RNA–Protein interactions for RNA: ENST00000566093.1

CNEP1R1-207, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-207ENST00000566093 PPM1JQ5JR12 505 aa5.38□□□□□ -1.55
CNEP1R1-207ENST00000566093 LRRN4CLQ8ND94 238 aa5.38□□□□□ -1.55
CNEP1R1-207ENST00000566093 GAL3ST3Q96A11 431 aa5.38□□□□□ -1.55
CNEP1R1-207ENST00000566093 TMEM74Q96NL1 305 aa5.38□□□□□ -1.55
CNEP1R1-207ENST00000566093 U3KQE9 123 aa5.38□□□□□ -1.55
CNEP1R1-207ENST00000566093 RNGTTO60942 597 aaKnown RBP5.37□□□□□ -1.55
CNEP1R1-207ENST00000566093 HCLS1P14317 486 aaPredicted RBP5.37□□□□□ -1.55
CNEP1R1-207ENST00000566093 ZNF76P36508 570 aa5.37□□□□□ -1.55
CNEP1R1-207ENST00000566093 FANCCQ00597 558 aa5.37□□□□□ -1.55
CNEP1R1-207ENST00000566093 CAMK2GQ13555 558 aaPredicted RBP5.37□□□□□ -1.55
CNEP1R1-207ENST00000566093 TTLL4Q14679 1199 aa5.37□□□□□ -1.55
CNEP1R1-207ENST00000566093 C9orf131Q5VYM1 1079 aa5.37□□□□□ -1.55
CNEP1R1-207ENST00000566093 LRFN4Q6PJG9 635 aa5.37□□□□□ -1.55
CNEP1R1-207ENST00000566093 BNC2Q6ZN30 1099 aaPredicted RBP5.37□□□□□ -1.55
CNEP1R1-207ENST00000566093 HS2ST1Q7LGA3 356 aa5.37□□□□□ -1.55
CNEP1R1-207ENST00000566093 ERMP1Q7Z2K6 904 aa5.37□□□□□ -1.55
CNEP1R1-207ENST00000566093 PLD6Q8N2A8 252 aaKnown RBP5.37□□□□□ -1.55
CNEP1R1-207ENST00000566093 SLC38A3Q99624 504 aa5.37□□□□□ -1.55
CNEP1R1-207ENST00000566093 MIR1-1HGQ9H1L0 117 aa5.37□□□□□ -1.55
CNEP1R1-207ENST00000566093 ZNF503-AS2A6NEH8 195 aa5.36□□□□□ -1.55
CNEP1R1-207ENST00000566093 NEFMP07197 916 aa5.36□□□□□ -1.55
CNEP1R1-207ENST00000566093 CD96P40200 585 aa5.36□□□□□ -1.55
CNEP1R1-207ENST00000566093 SCARA3Q6AZY7 606 aa5.36□□□□□ -1.55
CNEP1R1-207ENST00000566093 SIAH1Q8IUQ4 282 aa5.36□□□□□ -1.55
CNEP1R1-207ENST00000566093 PLPPR2Q96GM1 343 aa5.36□□□□□ -1.55
CNEP1R1-207ENST00000566093 ATXN3LQ9H3M9 355 aa5.36□□□□□ -1.55
CNEP1R1-207ENST00000566093 VAV3Q9UKW4 847 aa5.36□□□□□ -1.55
CNEP1R1-207ENST00000566093 SCAMP3O14828 347 aaKnown RBP5.35□□□□□ -1.55
CNEP1R1-207ENST00000566093 F13A1P00488 732 aa5.35□□□□□ -1.55
CNEP1R1-207ENST00000566093 GARTP22102 1010 aa5.35□□□□□ -1.55
CNEP1R1-207ENST00000566093 ERVK-24P63145 666 aa5.35□□□□□ -1.55
CNEP1R1-207ENST00000566093 HNRNPUQ00839 825 aaKnown RBP eCLIP5.35□□□□□ -1.55
CNEP1R1-207ENST00000566093 LMNB2Q03252 620 aa5.35□□□□□ -1.55
CNEP1R1-207ENST00000566093 PRKCQQ04759 706 aa5.35□□□□□ -1.55
CNEP1R1-207ENST00000566093 RING1Q06587 406 aa5.35□□□□□ -1.55
CNEP1R1-207ENST00000566093 PWP1Q13610 501 aa5.35□□□□□ -1.55
CNEP1R1-207ENST00000566093 FBXL19Q6PCT2 694 aa5.35□□□□□ -1.55
CNEP1R1-207ENST00000566093 GOLM1Q8NBJ4 401 aa5.35□□□□□ -1.55
CNEP1R1-207ENST00000566093 RNF214Q8ND24 703 aa5.35□□□□□ -1.55
CNEP1R1-207ENST00000566093 NETO1Q8TDF5 533 aa5.35□□□□□ -1.55
CNEP1R1-207ENST00000566093 RNF34Q969K3 372 aa5.35□□□□□ -1.55
CNEP1R1-207ENST00000566093 ELMO3Q96BJ8 720 aa5.35□□□□□ -1.55
CNEP1R1-207ENST00000566093 RHOVQ96L33 236 aa5.35□□□□□ -1.55
CNEP1R1-207ENST00000566093 PIDD1Q9HB75 910 aa5.35□□□□□ -1.55
CNEP1R1-207ENST00000566093 DAGLAQ9Y4D2 1042 aa5.35□□□□□ -1.55
CNEP1R1-207ENST00000566093 PRAMEF27A3QJZ7 478 aa5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 B8ZZF3 427 aa5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 GFRA2O00451 464 aa5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 KRT1P04264 644 aa5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 EIF4A3P38919 411 aaKnown RBP5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 BUD31P41223 144 aaPredicted RBP5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 HDLBPQ00341 1268 aaKnown RBP5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 ZNF394Q53GI3 561 aa5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 WIPI1Q5MNZ9 446 aaPredicted RBP5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 TTLL10Q6ZVT0 673 aa5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 CYFIP1Q7L576 1253 aa5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 HDXQ7Z353 690 aa5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 UBE3DQ7Z6J8 389 aa5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 SMYD4Q8IYR2 804 aaPredicted RBP5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 FLAD1Q8NFF5 587 aa5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 FBXO27Q8NI29 283 aa5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 ZNF296Q8WUU4 475 aaPredicted RBP5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 ISL2Q96A47 359 aa5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 SSU72Q9NP77 194 aaKnown RBP5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 PICK1Q9NRD5 415 aa5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 METTL5Q9NRN9 209 aaKnown RBP5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 ADAMTS1Q9UHI8 967 aa5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 PCDHGB7Q9Y5F8 929 aa5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 SNCAIPQ9Y6H5 919 aa5.34□□□□□ -1.55
CNEP1R1-207ENST00000566093 FAM221AA4D161 298 aa5.33□□□□□ -1.56
CNEP1R1-207ENST00000566093 CILPO75339 1184 aa5.33□□□□□ -1.56
CNEP1R1-207ENST00000566093 TSPAN15O95858 294 aa5.33□□□□□ -1.56
CNEP1R1-207ENST00000566093 NTF4P34130 210 aa5.33□□□□□ -1.56
CNEP1R1-207ENST00000566093 RACK1P63244 317 aaKnown RBP5.33□□□□□ -1.56
CNEP1R1-207ENST00000566093 RPL6Q02878 288 aaKnown RBP5.33□□□□□ -1.56
CNEP1R1-207ENST00000566093 SNAP47Q5SQN1 464 aa5.33□□□□□ -1.56
CNEP1R1-207ENST00000566093 ZBTB37Q5TC79 503 aa5.33□□□□□ -1.56
CNEP1R1-207ENST00000566093 CCDC84Q86UT8 332 aaPredicted RBP5.33□□□□□ -1.56
CNEP1R1-207ENST00000566093 USP48Q86UV5 1035 aa5.33□□□□□ -1.56
CNEP1R1-207ENST00000566093 METTL16Q86W50 562 aaKnown RBP5.33□□□□□ -1.56
CNEP1R1-207ENST00000566093 FAM181AQ8N9Y4 354 aa5.33□□□□□ -1.56
CNEP1R1-207ENST00000566093 PI4K2BQ8TCG2 481 aa5.33□□□□□ -1.56
CNEP1R1-207ENST00000566093 GATAD2BQ8WXI9 593 aa5.33□□□□□ -1.56
CNEP1R1-207ENST00000566093 TOX2Q96NM4 488 aa5.33□□□□□ -1.56
CNEP1R1-207ENST00000566093 PCOLCE2Q9UKZ9 415 aa5.33□□□□□ -1.56
CNEP1R1-207ENST00000566093 LRRC10BA6NIK2 292 aa5.32□□□□□ -1.56
CNEP1R1-207ENST00000566093 TLR3O15455 904 aaKnown RBP5.32□□□□□ -1.56
CNEP1R1-207ENST00000566093 GREM1O60565 184 aa5.32□□□□□ -1.56
CNEP1R1-207ENST00000566093 RAP1GAPP47736 663 aa5.32□□□□□ -1.56
CNEP1R1-207ENST00000566093 CYP27C1Q4G0S4 372 aa5.32□□□□□ -1.56
CNEP1R1-207ENST00000566093 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.32□□□□□ -1.56
CNEP1R1-207ENST00000566093 RAPGEFL1Q9UHV5 662 aa5.32□□□□□ -1.56
CNEP1R1-207ENST00000566093 DDX41Q9UJV9 622 aaKnown RBP5.32□□□□□ -1.56
CNEP1R1-207ENST00000566093 PLAGL2Q9UPG8 496 aa5.32□□□□□ -1.56
CNEP1R1-207ENST00000566093 FANCGO15287 622 aa5.31□□□□□ -1.56
CNEP1R1-207ENST00000566093 GRK4P32298 578 aa5.31□□□□□ -1.56
CNEP1R1-207ENST00000566093 ETF1P62495 437 aaKnown RBP5.31□□□□□ -1.56
CNEP1R1-207ENST00000566093 CDK5R2Q13319 367 aa5.31□□□□□ -1.56
CNEP1R1-207ENST00000566093 FAM196AQ6ZSG2 479 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms