RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 TTC6Q86TZ1 520 aa24.48■■□□□ 1.51
CLN6-207ENST00000566347 ANKRD13CQ8N6S4 541 aa24.48■■□□□ 1.51
CLN6-207ENST00000566347 RIOK1Q9BRS2 568 aaKnown RBP24.48■■□□□ 1.51
CLN6-207ENST00000566347 EHD4Q9H223 541 aa24.48■■□□□ 1.51
CLN6-207ENST00000566347 TMOD4Q9NZQ9 345 aa24.48■■□□□ 1.51
CLN6-207ENST00000566347 ZBTB21Q9ULJ3 1066 aa24.48■■□□□ 1.51
CLN6-207ENST00000566347 MAGEB6P1A0A0J9YX57 407 aa24.47■■□□□ 1.51
CLN6-207ENST00000566347 C19orf81C9J6K1 198 aa24.47■■□□□ 1.51
CLN6-207ENST00000566347 GOLIM4O00461 696 aa24.47■■□□□ 1.51
CLN6-207ENST00000566347 TNPO2O14787 897 aaKnown RBP24.47■■□□□ 1.51
CLN6-207ENST00000566347 GDF11O95390 407 aa24.47■■□□□ 1.51
CLN6-207ENST00000566347 PDE6AP16499 860 aa24.47■■□□□ 1.51
CLN6-207ENST00000566347 C20orf194Q5TEA3 1177 aa24.47■■□□□ 1.51
CLN6-207ENST00000566347 SLAIN1Q8ND83 568 aa24.47■■□□□ 1.51
CLN6-207ENST00000566347 DNAJC2Q99543 621 aaKnown RBP24.47■■□□□ 1.51
CLN6-207ENST00000566347 SERPINB13Q9UIV8 391 aa24.47■■□□□ 1.51
CLN6-207ENST00000566347 USP17L10C9JJH3 530 aa24.46■■□□□ 1.51
CLN6-207ENST00000566347 JAG1P78504 1218 aa24.46■■□□□ 1.51
CLN6-207ENST00000566347 BCL11AQ9H165 835 aa24.46■■□□□ 1.51
CLN6-207ENST00000566347 ASCC2Q9H1I8 757 aaPredicted RBP24.46■■□□□ 1.51
CLN6-207ENST00000566347 UBXN2AP68543 259 aa24.45■■□□□ 1.5
CLN6-207ENST00000566347 TATDN1Q6P1N9 297 aa24.45■■□□□ 1.5
CLN6-207ENST00000566347 COA7Q96BR5 231 aa24.45■■□□□ 1.5
CLN6-207ENST00000566347 CRNKL1Q9BZJ0 848 aaKnown RBP24.45■■□□□ 1.5
CLN6-207ENST00000566347 BIN2Q9UBW5 565 aaPredicted RBP24.45■■□□□ 1.5
CLN6-207ENST00000566347 GABRQQ9UN88 632 aa24.45■■□□□ 1.5
CLN6-207ENST00000566347 ZNF532Q9HCE3 1301 aa24.44■■□□□ 1.5
CLN6-207ENST00000566347 ATP5JP18859 108 aa24.44■■□□□ 1.5
CLN6-207ENST00000566347 IRX3P78415 501 aaPredicted RBP24.44■■□□□ 1.5
CLN6-207ENST00000566347 GH2P01242 217 aa24.43■■□□□ 1.5
CLN6-207ENST00000566347 HOXA7P31268 230 aaPredicted RBP24.43■■□□□ 1.5
CLN6-207ENST00000566347 FLT3LGP49771 235 aa24.43■■□□□ 1.5
CLN6-207ENST00000566347 IRF5Q13568 498 aa24.43■■□□□ 1.5
CLN6-207ENST00000566347 MTFR1Q15390 333 aa24.43■■□□□ 1.5
CLN6-207ENST00000566347 SHROOM1Q2M3G4 852 aaPredicted RBP24.43■■□□□ 1.5
CLN6-207ENST00000566347 NKX2-3Q8TAU0 364 aa24.43■■□□□ 1.5
CLN6-207ENST00000566347 LRRCC1Q9C099 1032 aa24.43■■□□□ 1.5
CLN6-207ENST00000566347 PAG1Q9NWQ8 432 aa24.43■■□□□ 1.5
CLN6-207ENST00000566347 NAV1Q8NEY1 1877 aa24.43■■□□□ 1.5
CLN6-207ENST00000566347 DDX60LQ5H9U9 1706 aaKnown RBP24.42■■□□□ 1.5
CLN6-207ENST00000566347 ADCY3O60266 1144 aa24.42■■□□□ 1.5
CLN6-207ENST00000566347 PXYLP1Q8TE99 480 aa24.42■■□□□ 1.5
CLN6-207ENST00000566347 BOLA2Q9H3K6 86 aa24.42■■□□□ 1.5
CLN6-207ENST00000566347 TCRBV5S4A2TA0A5A2 114 aa24.41■■□□□ 1.5
CLN6-207ENST00000566347 POLR3DP05423 398 aaPredicted RBP24.41■■□□□ 1.5
CLN6-207ENST00000566347 CERKLQ49MI3 558 aaPredicted RBP24.41■■□□□ 1.5
CLN6-207ENST00000566347 USP17L2Q6R6M4 530 aa24.41■■□□□ 1.5
CLN6-207ENST00000566347 HAUS7Q99871 368 aa24.41■■□□□ 1.5
CLN6-207ENST00000566347 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.41■■□□□ 1.5
CLN6-207ENST00000566347 CCL5P13501 91 aa24.4■■□□□ 1.5
CLN6-207ENST00000566347 EDC3Q96F86 508 aaKnown RBP24.4■■□□□ 1.5
CLN6-207ENST00000566347 MORF4L1Q9UBU8 362 aa24.4■■□□□ 1.5
CLN6-207ENST00000566347 DOCK3Q8IZD9 2030 aa24.4■■□□□ 1.5
CLN6-207ENST00000566347 GJB1P08034 283 aa24.39■■□□□ 1.49
CLN6-207ENST00000566347 PLCD1P51178 756 aa24.39■■□□□ 1.49
CLN6-207ENST00000566347 ABCB5Q2M3G0 1257 aa24.39■■□□□ 1.49
CLN6-207ENST00000566347 GTF3C2Q8WUA4 911 aaPredicted RBP24.39■■□□□ 1.49
CLN6-207ENST00000566347 RNF208Q9H0X6 261 aa24.39■■□□□ 1.49
CLN6-207ENST00000566347 CABP5Q9NP86 173 aa24.39■■□□□ 1.49
CLN6-207ENST00000566347 MCM9Q9NXL9 1143 aa24.39■■□□□ 1.49
CLN6-207ENST00000566347 SLC34A2O95436 690 aa24.38■■□□□ 1.49
CLN6-207ENST00000566347 SHMT1P34896 483 aa24.38■■□□□ 1.49
CLN6-207ENST00000566347 ADD2P35612 726 aa24.38■■□□□ 1.49
CLN6-207ENST00000566347 GJA8P48165 433 aa24.38■■□□□ 1.49
CLN6-207ENST00000566347 HERVK_113P62684 666 aa24.38■■□□□ 1.49
CLN6-207ENST00000566347 RAB3GAP1Q15042 981 aa24.38■■□□□ 1.49
CLN6-207ENST00000566347 LCORLQ8N3X6 602 aa24.38■■□□□ 1.49
CLN6-207ENST00000566347 P2RX7Q99572 595 aaKnown RBP24.38■■□□□ 1.49
CLN6-207ENST00000566347 FEZ1Q99689 392 aa24.38■■□□□ 1.49
CLN6-207ENST00000566347 EMILIN3Q9NT22 766 aa24.38■■□□□ 1.49
CLN6-207ENST00000566347 TAOK2Q9UL54 1235 aa24.38■■□□□ 1.49
CLN6-207ENST00000566347 ELNP15502 786 aa24.37■■□□□ 1.49
CLN6-207ENST00000566347 USP14P54578 494 aa24.37■■□□□ 1.49
CLN6-207ENST00000566347 GABPAQ06546 454 aa24.37■■□□□ 1.49
CLN6-207ENST00000566347 GCC1Q96CN9 775 aa24.37■■□□□ 1.49
CLN6-207ENST00000566347 C12orf42Q96LP6 360 aa24.37■■□□□ 1.49
CLN6-207ENST00000566347 DCP1AQ9NPI6 582 aaPredicted RBP24.37■■□□□ 1.49
CLN6-207ENST00000566347 INHAP05111 366 aa24.36■■□□□ 1.49
CLN6-207ENST00000566347 GPRC5AQ8NFJ5 357 aa24.36■■□□□ 1.49
CLN6-207ENST00000566347 SDR42E1Q8WUS8 393 aa24.36■■□□□ 1.49
CLN6-207ENST00000566347 SHISA4Q96DD7 197 aa24.36■■□□□ 1.49
CLN6-207ENST00000566347 MYH7P12883 1935 aa24.35■■□□□ 1.49
CLN6-207ENST00000566347 UBE3CQ15386 1083 aa24.35■■□□□ 1.49
CLN6-207ENST00000566347 ZSCAN25Q6NSZ9 544 aa24.35■■□□□ 1.49
CLN6-207ENST00000566347 KIAA1683Q9H0B3 1180 aa24.35■■□□□ 1.49
CLN6-207ENST00000566347 ARMT1Q9H993 441 aa24.35■■□□□ 1.49
CLN6-207ENST00000566347 ATP8A2Q9NTI2 1148 aa24.35■■□□□ 1.49
CLN6-207ENST00000566347 SMARCA5O60264 1052 aaPredicted RBP24.34■■□□□ 1.49
CLN6-207ENST00000566347 MBD4O95243 580 aa24.34■■□□□ 1.49
CLN6-207ENST00000566347 CAPN2P17655 700 aa24.34■■□□□ 1.49
CLN6-207ENST00000566347 UNC93B1Q9H1C4 597 aa24.34■■□□□ 1.49
CLN6-207ENST00000566347 DCTPP1Q9H773 170 aa24.34■■□□□ 1.49
CLN6-207ENST00000566347 ECHDC1Q9NTX5 307 aa24.34■■□□□ 1.49
CLN6-207ENST00000566347 USP17L15C9J2P7 530 aa24.33■■□□□ 1.49
CLN6-207ENST00000566347 USP17L13C9JLJ4 530 aa24.33■■□□□ 1.49
CLN6-207ENST00000566347 USP17L11C9JVI0 530 aa24.33■■□□□ 1.49
CLN6-207ENST00000566347 USP17L18D6R9N7 530 aa24.33■■□□□ 1.49
CLN6-207ENST00000566347 USP17L22D6RA61 530 aa24.33■■□□□ 1.49
CLN6-207ENST00000566347 USP17L17D6RBQ6 530 aa24.33■■□□□ 1.49
CLN6-207ENST00000566347 USP17L19D6RCP7 530 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms