RNA–Protein interactions for RNA: ENST00000566247.1

TRADD-205, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-205ENST00000566247 SEC62Q99442 399 aaKnown RBP21.7■■□□□ 1.06
TRADD-205ENST00000566247 ZFYVE28Q9HCC9 887 aa21.7■■□□□ 1.06
TRADD-205ENST00000566247 ARPP21Q9UBL0 812 aaPredicted RBP21.7■■□□□ 1.06
TRADD-205ENST00000566247 ZBTB21Q9ULJ3 1066 aa21.7■■□□□ 1.06
TRADD-205ENST00000566247 A0A0G2JLL6 359 aaPredicted RBP21.69■■□□□ 1.06
TRADD-205ENST00000566247 TDO2P48775 406 aa21.69■■□□□ 1.06
TRADD-205ENST00000566247 SPP2Q13103 211 aa21.69■■□□□ 1.06
TRADD-205ENST00000566247 FASTKD5Q7L8L6 764 aaKnown RBP21.69■■□□□ 1.06
TRADD-205ENST00000566247 PRRT2Q7Z6L0 340 aaPredicted RBP21.69■■□□□ 1.06
TRADD-205ENST00000566247 ANKRD23Q86SG2 305 aa21.69■■□□□ 1.06
TRADD-205ENST00000566247 R3HDMLQ9H3Y0 253 aa21.69■■□□□ 1.06
TRADD-205ENST00000566247 ZCCHC17Q9NP64 241 aaKnown RBP21.69■■□□□ 1.06
TRADD-205ENST00000566247 CABP5Q9NP86 173 aa21.69■■□□□ 1.06
TRADD-205ENST00000566247 SWAP70Q9UH65 585 aa21.69■■□□□ 1.06
TRADD-205ENST00000566247 CYP2D7A0A087X1C5 515 aa21.68■■□□□ 1.06
TRADD-205ENST00000566247 GSG1L2A8MUP6 293 aa21.68■■□□□ 1.06
TRADD-205ENST00000566247 GH2P01242 217 aa21.68■■□□□ 1.06
TRADD-205ENST00000566247 PDE4AP27815 886 aa21.68■■□□□ 1.06
TRADD-205ENST00000566247 SHMT1P34896 483 aa21.68■■□□□ 1.06
TRADD-205ENST00000566247 EVX2Q03828 476 aa21.68■■□□□ 1.06
TRADD-205ENST00000566247 GABPAQ06546 454 aa21.68■■□□□ 1.06
TRADD-205ENST00000566247 ABCB5Q2M3G0 1257 aa21.68■■□□□ 1.06
TRADD-205ENST00000566247 SHROOM1Q2M3G4 852 aaPredicted RBP21.68■■□□□ 1.06
TRADD-205ENST00000566247 C12orf60Q5U649 245 aa21.68■■□□□ 1.06
TRADD-205ENST00000566247 GIMAP6Q6P9H5 292 aa21.68■■□□□ 1.06
TRADD-205ENST00000566247 CTR9Q6PD62 1173 aa21.68■■□□□ 1.06
TRADD-205ENST00000566247 ZNF296Q8WUU4 475 aaPredicted RBP21.68■■□□□ 1.06
TRADD-205ENST00000566247 NACAP1Q9BZK3 213 aa21.68■■□□□ 1.06
TRADD-205ENST00000566247 TAOK2Q9UL54 1235 aa21.68■■□□□ 1.06
TRADD-205ENST00000566247 ATAD5Q96QE3 1844 aa21.67■■□□□ 1.06
TRADD-205ENST00000566247 PDHXO00330 501 aa21.67■■□□□ 1.06
TRADD-205ENST00000566247 FKTNO75072 461 aa21.67■■□□□ 1.06
TRADD-205ENST00000566247 JAG1P78504 1218 aa21.67■■□□□ 1.06
TRADD-205ENST00000566247 TICAM2Q86XR7 235 aa21.67■■□□□ 1.06
TRADD-205ENST00000566247 DYNLL2Q96FJ2 89 aa21.67■■□□□ 1.06
TRADD-205ENST00000566247 HELLSQ9NRZ9 838 aa21.67■■□□□ 1.06
TRADD-205ENST00000566247 PATL2C9JE40 543 aaKnown RBP21.66■■□□□ 1.06
TRADD-205ENST00000566247 MPHOSPH10O00566 681 aaKnown RBP21.66■■□□□ 1.06
TRADD-205ENST00000566247 MOGSQ13724 837 aa21.66■■□□□ 1.06
TRADD-205ENST00000566247 RAB3GAP1Q15042 981 aa21.66■■□□□ 1.06
TRADD-205ENST00000566247 NOM1Q5C9Z4 860 aaKnown RBP21.66■■□□□ 1.06
TRADD-205ENST00000566247 CCDC129Q6ZRS4 1044 aa21.66■■□□□ 1.06
TRADD-205ENST00000566247 SLC44A5Q8NCS7 719 aa21.66■■□□□ 1.06
TRADD-205ENST00000566247 MINDY4BA8MYZ0 360 aa21.65■■□□□ 1.06
TRADD-205ENST00000566247 FAM227BQ96M60 508 aa21.65■■□□□ 1.06
TRADD-205ENST00000566247 WDR18Q9BV38 432 aa21.65■■□□□ 1.06
TRADD-205ENST00000566247 EPB41L4AQ9HCS5 686 aaPredicted RBP21.65■■□□□ 1.06
TRADD-205ENST00000566247 BAZ2AQ9UIF9 1905 aaKnown RBP21.65■■□□□ 1.06
TRADD-205ENST00000566247 HMGCS2P54868 508 aa21.64■■□□□ 1.05
TRADD-205ENST00000566247 NMIQ13287 307 aaPredicted RBP21.64■■□□□ 1.05
TRADD-205ENST00000566247 MTMR2Q13614 643 aa21.64■■□□□ 1.05
TRADD-205ENST00000566247 MCMDC2Q4G0Z9 681 aa21.64■■□□□ 1.05
TRADD-205ENST00000566247 SBK1Q52WX2 424 aa21.64■■□□□ 1.05
TRADD-205ENST00000566247 CENPQQ7L2Z9 268 aaPredicted RBP21.64■■□□□ 1.05
TRADD-205ENST00000566247 IFNL3Q8IZI9 196 aa21.64■■□□□ 1.05
TRADD-205ENST00000566247 PARK7Q99497 189 aaKnown RBP21.64■■□□□ 1.05
TRADD-205ENST00000566247 FEZ1Q99689 392 aa21.64■■□□□ 1.05
TRADD-205ENST00000566247 NAPBQ9H115 298 aa21.64■■□□□ 1.05
TRADD-205ENST00000566247 TMOD4Q9NZQ9 345 aa21.64■■□□□ 1.05
TRADD-205ENST00000566247 CASP8AP2Q9UKL3 1982 aa21.63■■□□□ 1.05
TRADD-205ENST00000566247 A0A0D9SFI3 127 aa21.63■■□□□ 1.05
TRADD-205ENST00000566247 SDSP20132 328 aa21.63■■□□□ 1.05
TRADD-205ENST00000566247 CDK8P49336 464 aa21.63■■□□□ 1.05
TRADD-205ENST00000566247 GPAT2Q6NUI2 795 aa21.63■■□□□ 1.05
TRADD-205ENST00000566247 C16orf86Q6ZW13 317 aa21.63■■□□□ 1.05
TRADD-205ENST00000566247 PROCA1Q8NCQ7 364 aaPredicted RBP21.63■■□□□ 1.05
TRADD-205ENST00000566247 DIAPH3Q9NSV4 1193 aa21.63■■□□□ 1.05
TRADD-205ENST00000566247 AGTPBP1Q9UPW5 1226 aa21.63■■□□□ 1.05
TRADD-205ENST00000566247 PHIPQ8WWQ0 1821 aa21.63■■□□□ 1.05
TRADD-205ENST00000566247 USP17L10C9JJH3 530 aa21.62■■□□□ 1.05
TRADD-205ENST00000566247 SMIM22K7EJ46 135 aa21.62■■□□□ 1.05
TRADD-205ENST00000566247 HIP1O00291 1037 aa21.62■■□□□ 1.05
TRADD-205ENST00000566247 TLR2O60603 784 aa21.62■■□□□ 1.05
TRADD-205ENST00000566247 BACE1P56817 501 aa21.62■■□□□ 1.05
TRADD-205ENST00000566247 DGKZQ13574 1117 aa21.62■■□□□ 1.05
TRADD-205ENST00000566247 TTC22Q5TAA0 569 aa21.62■■□□□ 1.05
TRADD-205ENST00000566247 CTU1Q7Z7A3 348 aaKnown RBP21.62■■□□□ 1.05
TRADD-205ENST00000566247 STK11IPQ8N1F8 1099 aa21.62■■□□□ 1.05
TRADD-205ENST00000566247 C19orf81C9J6K1 198 aa21.61■■□□□ 1.05
TRADD-205ENST00000566247 SP3Q02447 781 aa21.61■■□□□ 1.05
TRADD-205ENST00000566247 PABPC4Q13310 644 aaKnown RBP eCLIP21.61■■□□□ 1.05
TRADD-205ENST00000566247 SEPT2Q15019 361 aa21.61■■□□□ 1.05
TRADD-205ENST00000566247 SH3D19Q5HYK7 790 aa21.61■■□□□ 1.05
TRADD-205ENST00000566247 TMEM179Q6ZVK1 233 aa21.61■■□□□ 1.05
TRADD-205ENST00000566247 ERO1AQ96HE7 468 aa21.61■■□□□ 1.05
TRADD-205ENST00000566247 CCDC136Q96JN2 1154 aa21.61■■□□□ 1.05
TRADD-205ENST00000566247 CCDC17Q96LX7 622 aa21.61■■□□□ 1.05
TRADD-205ENST00000566247 MKNK2Q9HBH9 465 aa21.61■■□□□ 1.05
TRADD-205ENST00000566247 PNMA3Q9UL41 463 aa21.61■■□□□ 1.05
TRADD-205ENST00000566247 SLC45A1Q9Y2W3 748 aa21.61■■□□□ 1.05
TRADD-205ENST00000566247 CYP2C8P10632 490 aa21.6■■□□□ 1.05
TRADD-205ENST00000566247 MFAP1P55081 439 aaKnown RBP21.6■■□□□ 1.05
TRADD-205ENST00000566247 ZYXQ15942 572 aaKnown RBP21.6■■□□□ 1.05
TRADD-205ENST00000566247 TREML2Q5T2D2 321 aa21.6■■□□□ 1.05
TRADD-205ENST00000566247 ZNF287Q9HBT7 754 aa21.6■■□□□ 1.05
TRADD-205ENST00000566247 SLC3A2P08195 630 aaKnown RBP21.59■■□□□ 1.05
TRADD-205ENST00000566247 AKR1B1P15121 316 aa21.59■■□□□ 1.05
TRADD-205ENST00000566247 GSPT1P15170 499 aaKnown RBP21.59■■□□□ 1.05
TRADD-205ENST00000566247 USP17L2Q6R6M4 530 aa21.59■■□□□ 1.05
TRADD-205ENST00000566247 SMCR8Q8TEV9 937 aaPredicted RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms