RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 BEGAINQ9BUH8 593 aa25.18■■□□□ 1.62
SHCBP1-205ENST00000566016 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.18■■□□□ 1.62
SHCBP1-205ENST00000566016 ZMYM6O95789 1325 aa25.18■■□□□ 1.62
SHCBP1-205ENST00000566016 HSPA1AP0DMV8 641 aaKnown RBP25.17■■□□□ 1.62
SHCBP1-205ENST00000566016 HSPA1BP0DMV9 641 aaKnown RBP25.17■■□□□ 1.62
SHCBP1-205ENST00000566016 EVX2Q03828 476 aa25.17■■□□□ 1.62
SHCBP1-205ENST00000566016 SNAPC2Q13487 334 aa25.17■■□□□ 1.62
SHCBP1-205ENST00000566016 CWC27Q6UX04 472 aaKnown RBP25.17■■□□□ 1.62
SHCBP1-205ENST00000566016 C16orf86Q6ZW13 317 aa25.17■■□□□ 1.62
SHCBP1-205ENST00000566016 NAPBQ9H115 298 aa25.17■■□□□ 1.62
SHCBP1-205ENST00000566016 SAGE1Q9NXZ1 904 aa25.17■■□□□ 1.62
SHCBP1-205ENST00000566016 RAD50Q92878 1312 aa25.17■■□□□ 1.62
SHCBP1-205ENST00000566016 LAMA4Q16363 1823 aa25.16■■□□□ 1.62
SHCBP1-205ENST00000566016 ALX1Q15699 326 aa25.16■■□□□ 1.62
SHCBP1-205ENST00000566016 ZBTB21Q9ULJ3 1066 aa25.16■■□□□ 1.62
SHCBP1-205ENST00000566016 CYP2D7A0A087X1C5 515 aa25.15■■□□□ 1.62
SHCBP1-205ENST00000566016 CXCL11O14625 94 aa25.15■■□□□ 1.62
SHCBP1-205ENST00000566016 CERKLQ49MI3 558 aaPredicted RBP25.15■■□□□ 1.62
SHCBP1-205ENST00000566016 AFG3L2Q9Y4W6 797 aa25.15■■□□□ 1.62
SHCBP1-205ENST00000566016 ZHX2Q9Y6X8 837 aa25.15■■□□□ 1.62
SHCBP1-205ENST00000566016 LOC285556D6RIA3 1793 aa25.15■■□□□ 1.62
SHCBP1-205ENST00000566016 GREB1LQ9C091 1923 aaPredicted RBP25.15■■□□□ 1.62
SHCBP1-205ENST00000566016 HSPD1P10809 573 aaKnown RBP25.15■■□□□ 1.62
SHCBP1-205ENST00000566016 CETPP11597 493 aa25.15■■□□□ 1.62
SHCBP1-205ENST00000566016 VPS53Q5VIR6 699 aa25.15■■□□□ 1.62
SHCBP1-205ENST00000566016 SKAP1Q86WV1 359 aa25.15■■□□□ 1.62
SHCBP1-205ENST00000566016 USP17L5A8MUK1 530 aa25.14■■□□□ 1.61
SHCBP1-205ENST00000566016 GDF11O95390 407 aa25.14■■□□□ 1.61
SHCBP1-205ENST00000566016 CHMLP26374 656 aa25.14■■□□□ 1.61
SHCBP1-205ENST00000566016 IFNL1Q8IU54 200 aa25.14■■□□□ 1.61
SHCBP1-205ENST00000566016 SLC44A5Q8NCS7 719 aa25.14■■□□□ 1.61
SHCBP1-205ENST00000566016 DYNLL2Q96FJ2 89 aa25.14■■□□□ 1.61
SHCBP1-205ENST00000566016 ALDH1A1P00352 501 aa25.13■■□□□ 1.61
SHCBP1-205ENST00000566016 CDK8P49336 464 aa25.13■■□□□ 1.61
SHCBP1-205ENST00000566016 JAG1P78504 1218 aa25.13■■□□□ 1.61
SHCBP1-205ENST00000566016 RUFY2Q8WXA3 655 aa25.13■■□□□ 1.61
SHCBP1-205ENST00000566016 BRI3BPQ8WY22 251 aa25.13■■□□□ 1.61
SHCBP1-205ENST00000566016 WDR18Q9BV38 432 aa25.13■■□□□ 1.61
SHCBP1-205ENST00000566016 AS3MTQ9HBK9 375 aa25.13■■□□□ 1.61
SHCBP1-205ENST00000566016 ZCCHC17Q9NP64 241 aaKnown RBP25.13■■□□□ 1.61
SHCBP1-205ENST00000566016 CCL15-CCL14A0A0B4J2E2 113 aa25.12■■□□□ 1.61
SHCBP1-205ENST00000566016 MINDY4BA8MYZ0 360 aa25.12■■□□□ 1.61
SHCBP1-205ENST00000566016 SMIM22K7EJ46 135 aa25.12■■□□□ 1.61
SHCBP1-205ENST00000566016 GH2P01242 217 aa25.12■■□□□ 1.61
SHCBP1-205ENST00000566016 CCL15Q16663 113 aa25.12■■□□□ 1.61
SHCBP1-205ENST00000566016 ABCB5Q2M3G0 1257 aa25.12■■□□□ 1.61
SHCBP1-205ENST00000566016 OTUD7BQ6GQQ9 843 aa25.12■■□□□ 1.61
SHCBP1-205ENST00000566016 ZNF280CQ8ND82 737 aa25.12■■□□□ 1.61
SHCBP1-205ENST00000566016 CCDC17Q96LX7 622 aa25.12■■□□□ 1.61
SHCBP1-205ENST00000566016 CFHR5Q9BXR6 569 aa25.12■■□□□ 1.61
SHCBP1-205ENST00000566016 ZNF287Q9HBT7 754 aa25.12■■□□□ 1.61
SHCBP1-205ENST00000566016 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.12■■□□□ 1.61
SHCBP1-205ENST00000566016 A0A0G2JLL6 359 aaPredicted RBP25.11■■□□□ 1.61
SHCBP1-205ENST00000566016 PRRT2Q7Z6L0 340 aaPredicted RBP25.11■■□□□ 1.61
SHCBP1-205ENST00000566016 CABP5Q9NP86 173 aa25.11■■□□□ 1.61
SHCBP1-205ENST00000566016 RNF186Q9NXI6 227 aa25.11■■□□□ 1.61
SHCBP1-205ENST00000566016 IGF2BP3O00425 579 aaKnown RBP eCLIP25.1■■□□□ 1.61
SHCBP1-205ENST00000566016 PPARAQ07869 468 aa25.1■■□□□ 1.61
SHCBP1-205ENST00000566016 SHROOM1Q2M3G4 852 aaPredicted RBP25.1■■□□□ 1.61
SHCBP1-205ENST00000566016 PTPN18Q99952 460 aa25.1■■□□□ 1.61
SHCBP1-205ENST00000566016 DSCC1Q9BVC3 393 aa25.1■■□□□ 1.61
SHCBP1-205ENST00000566016 ANAPC4Q9UJX5 808 aa25.1■■□□□ 1.61
SHCBP1-205ENST00000566016 FOXN1O15353 648 aa25.09■■□□□ 1.61
SHCBP1-205ENST00000566016 FGAP02671 866 aa25.09■■□□□ 1.61
SHCBP1-205ENST00000566016 SLC3A2P08195 630 aaKnown RBP25.09■■□□□ 1.61
SHCBP1-205ENST00000566016 TMEM179Q6ZVK1 233 aa25.09■■□□□ 1.61
SHCBP1-205ENST00000566016 CCDC84Q86UT8 332 aaPredicted RBP25.09■■□□□ 1.61
SHCBP1-205ENST00000566016 CTCFP49711 727 aaPredicted RBP25.09■■□□□ 1.61
SHCBP1-205ENST00000566016 MOGSQ13724 837 aa25.09■■□□□ 1.61
SHCBP1-205ENST00000566016 FASTKD5Q7L8L6 764 aaKnown RBP25.09■■□□□ 1.61
SHCBP1-205ENST00000566016 IL25Q9H293 177 aa25.09■■□□□ 1.61
SHCBP1-205ENST00000566016 TRIM75PA6NK02 468 aa25.08■■□□□ 1.6
SHCBP1-205ENST00000566016 SPP2Q13103 211 aa25.08■■□□□ 1.6
SHCBP1-205ENST00000566016 SGSM2O43147 1006 aa25.07■■□□□ 1.6
SHCBP1-205ENST00000566016 TRPA1O75762 1119 aa25.07■■□□□ 1.6
SHCBP1-205ENST00000566016 GUCY1A2P33402 732 aa25.07■■□□□ 1.6
SHCBP1-205ENST00000566016 PDE4BQ07343 736 aa25.07■■□□□ 1.6
SHCBP1-205ENST00000566016 SH3D19Q5HYK7 790 aa25.07■■□□□ 1.6
SHCBP1-205ENST00000566016 PROCA1Q8NCQ7 364 aaPredicted RBP25.07■■□□□ 1.6
SHCBP1-205ENST00000566016 AKR1B1P15121 316 aa25.06■■□□□ 1.6
SHCBP1-205ENST00000566016 RASA1P20936 1047 aa25.06■■□□□ 1.6
SHCBP1-205ENST00000566016 BACE1P56817 501 aa25.06■■□□□ 1.6
SHCBP1-205ENST00000566016 RAB3GAP1Q15042 981 aa25.06■■□□□ 1.6
SHCBP1-205ENST00000566016 ANKRD23Q86SG2 305 aa25.06■■□□□ 1.6
SHCBP1-205ENST00000566016 MKNK2Q9HBH9 465 aa25.06■■□□□ 1.6
SHCBP1-205ENST00000566016 C19orf81C9J6K1 198 aa25.05■■□□□ 1.6
SHCBP1-205ENST00000566016 BTBD19C9JJ37 291 aa25.05■■□□□ 1.6
SHCBP1-205ENST00000566016 HSPA8P11142 646 aaKnown RBP25.05■■□□□ 1.6
SHCBP1-205ENST00000566016 NOM1Q5C9Z4 860 aaKnown RBP25.05■■□□□ 1.6
SHCBP1-205ENST00000566016 FAM43AQ8N2R8 423 aa25.05■■□□□ 1.6
SHCBP1-205ENST00000566016 SLC45A1Q9Y2W3 748 aa25.05■■□□□ 1.6
SHCBP1-205ENST00000566016 PLIN4Q96Q06 1357 aa25.05■■□□□ 1.6
SHCBP1-205ENST00000566016 USP17L10C9JJH3 530 aa25.04■■□□□ 1.6
SHCBP1-205ENST00000566016 MPHOSPH10O00566 681 aaKnown RBP25.04■■□□□ 1.6
SHCBP1-205ENST00000566016 SEPT2Q15019 361 aa25.04■■□□□ 1.6
SHCBP1-205ENST00000566016 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.04■■□□□ 1.6
SHCBP1-205ENST00000566016 FGRP09769 529 aa25.03■■□□□ 1.6
SHCBP1-205ENST00000566016 PCP11498 1178 aaKnown RBP25.03■■□□□ 1.6
SHCBP1-205ENST00000566016 MTMR2Q13614 643 aa25.03■■□□□ 1.6
SHCBP1-205ENST00000566016 KIAA1683Q9H0B3 1180 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms