RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 FAM110CQ1W6H9 321 aa14.56□□□□□ -0.08
UBR1-206ENST00000566493 HSP90AB4PQ58FF6 505 aa14.56□□□□□ -0.08
UBR1-206ENST00000566493 CERS3Q8IU89 383 aa14.56□□□□□ -0.08
UBR1-206ENST00000566493 PANK1Q8TE04 598 aa14.56□□□□□ -0.08
UBR1-206ENST00000566493 TLR7Q9NYK1 1049 aaKnown RBP14.56□□□□□ -0.08
UBR1-206ENST00000566493 TMOD4Q9NZQ9 345 aa14.56□□□□□ -0.08
UBR1-206ENST00000566493 PALD1Q9ULE6 856 aa14.56□□□□□ -0.08
UBR1-206ENST00000566493 FOCADQ5VW36 1801 aa14.56□□□□□ -0.08
UBR1-206ENST00000566493 LOC285556D6RIA3 1793 aa14.55□□□□□ -0.08
UBR1-206ENST00000566493 HAX1O00165 279 aa14.55□□□□□ -0.08
UBR1-206ENST00000566493 USP5P45974 858 aa14.55□□□□□ -0.08
UBR1-206ENST00000566493 DYNLL1P63167 89 aaKnown RBP14.55□□□□□ -0.08
UBR1-206ENST00000566493 MAP3K12Q12852 859 aa14.55□□□□□ -0.08
UBR1-206ENST00000566493 IRF5Q13568 498 aa14.55□□□□□ -0.08
UBR1-206ENST00000566493 SH3D19Q5HYK7 790 aa14.55□□□□□ -0.08
UBR1-206ENST00000566493 HABP4Q5JVS0 413 aaKnown RBP14.55□□□□□ -0.08
UBR1-206ENST00000566493 AACSQ86V21 672 aa14.55□□□□□ -0.08
UBR1-206ENST00000566493 MAGEB6Q8N7X4 407 aa14.55□□□□□ -0.08
UBR1-206ENST00000566493 PXYLP1Q8TE99 480 aa14.55□□□□□ -0.08
UBR1-206ENST00000566493 WDR18Q9BV38 432 aa14.55□□□□□ -0.08
UBR1-206ENST00000566493 GINM1Q9NU53 330 aa14.55□□□□□ -0.08
UBR1-206ENST00000566493 SAP30BPQ9UHR5 308 aaKnown RBP14.55□□□□□ -0.08
UBR1-206ENST00000566493 EXOC6BQ9Y2D4 811 aa14.55□□□□□ -0.08
UBR1-206ENST00000566493 ELNP15502 786 aa14.54□□□□□ -0.08
UBR1-206ENST00000566493 BACE1P56817 501 aa14.54□□□□□ -0.08
UBR1-206ENST00000566493 IRX3P78415 501 aaPredicted RBP14.54□□□□□ -0.08
UBR1-206ENST00000566493 MTMR2Q13614 643 aa14.54□□□□□ -0.08
UBR1-206ENST00000566493 TMED8Q6PL24 325 aaPredicted RBP14.54□□□□□ -0.08
UBR1-206ENST00000566493 MIGA1Q8NAN2 632 aa14.54□□□□□ -0.08
UBR1-206ENST00000566493 DPF3Q92784 378 aa14.54□□□□□ -0.08
UBR1-206ENST00000566493 SHISA4Q96DD7 197 aa14.54□□□□□ -0.08
UBR1-206ENST00000566493 UNC93B1Q9H1C4 597 aa14.54□□□□□ -0.08
UBR1-206ENST00000566493 ASCC2Q9H1I8 757 aaPredicted RBP14.54□□□□□ -0.08
UBR1-206ENST00000566493 SIPA1L1O43166 1804 aa14.54□□□□□ -0.08
UBR1-206ENST00000566493 C19orf81C9J6K1 198 aa14.53□□□□□ -0.08
UBR1-206ENST00000566493 USP17L10C9JJH3 530 aa14.53□□□□□ -0.08
UBR1-206ENST00000566493 GDF11O95390 407 aa14.53□□□□□ -0.08
UBR1-206ENST00000566493 INHAP05111 366 aa14.53□□□□□ -0.08
UBR1-206ENST00000566493 CAPN2P17655 700 aa14.53□□□□□ -0.08
UBR1-206ENST00000566493 METTL16Q86W50 562 aaKnown RBP14.53□□□□□ -0.08
UBR1-206ENST00000566493 U2AF1L4Q8WU68 220 aaKnown RBP14.53□□□□□ -0.08
UBR1-206ENST00000566493 HTATIP2Q9BUP3 242 aa14.53□□□□□ -0.08
UBR1-206ENST00000566493 MYH1P12882 1939 aa14.53□□□□□ -0.08
UBR1-206ENST00000566493 H0YGN5 161 aa14.52□□□□□ -0.09
UBR1-206ENST00000566493 SGPL1O95470 568 aa14.52□□□□□ -0.09
UBR1-206ENST00000566493 TTF1Q15361 905 aaPredicted RBP14.52□□□□□ -0.09
UBR1-206ENST00000566493 DNAJC18Q9H819 358 aa14.52□□□□□ -0.09
UBR1-206ENST00000566493 ZBTB21Q9ULJ3 1066 aa14.52□□□□□ -0.09
UBR1-206ENST00000566493 NDUFB9Q9Y6M9 179 aa14.52□□□□□ -0.09
UBR1-206ENST00000566493 HMMRO75330 724 aa14.51□□□□□ -0.09
UBR1-206ENST00000566493 FARP2O94887 1054 aaPredicted RBP14.51□□□□□ -0.09
UBR1-206ENST00000566493 TFRCP02786 760 aaKnown RBP14.51□□□□□ -0.09
UBR1-206ENST00000566493 HOXA7P31268 230 aaPredicted RBP14.51□□□□□ -0.09
UBR1-206ENST00000566493 TTC6Q86TZ1 520 aa14.51□□□□□ -0.09
UBR1-206ENST00000566493 RPAP2Q8IXW5 612 aaPredicted RBP14.51□□□□□ -0.09
UBR1-206ENST00000566493 CLASRPQ8N2M8 674 aaKnown RBP14.51□□□□□ -0.09
UBR1-206ENST00000566493 RHPN1Q8TCX5 695 aa14.51□□□□□ -0.09
UBR1-206ENST00000566493 CHMP4BQ9H444 224 aaKnown RBP14.51□□□□□ -0.09
UBR1-206ENST00000566493 ANTXR1Q9H6X2 564 aa14.51□□□□□ -0.09
UBR1-206ENST00000566493 IL1RAPL2Q9NP60 686 aa14.51□□□□□ -0.09
UBR1-206ENST00000566493 DDX19BQ9UMR2 479 aa14.51□□□□□ -0.09
UBR1-206ENST00000566493 DOCK3Q8IZD9 2030 aa14.51□□□□□ -0.09
UBR1-206ENST00000566493 APBB1O00213 710 aa14.5□□□□□ -0.09
UBR1-206ENST00000566493 IFIT2P09913 472 aaKnown RBP14.5□□□□□ -0.09
UBR1-206ENST00000566493 JAG1P78504 1218 aa14.5□□□□□ -0.09
UBR1-206ENST00000566493 USP17L2Q6R6M4 530 aa14.5□□□□□ -0.09
UBR1-206ENST00000566493 CCAR1Q8IX12 1150 aaKnown RBP14.5□□□□□ -0.09
UBR1-206ENST00000566493 GPRC5AQ8NFJ5 357 aa14.5□□□□□ -0.09
UBR1-206ENST00000566493 KIF1BPQ96EK5 621 aa14.5□□□□□ -0.09
UBR1-206ENST00000566493 DEFB118Q96PH6 123 aa14.5□□□□□ -0.09
UBR1-206ENST00000566493 P2RX7Q99572 595 aaKnown RBP14.5□□□□□ -0.09
UBR1-206ENST00000566493 BCL11AQ9H165 835 aa14.5□□□□□ -0.09
UBR1-206ENST00000566493 MORF4L1Q9UBU8 362 aa14.5□□□□□ -0.09
UBR1-206ENST00000566493 SERPINB13Q9UIV8 391 aa14.5□□□□□ -0.09
UBR1-206ENST00000566493 COLQQ9Y215 455 aaPredicted RBP14.5□□□□□ -0.09
UBR1-206ENST00000566493 MAGEB6P1A0A0J9YX57 407 aa14.49□□□□□ -0.09
UBR1-206ENST00000566493 GH2P01242 217 aa14.49□□□□□ -0.09
UBR1-206ENST00000566493 HERVK_113P62684 666 aa14.49□□□□□ -0.09
UBR1-206ENST00000566493 SHROOM1Q2M3G4 852 aaPredicted RBP14.49□□□□□ -0.09
UBR1-206ENST00000566493 GTF3C2Q8WUA4 911 aaPredicted RBP14.49□□□□□ -0.09
UBR1-206ENST00000566493 FEZ1Q99689 392 aa14.49□□□□□ -0.09
UBR1-206ENST00000566493 EHD4Q9H223 541 aa14.49□□□□□ -0.09
UBR1-206ENST00000566493 NR2E3Q9Y5X4 410 aa14.49□□□□□ -0.09
UBR1-206ENST00000566493 HMGCRP04035 888 aa14.48□□□□□ -0.09
UBR1-206ENST00000566493 POLR3DP05423 398 aaPredicted RBP14.48□□□□□ -0.09
UBR1-206ENST00000566493 RAB3GAP1Q15042 981 aa14.48□□□□□ -0.09
UBR1-206ENST00000566493 CERKLQ49MI3 558 aaPredicted RBP14.48□□□□□ -0.09
UBR1-206ENST00000566493 SLC9C2Q5TAH2 1124 aa14.48□□□□□ -0.09
UBR1-206ENST00000566493 TATDN1Q6P1N9 297 aa14.48□□□□□ -0.09
UBR1-206ENST00000566493 UBE2Q1Q7Z7E8 422 aa14.48□□□□□ -0.09
UBR1-206ENST00000566493 CRNKL1Q9BZJ0 848 aaKnown RBP14.48□□□□□ -0.09
UBR1-206ENST00000566493 CWC22Q9HCG8 908 aaKnown RBP14.48□□□□□ -0.09
UBR1-206ENST00000566493 CABP5Q9NP86 173 aa14.48□□□□□ -0.09
UBR1-206ENST00000566493 PAK6Q9NQU5 681 aaPredicted RBP14.48□□□□□ -0.09
UBR1-206ENST00000566493 GJD2Q9UKL4 321 aa14.48□□□□□ -0.09
UBR1-206ENST00000566493 COG6Q9Y2V7 657 aa14.48□□□□□ -0.09
UBR1-206ENST00000566493 RAB11FIP3O75154 756 aa14.47□□□□□ -0.09
UBR1-206ENST00000566493 MAPK4P31152 587 aa14.47□□□□□ -0.09
UBR1-206ENST00000566493 USP14P54578 494 aa14.47□□□□□ -0.09
UBR1-206ENST00000566493 PDE3AQ14432 1141 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms