RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 DIRC2Q96SL1 478 aa4.79□□□□□ -1.64
SMG1-212ENST00000566328 DCP1AQ9NPI6 582 aaPredicted RBP4.79□□□□□ -1.64
SMG1-212ENST00000566328 BIN2Q9UBW5 565 aaPredicted RBP4.79□□□□□ -1.64
SMG1-212ENST00000566328 PRAMEF27A3QJZ7 478 aa4.78□□□□□ -1.64
SMG1-212ENST00000566328 SOWAHDA6NJG2 315 aa4.78□□□□□ -1.64
SMG1-212ENST00000566328 TREHO43280 583 aa4.78□□□□□ -1.64
SMG1-212ENST00000566328 PAGE1O75459 146 aa4.78□□□□□ -1.64
SMG1-212ENST00000566328 KIR3DL1P43629 444 aa4.78□□□□□ -1.64
SMG1-212ENST00000566328 DSC3Q14574 896 aa4.78□□□□□ -1.64
SMG1-212ENST00000566328 CIAPIN1Q6FI81 312 aa4.78□□□□□ -1.64
SMG1-212ENST00000566328 AMIGO3Q86WK7 504 aa4.78□□□□□ -1.64
SMG1-212ENST00000566328 ABHD4Q8TB40 342 aa4.78□□□□□ -1.64
SMG1-212ENST00000566328 MIPEPQ99797 713 aa4.78□□□□□ -1.64
SMG1-212ENST00000566328 EPB41L4BQ9H329 900 aa4.78□□□□□ -1.64
SMG1-212ENST00000566328 C19orf73Q9NVV2 129 aa4.78□□□□□ -1.64
SMG1-212ENST00000566328 GTF3C3Q9Y5Q9 886 aa4.78□□□□□ -1.64
SMG1-212ENST00000566328 PRR33A8MZF0 331 aa4.77□□□□□ -1.65
SMG1-212ENST00000566328 NPIPB6E9PJ23 425 aa4.77□□□□□ -1.65
SMG1-212ENST00000566328 H3BS24 57 aa4.77□□□□□ -1.65
SMG1-212ENST00000566328 ETF1P62495 437 aaKnown RBP4.77□□□□□ -1.65
SMG1-212ENST00000566328 FGD1P98174 961 aa4.77□□□□□ -1.65
SMG1-212ENST00000566328 ALG1LQ6GMV1 187 aa4.77□□□□□ -1.65
SMG1-212ENST00000566328 LETMD1Q6P1Q0 360 aa4.77□□□□□ -1.65
SMG1-212ENST00000566328 TMPRSS7Q7RTY8 843 aa4.77□□□□□ -1.65
SMG1-212ENST00000566328 HID1Q8IV36 788 aa4.77□□□□□ -1.65
SMG1-212ENST00000566328 UBE2FQ969M7 185 aa4.77□□□□□ -1.65
SMG1-212ENST00000566328 WNT10AQ9GZT5 417 aa4.77□□□□□ -1.65
SMG1-212ENST00000566328 ST14Q9Y5Y6 855 aa4.77□□□□□ -1.65
SMG1-212ENST00000566328 SNCAIPQ9Y6H5 919 aa4.77□□□□□ -1.65
SMG1-212ENST00000566328 CAPN6Q9Y6Q1 641 aa4.77□□□□□ -1.65
SMG1-212ENST00000566328 TCAF2A6NFQ2 919 aa4.76□□□□□ -1.65
SMG1-212ENST00000566328 PRRG2O14669 202 aa4.76□□□□□ -1.65
SMG1-212ENST00000566328 FBXO24O75426 580 aa4.76□□□□□ -1.65
SMG1-212ENST00000566328 CBX7O95931 251 aa4.76□□□□□ -1.65
SMG1-212ENST00000566328 GLDCP23378 1020 aa4.76□□□□□ -1.65
SMG1-212ENST00000566328 MAPK1P28482 360 aa4.76□□□□□ -1.65
SMG1-212ENST00000566328 SLBPQ14493 270 aaKnown RBP eCLIP4.76□□□□□ -1.65
SMG1-212ENST00000566328 KCNA10Q16322 511 aa4.76□□□□□ -1.65
SMG1-212ENST00000566328 PCNX4Q63HM2 1172 aa4.76□□□□□ -1.65
SMG1-212ENST00000566328 ATG14Q6ZNE5 492 aa4.76□□□□□ -1.65
SMG1-212ENST00000566328 TTLL10Q6ZVT0 673 aa4.76□□□□□ -1.65
SMG1-212ENST00000566328 TTC6Q86TZ1 520 aa4.76□□□□□ -1.65
SMG1-212ENST00000566328 SLC26A8Q96RN1 970 aa4.76□□□□□ -1.65
SMG1-212ENST00000566328 SLAMF8Q9P0V8 285 aa4.76□□□□□ -1.65
SMG1-212ENST00000566328 ZSWIM5Q9P217 1185 aa4.76□□□□□ -1.65
SMG1-212ENST00000566328 SPG7Q9UQ90 795 aa4.76□□□□□ -1.65
SMG1-212ENST00000566328 NCANO14594 1321 aa4.75□□□□□ -1.65
SMG1-212ENST00000566328 B8ZZF3 427 aa4.75□□□□□ -1.65
SMG1-212ENST00000566328 KRT1P04264 644 aa4.75□□□□□ -1.65
SMG1-212ENST00000566328 MED14OSP0DP75 135 aa4.75□□□□□ -1.65
SMG1-212ENST00000566328 INPP5AQ14642 412 aa4.75□□□□□ -1.65
SMG1-212ENST00000566328 LRFN4Q6PJG9 635 aa4.75□□□□□ -1.65
SMG1-212ENST00000566328 PIWIL2Q8TC59 973 aaKnown RBP4.75□□□□□ -1.65
SMG1-212ENST00000566328 MYLIPQ8WY64 445 aa4.75□□□□□ -1.65
SMG1-212ENST00000566328 KCNN1Q92952 543 aa4.75□□□□□ -1.65
SMG1-212ENST00000566328 PLPPR2Q96GM1 343 aa4.75□□□□□ -1.65
SMG1-212ENST00000566328 KRTAP9-8Q9BYQ0 159 aa4.75□□□□□ -1.65
SMG1-212ENST00000566328 CD320Q9NPF0 282 aa4.75□□□□□ -1.65
SMG1-212ENST00000566328 TMEM59LQ9UK28 342 aa4.75□□□□□ -1.65
SMG1-212ENST00000566328 CST3P01034 146 aaPredicted RBP4.74□□□□□ -1.65
SMG1-212ENST00000566328 LMNB1P20700 586 aa4.74□□□□□ -1.65
SMG1-212ENST00000566328 MAPK8P45983 427 aa4.74□□□□□ -1.65
SMG1-212ENST00000566328 ATP2B2Q01814 1243 aa4.74□□□□□ -1.65
SMG1-212ENST00000566328 NKG7Q16617 165 aa4.74□□□□□ -1.65
SMG1-212ENST00000566328 SV2BQ7L1I2 683 aa4.74□□□□□ -1.65
SMG1-212ENST00000566328 ZSCAN29Q8IWY8 852 aaPredicted RBP4.74□□□□□ -1.65
SMG1-212ENST00000566328 KRTAP9-3Q9BYQ3 159 aa4.74□□□□□ -1.65
SMG1-212ENST00000566328 OSBPL7Q9BZF2 842 aa4.74□□□□□ -1.65
SMG1-212ENST00000566328 FBRSQ9HAH7 460 aa4.74□□□□□ -1.65
SMG1-212ENST00000566328 FAM8A1Q9UBU6 413 aa4.74□□□□□ -1.65
SMG1-212ENST00000566328 TACC3Q9Y6A5 838 aa4.74□□□□□ -1.65
SMG1-212ENST00000566328 SRFP11831 508 aa4.73□□□□□ -1.65
SMG1-212ENST00000566328 ETV3P41162 512 aa4.73□□□□□ -1.65
SMG1-212ENST00000566328 WIPI1Q5MNZ9 446 aaPredicted RBP4.73□□□□□ -1.65
SMG1-212ENST00000566328 RASIP1Q5U651 963 aa4.73□□□□□ -1.65
SMG1-212ENST00000566328 PRAMEF13Q5VWM6 474 aa4.73□□□□□ -1.65
SMG1-212ENST00000566328 RIN3Q8TB24 985 aa4.73□□□□□ -1.65
SMG1-212ENST00000566328 SYTL4Q96C24 671 aaPredicted RBP4.73□□□□□ -1.65
SMG1-212ENST00000566328 TRIT1Q9H3H1 467 aaKnown RBP4.73□□□□□ -1.65
SMG1-212ENST00000566328 SMG5Q9UPR3 1016 aaKnown RBP4.73□□□□□ -1.65
SMG1-212ENST00000566328 GNEQ9Y223 722 aaKnown RBP4.73□□□□□ -1.65
SMG1-212ENST00000566328 CNTNAP4Q9C0A0 1308 aa4.72□□□□□ -1.65
SMG1-212ENST00000566328 DNAJC25-GNG10A0A024R161 153 aa4.72□□□□□ -1.65
SMG1-212ENST00000566328 ETV2O00321 342 aaPredicted RBP4.72□□□□□ -1.65
SMG1-212ENST00000566328 NUAK1O60285 661 aa4.72□□□□□ -1.65
SMG1-212ENST00000566328 HPXP02790 462 aa4.72□□□□□ -1.65
SMG1-212ENST00000566328 CELA3AP09093 270 aa4.72□□□□□ -1.65
SMG1-212ENST00000566328 HK2P52789 917 aa4.72□□□□□ -1.65
SMG1-212ENST00000566328 TNK2Q07912 1038 aa4.72□□□□□ -1.65
SMG1-212ENST00000566328 RETREG2Q8NC44 543 aa4.72□□□□□ -1.65
SMG1-212ENST00000566328 FRMD6Q96NE9 622 aa4.72□□□□□ -1.65
SMG1-212ENST00000566328 ESR1P03372 595 aa4.71□□□□□ -1.66
SMG1-212ENST00000566328 INHBBP09529 407 aa4.71□□□□□ -1.66
SMG1-212ENST00000566328 GRK4P32298 578 aa4.71□□□□□ -1.66
SMG1-212ENST00000566328 CTSWP56202 376 aa4.71□□□□□ -1.66
SMG1-212ENST00000566328 LINC00310P59036 64 aa4.71□□□□□ -1.66
SMG1-212ENST00000566328 RPS26P62854 115 aaKnown RBP4.71□□□□□ -1.66
SMG1-212ENST00000566328 PTPN11Q06124 597 aaPredicted RBP4.71□□□□□ -1.66
SMG1-212ENST00000566328 RALGPS1Q5JS13 557 aa4.71□□□□□ -1.66
SMG1-212ENST00000566328 DIEXFQ68CQ4 756 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms