523 aaKnown RBP21.52■■□□□ 1.04
MSLN-207ENST00000566549 METTL16Q86W50 562 aaKnown RBP21.52■■□□□ 1.04
MSLN-207ENST00000566549 TIGD1Q96MW7 591 aa21.52■■□□□ 1.04
MSLN-207ENST00000566549 TNRC6CQ9HCJ0 1690 aaKnown RBP21.52■■□□□ 1.04
MSLN-207ENST00000566549 FGRP09769 529 aa21.51■■□□□ 1.03
MSLN-207ENST00000566549 FUT2Q10981 343 aa21.51■■□□□ 1.03
MSLN-207ENST00000566549 ATP8A2Q9NTI2 1148 aa21.51■■□□□ 1.03
MSLN-207ENST00000566549 IRS2Q9Y4H2 1338 aa21.51■■□□□ 1.03
MSLN-207ENST00000566549 COL24A1Q17RW2 1714 aa21.51■■□□□ 1.03
MSLN-207ENST00000566549 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.51■■□□□ 1.03
MSLN-207ENST00000566549 TSPY2A6NKD2 308 aa21.51■■□□□ 1.03
MSLN-207ENST00000566549 PDILTQ8N807 584 aa21.51■■□□□ 1.03
MSLN-207ENST00000566549 FBXO2Q9UK22 296 aaPredicted RBP21.51■■□□□ 1.03
MSLN-207ENST00000566549 PDS5AQ29RF7 1337 aaKnown RBP21.51■■□□□ 1.03
MSLN-207ENST00000566549 KRBA2Q6ZNG9 492 aa21.5■■□□□ 1.03
MSLN-207ENST00000566549 ARPP21Q9UBL0 812 aaPredicted RBP21.5■■□□□ 1.03
MSLN-207ENST00000566549 NHSQ6T4R5 1651 aa21.5■■□□□ 1.03
MSLN-207ENST00000566549 LDHBP07195 334 aaKnown RBP21.5■■□□□ 1.03
MSLN-207ENST00000566549 XBP1P17861 261 aa21.5■■□□□ 1.03
MSLN-207ENST00000566549 LMOD1P29536 600 aaPredicted RBP21.5■■□□□ 1.03
MSLN-207ENST00000566549 IFNKQ9P0W0 207 aa21.5■■□□□ 1.03
MSLN-207ENST00000566549 MYH2Q9UKX2 1941 aa21.5■■□□□ 1.03
MSLN-207ENST00000566549 FAM237AA0A1B0GTK4 181 aa21.49■■□□□ 1.03
MSLN-207ENST00000566549 USP5P45974 858 aa21.49■■□□□ 1.03
MSLN-207ENST00000566549 NOM1Q5C9Z4 860 aaKnown RBP21.49■■□□□ 1.03
MSLN-207ENST00000566549 PRR5LQ6MZQ0 368 aa21.49■■□□□ 1.03
MSLN-207ENST00000566549 FOXP4Q8IVH2 680 aaPredicted RBP21.49■■□□□ 1.03
MSLN-207ENST00000566549 LRRC8AQ8IWT6 810 aa21.49■■□□□ 1.03
MSLN-207ENST00000566549 SEPT12Q8IYM1 358 aa21.49■■□□□ 1.03
MSLN-207ENST00000566549 DYNLL2Q96FJ2 89 aa21.49■■□□□ 1.03
MSLN-207ENST00000566549 BPIFA3Q9BQP9 254 aa21.49■■□□□ 1.03
MSLN-207ENST00000566549 TUBE1Q9UJT0 475 aa21.49■■□□□ 1.03
MSLN-207ENST00000566549 POLR2DO15514 142 aaKnown RBP21.49■■□□□ 1.03
MSLN-207ENST00000566549 PRPF3O43395 683 aaKnown RBP21.49■■□□□ 1.03
MSLN-207ENST00000566549 PTPREP23469 700 aa21.49■■□□□ 1.03
MSLN-207ENST00000566549 NCAPHQ15003 741 aa21.49■■□□□ 1.03
MSLN-207ENST00000566549 PPP2R5BQ15173 497 aa21.49■■□□□ 1.03
MSLN-207ENST00000566549 TMTC3Q6ZXV5 915 aa21.49■■□□□ 1.03
MSLN-207ENST00000566549 SRBD1Q8N5C6 995 aaKnown RBP21.49■■□□□ 1.03
MSLN-207ENST00000566549 CTCFLQ8NI51 663 aaPredicted RBP21.49■■□□□ 1.03
MSLN-207ENST00000566549 SH3RF3Q8TEJ3 882 aaPredicted RBP21.49■■□□□ 1.03
MSLN-207ENST00000566549 XPO4Q9C0E2 1151 aaKnown RBP21.49■■□□□ 1.03
MSLN-207ENST00000566549 RBM28Q9NW13 759 aaKnown RBP21.49■■□□□ 1.03
MSLN-207ENST00000566549 FAM13BQ9NYF5 915 aa21.49■■□□□ 1.03
MSLN-207ENST00000566549 THSD7AQ9UPZ6 1657 aa21.49■■□□□ 1.03
MSLN-207ENST00000566549 SPATA31A6Q5VVP1 1343 aa21.49■■□□□ 1.03
MSLN-207ENST00000566549 ORC4O43929 436 aa21.48■■□□□ 1.03
MSLN-207ENST00000566549 PCP11498 1178 aaKnown RBP21.48■■□□□ 1.03
MSLN-207ENST00000566549 KRT2P35908 639 aa21.48■■□□□ 1.03
MSLN-207ENST00000566549 PDE4BQ07343 736 aa21.48■■□□□ 1.03
MSLN-207ENST00000566549 SPTY2D1Q68D10 685 aaPredicted RBP21.48■■□□□ 1.03
MSLN-207ENST00000566549 USP49Q70CQ1 688 aa21.48■■□□□ 1.03
MSLN-207ENST00000566549 GRAMD1CQ8IYS0 662 aa21.48■■□□□ 1.03
MSLN-207ENST00000566549 C16orf45Q96MC5 204 aaPredicted RBP21.48■■□□□ 1.03
MSLN-207ENST00000566549 PHF20Q9BVI0 1012 aa21.48■■□□□ 1.03
MSLN-207ENST00000566549 PCDHA5Q9Y5H7 936 aa21.48■■□□□ 1.03
MSLN-207ENST00000566549 TSC1Q92574 1164 aa21.48■■□□□ 1.03
MSLN-207ENST00000566549 RPGRQ92834 1020 aaKnown RBP21.48■■□□□ 1.03
MSLN-207ENST00000566549 AFF2P51816 1311 aa21.48■■□□□ 1.03
MSLN-207ENST00000566549 MYH13Q9UKX3 1938 aa21.48■■□□□ 1.03
MSLN-207ENST00000566549 WNT7AO00755 349 aa21.47■■□□□ 1.03
MSLN-207ENST00000566549 DDAH1O94760 285 aa21.47■■□□□ 1.03
MSLN-207ENST00000566549 CALM1P0DP23 149 aa21.47■■□□□ 1.03
MSLN-207ENST00000566549 CALM2P0DP24 149 aa21.47■■□□□ 1.03
MSLN-207ENST00000566549 CALM3P0DP25 149 aa21.47■■□□□ 1.03
MSLN-207ENST00000566549 ATP1A3P13637 1013 aa21.47■■□□□ 1.03
MSLN-207ENST00000566549 CSRNP2Q9H175 543 aa21.47■■□□□ 1.03
MSLN-207ENST00000566549 MTMR7Q9Y216 660 aa21.47■■□□□ 1.03
MSLN-207ENST00000566549 XDHP47989 1333 aa21.47■■□□□ 1.03
MSLN-207ENST00000566549 GPSM2P81274 684 aa21.47■■□□□ 1.03
MSLN-207ENST00000566549 SERTAD1Q9UHV2 236 aa21.47■■□□□ 1.03
MSLN-207ENST00000566549 VEGFAP15692 232 aaPredicted RBP21.46■■□□□ 1.03
MSLN-207ENST00000566549 LEMD3Q9Y2U8 911 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms