RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 CRACR2BQ8N4Y2 399 aaPredicted RBP22.02■■□□□ 1.12
COMMD4-213ENST00000565834 ZNF274Q96GC6 653 aaPredicted RBP22.02■■□□□ 1.12
COMMD4-213ENST00000565834 TAOK2Q9UL54 1235 aa22.02■■□□□ 1.12
COMMD4-213ENST00000565834 TSPY3P0CV98 308 aa22.01■■□□□ 1.11
COMMD4-213ENST00000565834 TSPY8P0CW00 308 aa22.01■■□□□ 1.11
COMMD4-213ENST00000565834 TNNI2P48788 182 aa22.01■■□□□ 1.11
COMMD4-213ENST00000565834 NFXL1Q6ZNB6 911 aa22.01■■□□□ 1.11
COMMD4-213ENST00000565834 SGMS1Q86VZ5 419 aa22.01■■□□□ 1.11
COMMD4-213ENST00000565834 NECAB1Q8N987 351 aa22.01■■□□□ 1.11
COMMD4-213ENST00000565834 TRIM34Q9BYJ4 488 aa22.01■■□□□ 1.11
COMMD4-213ENST00000565834 EPS15P42566 896 aa22.01■■□□□ 1.11
COMMD4-213ENST00000565834 TNFAIP1Q13829 316 aa22.01■■□□□ 1.11
COMMD4-213ENST00000565834 FOXP4Q8IVH2 680 aaPredicted RBP22.01■■□□□ 1.11
COMMD4-213ENST00000565834 TMTC2Q8N394 836 aa22.01■■□□□ 1.11
COMMD4-213ENST00000565834 CSRNP1Q96S65 589 aa22.01■■□□□ 1.11
COMMD4-213ENST00000565834 BRPF3Q9ULD4 1205 aa22.01■■□□□ 1.11
COMMD4-213ENST00000565834 CCDC69A6NI79 296 aa22■■□□□ 1.11
COMMD4-213ENST00000565834 PFKFB2O60825 505 aa22■■□□□ 1.11
COMMD4-213ENST00000565834 PDIA3P30101 505 aaKnown RBP22■■□□□ 1.11
COMMD4-213ENST00000565834 SEC23AQ15436 765 aa22■■□□□ 1.11
COMMD4-213ENST00000565834 ENAHQ8N8S7 591 aaPredicted RBP22■■□□□ 1.11
COMMD4-213ENST00000565834 GTF3C6Q969F1 213 aa22■■□□□ 1.11
COMMD4-213ENST00000565834 SENP2Q9HC62 589 aa22■■□□□ 1.11
COMMD4-213ENST00000565834 ZSCAN21Q9Y5A6 473 aaPredicted RBP22■■□□□ 1.11
COMMD4-213ENST00000565834 GOLGA8BA8MQT2 603 aa21.99■■□□□ 1.11
COMMD4-213ENST00000565834 ST3GAL1Q11201 340 aa21.99■■□□□ 1.11
COMMD4-213ENST00000565834 CCDC178Q5BJE1 867 aa21.99■■□□□ 1.11
COMMD4-213ENST00000565834 TRPM4Q8TD43 1214 aa21.99■■□□□ 1.11
COMMD4-213ENST00000565834 SHMT1P34896 483 aa21.98■■□□□ 1.11
COMMD4-213ENST00000565834 IFIT1BQ5T764 474 aaKnown RBP21.98■■□□□ 1.11
COMMD4-213ENST00000565834 HACL1Q9UJ83 578 aa21.98■■□□□ 1.11
COMMD4-213ENST00000565834 NMT2O60551 498 aa21.98■■□□□ 1.11
COMMD4-213ENST00000565834 APOA5Q6Q788 366 aa21.98■■□□□ 1.11
COMMD4-213ENST00000565834 METTL16Q86W50 562 aaKnown RBP21.98■■□□□ 1.11
COMMD4-213ENST00000565834 NEDD1Q8NHV4 660 aa21.98■■□□□ 1.11
COMMD4-213ENST00000565834 TMEM39BQ9GZU3 492 aa21.98■■□□□ 1.11
COMMD4-213ENST00000565834 DNAJC18Q9H819 358 aa21.98■■□□□ 1.11
COMMD4-213ENST00000565834 CWC22Q9HCG8 908 aaKnown RBP21.98■■□□□ 1.11
COMMD4-213ENST00000565834 TCP11L1Q9NUJ3 509 aa21.98■■□□□ 1.11
COMMD4-213ENST00000565834 SLC12A7Q9Y666 1083 aa21.98■■□□□ 1.11
COMMD4-213ENST00000565834 ASTN2O75129 1339 aaPredicted RBP21.97■■□□□ 1.11
COMMD4-213ENST00000565834 SCRN1Q12765 414 aa21.97■■□□□ 1.11
COMMD4-213ENST00000565834 SYNE3Q6ZMZ3 975 aa21.97■■□□□ 1.11
COMMD4-213ENST00000565834 ADARB2Q9NS39 739 aaKnown RBP21.97■■□□□ 1.11
COMMD4-213ENST00000565834 PLIN4Q96Q06 1357 aa21.97■■□□□ 1.11
COMMD4-213ENST00000565834 ZBTB43O43298 467 aa21.96■■□□□ 1.11
COMMD4-213ENST00000565834 CCT2P78371 535 aaKnown RBP21.96■■□□□ 1.11
COMMD4-213ENST00000565834 RASA3Q14644 834 aa21.96■■□□□ 1.11
COMMD4-213ENST00000565834 CHMP4CQ96CF2 233 aa21.96■■□□□ 1.11
COMMD4-213ENST00000565834 L3MBTL3Q96JM7 780 aaPredicted RBP21.96■■□□□ 1.11
COMMD4-213ENST00000565834 IL17RBQ9NRM6 502 aa21.96■■□□□ 1.11
COMMD4-213ENST00000565834 HERC5Q9UII4 1024 aaKnown RBP21.96■■□□□ 1.11
COMMD4-213ENST00000565834 HPS5Q9UPZ3 1129 aa21.96■■□□□ 1.11
COMMD4-213ENST00000565834 FAM196BA6NMK8 535 aa21.95■■□□□ 1.1
COMMD4-213ENST00000565834 SLURP2P0DP57 97 aa21.95■■□□□ 1.1
COMMD4-213ENST00000565834 APOBEC3FQ8IUX4 373 aaKnown RBP21.95■■□□□ 1.1
COMMD4-213ENST00000565834 CCDC17Q96LX7 622 aa21.95■■□□□ 1.1
COMMD4-213ENST00000565834 SMC3Q9UQE7 1217 aa21.95■■□□□ 1.1
COMMD4-213ENST00000565834 GREB1LQ9C091 1923 aaPredicted RBP21.95■■□□□ 1.1
COMMD4-213ENST00000565834 GLTPD2A6NH11 291 aa21.95■■□□□ 1.1
COMMD4-213ENST00000565834 AKR1B1P15121 316 aa21.95■■□□□ 1.1
COMMD4-213ENST00000565834 DDIT3P35638 169 aa21.95■■□□□ 1.1
COMMD4-213ENST00000565834 METAP2P50579 478 aaKnown RBP eCLIP21.95■■□□□ 1.1
COMMD4-213ENST00000565834 ANGEL2Q5VTE6 544 aaKnown RBP21.95■■□□□ 1.1
COMMD4-213ENST00000565834 MICU3Q86XE3 530 aa21.95■■□□□ 1.1
COMMD4-213ENST00000565834 DGKHQ86XP1 1220 aa21.95■■□□□ 1.1
COMMD4-213ENST00000565834 RAB11FIP4Q86YS3 637 aa21.95■■□□□ 1.1
COMMD4-213ENST00000565834 ZNF654Q8IZM8 581 aa21.95■■□□□ 1.1
COMMD4-213ENST00000565834 NCOA5Q9HCD5 579 aaKnown RBP21.95■■□□□ 1.1
COMMD4-213ENST00000565834 HIRAP54198 1017 aaPredicted RBP21.94■■□□□ 1.1
COMMD4-213ENST00000565834 RCSD1Q6JBY9 416 aa21.94■■□□□ 1.1
COMMD4-213ENST00000565834 TATDN1Q6P1N9 297 aa21.94■■□□□ 1.1
COMMD4-213ENST00000565834 MYL10Q9BUA6 226 aa21.94■■□□□ 1.1
COMMD4-213ENST00000565834 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.94■■□□□ 1.1
COMMD4-213ENST00000565834 GGA3Q9NZ52 723 aa21.94■■□□□ 1.1
COMMD4-213ENST00000565834 PGAP2Q9UHJ9 254 aa21.94■■□□□ 1.1
COMMD4-213ENST00000565834 SCAF8Q9UPN6 1271 aaKnown RBP21.94■■□□□ 1.1
COMMD4-213ENST00000565834 POLR2AP24928 1970 aaKnown RBP21.93■■□□□ 1.1
COMMD4-213ENST00000565834 SCN4AP35499 1836 aa21.93■■□□□ 1.1
COMMD4-213ENST00000565834 GOLGA8AA7E2F4 631 aa21.93■■□□□ 1.1
COMMD4-213ENST00000565834 DHX16O60231 1041 aaKnown RBP21.93■■□□□ 1.1
COMMD4-213ENST00000565834 RCAN1P53805 252 aa21.93■■□□□ 1.1
COMMD4-213ENST00000565834 CERKLQ49MI3 558 aaPredicted RBP21.93■■□□□ 1.1
COMMD4-213ENST00000565834 CATIPQ7Z7H3 387 aa21.93■■□□□ 1.1
COMMD4-213ENST00000565834 CDAN1Q8IWY9 1227 aa21.93■■□□□ 1.1
COMMD4-213ENST00000565834 ANKS1AQ92625 1134 aa21.93■■□□□ 1.1
COMMD4-213ENST00000565834 LLPHQ9BRT6 129 aaKnown RBP21.93■■□□□ 1.1
COMMD4-213ENST00000565834 CIZ1Q9ULV3 898 aaPredicted RBP21.93■■□□□ 1.1
COMMD4-213ENST00000565834 RXRAP19793 462 aa21.92■■□□□ 1.1
COMMD4-213ENST00000565834 DEFB129Q9H1M3 183 aa21.92■■□□□ 1.1
COMMD4-213ENST00000565834 CHMP5Q9NZZ3 219 aa21.92■■□□□ 1.1
COMMD4-213ENST00000565834 STX8Q9UNK0 236 aa21.92■■□□□ 1.1
COMMD4-213ENST00000565834 NID2Q14112 1375 aa21.92■■□□□ 1.1
COMMD4-213ENST00000565834 MPHOSPH10O00566 681 aaKnown RBP21.91■■□□□ 1.1
COMMD4-213ENST00000565834 TBC1D12O60347 775 aa21.91■■□□□ 1.1
COMMD4-213ENST00000565834 CEP95Q96GE4 821 aa21.91■■□□□ 1.1
COMMD4-213ENST00000565834 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.91■■□□□ 1.1
COMMD4-213ENST00000565834 KAT14Q9H8E8 782 aa21.91■■□□□ 1.1
COMMD4-213ENST00000565834 DDAH1O94760 285 aa21.91■■□□□ 1.1
COMMD4-213ENST00000565834 CCDC144CPQ8IYA2 1237 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms