RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 TMPRSS2O15393 492 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 DYNC1LI2O43237 492 aaPredicted RBP6.19□□□□□ -1.42
LINC00561-201ENST00000565815 ATP2B1P20020 1258 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 SLITRK4Q8IW52 837 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 XAGE3Q8WTP9 111 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 LRRC4BQ9NT99 713 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 KLHL3Q9UH77 587 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 MROH2AA6NES4 1674 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 ZNF518AQ6AHZ1 1483 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 SCAPERQ9BY12 1400 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 B2RBV5 119 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 GNB5O14775 395 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 TRIM37O94972 964 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 PREPP48147 710 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 RPL6Q02878 288 aaKnown RBP6.19□□□□□ -1.42
LINC00561-201ENST00000565815 TTLL4Q14679 1199 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 ZC3H12AQ5D1E8 599 aaKnown RBP6.19□□□□□ -1.42
LINC00561-201ENST00000565815 FBXO11Q86XK2 927 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 SSBP05455 408 aaKnown RBP eCLIP6.19□□□□□ -1.42
LINC00561-201ENST00000565815 MPP2Q14168 576 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 CWF19L2Q2TBE0 894 aaKnown RBP6.19□□□□□ -1.42
LINC00561-201ENST00000565815 DPH6Q7L8W6 267 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 TMPRSS13Q9BYE2 586 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 ZFYVE1Q9HBF4 777 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 OSGEPQ9NPF4 335 aa6.19□□□□□ -1.42
LINC00561-201ENST00000565815 CDK11AQ9UQ88 783 aaPredicted RBP6.19□□□□□ -1.42
LINC00561-201ENST00000565815 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.18□□□□□ -1.42
LINC00561-201ENST00000565815 HTR3BO95264 441 aa6.18□□□□□ -1.42
LINC00561-201ENST00000565815 BPNT1O95861 308 aa6.18□□□□□ -1.42
LINC00561-201ENST00000565815 GRK4P32298 578 aa6.18□□□□□ -1.42
LINC00561-201ENST00000565815 ARL4DP49703 201 aa6.18□□□□□ -1.42
LINC00561-201ENST00000565815 GNL2Q13823 731 aaKnown RBP6.18□□□□□ -1.42
LINC00561-201ENST00000565815 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.18□□□□□ -1.42
LINC00561-201ENST00000565815 LSRQ86X29 649 aaPredicted RBP6.18□□□□□ -1.42
LINC00561-201ENST00000565815 SLC43A3Q8NBI5 491 aa6.18□□□□□ -1.42
LINC00561-201ENST00000565815 ST7Q9NRC1 585 aa6.18□□□□□ -1.42
LINC00561-201ENST00000565815 DISC1Q9NRI5 854 aa6.18□□□□□ -1.42
LINC00561-201ENST00000565815 ACTL7BQ9Y614 415 aa6.18□□□□□ -1.42
LINC00561-201ENST00000565815 CPS1P31327 1500 aa6.18□□□□□ -1.42
LINC00561-201ENST00000565815 TOM1O60784 492 aa6.18□□□□□ -1.42
LINC00561-201ENST00000565815 ACRP10323 421 aa6.18□□□□□ -1.42
LINC00561-201ENST00000565815 ADH5P11766 374 aa6.18□□□□□ -1.42
LINC00561-201ENST00000565815 RLBP1P12271 317 aa6.18□□□□□ -1.42
LINC00561-201ENST00000565815 ELMO3Q96BJ8 720 aa6.18□□□□□ -1.42
LINC00561-201ENST00000565815 FERD3LQ96RJ6 166 aa6.18□□□□□ -1.42
LINC00561-201ENST00000565815 RUSC1Q9BVN2 902 aa6.18□□□□□ -1.42
LINC00561-201ENST00000565815 REV1Q9UBZ9 1251 aa6.18□□□□□ -1.42
LINC00561-201ENST00000565815 USP21Q9UK80 565 aa6.18□□□□□ -1.42
LINC00561-201ENST00000565815 PCDHB10Q9UN67 800 aa6.18□□□□□ -1.42
LINC00561-201ENST00000565815 NUP153P49790 1475 aaKnown RBP6.18□□□□□ -1.42
LINC00561-201ENST00000565815 MLH3Q9UHC1 1453 aa6.17□□□□□ -1.42
LINC00561-201ENST00000565815 CHRNA4P43681 627 aa6.17□□□□□ -1.42
LINC00561-201ENST00000565815 GIMAP6Q6P9H5 292 aa6.17□□□□□ -1.42
LINC00561-201ENST00000565815 FANCD2OSQ96PS1 177 aa6.17□□□□□ -1.42
LINC00561-201ENST00000565815 UBL7Q96S82 380 aaPredicted RBP6.17□□□□□ -1.42
LINC00561-201ENST00000565815 MKL2Q9ULH7 1088 aa6.17□□□□□ -1.42
LINC00561-201ENST00000565815 KDM5CP41229 1560 aa6.17□□□□□ -1.42
LINC00561-201ENST00000565815 SMAD7O15105 426 aaKnown RBP6.17□□□□□ -1.42
LINC00561-201ENST00000565815 ZEB1P37275 1124 aaPredicted RBP6.17□□□□□ -1.42
LINC00561-201ENST00000565815 NRG1Q02297 640 aaPredicted RBP6.17□□□□□ -1.42
LINC00561-201ENST00000565815 KIF4BQ2VIQ3 1234 aa6.17□□□□□ -1.42
LINC00561-201ENST00000565815 C12orf50Q8NA57 414 aaPredicted RBP6.17□□□□□ -1.42
LINC00561-201ENST00000565815 ACSF2Q96CM8 615 aaPredicted RBP6.17□□□□□ -1.42
LINC00561-201ENST00000565815 LRRC3Q9BY71 257 aa6.17□□□□□ -1.42
LINC00561-201ENST00000565815 RAD18Q9NS91 495 aa6.17□□□□□ -1.42
LINC00561-201ENST00000565815 PTPRKQ15262 1439 aa6.17□□□□□ -1.42
LINC00561-201ENST00000565815 MED1Q15648 1581 aaPredicted RBP6.17□□□□□ -1.42
LINC00561-201ENST00000565815 CHURC1-FNTBB4DL54 471 aa6.16□□□□□ -1.42
LINC00561-201ENST00000565815 IREB2P48200 963 aaKnown RBP6.16□□□□□ -1.42
LINC00561-201ENST00000565815 RING1Q06587 406 aa6.16□□□□□ -1.42
LINC00561-201ENST00000565815 BMS1Q14692 1282 aaKnown RBP6.16□□□□□ -1.42
LINC00561-201ENST00000565815 LRRC14Q15048 493 aa6.16□□□□□ -1.42
LINC00561-201ENST00000565815 CCDC144BQ3MJ40 725 aa6.16□□□□□ -1.42
LINC00561-201ENST00000565815 OVOS1Q6IE37 1185 aa6.16□□□□□ -1.42
LINC00561-201ENST00000565815 ANKS3Q6ZW76 656 aa6.16□□□□□ -1.42
LINC00561-201ENST00000565815 WNT8BQ93098 351 aa6.16□□□□□ -1.42
LINC00561-201ENST00000565815 SAMM50Q9Y512 469 aa6.16□□□□□ -1.42
LINC00561-201ENST00000565815 ELNP15502 786 aa6.16□□□□□ -1.42
LINC00561-201ENST00000565815 GLB1P16278 677 aa6.16□□□□□ -1.42
LINC00561-201ENST00000565815 RAB6AP20340 208 aa6.16□□□□□ -1.42
LINC00561-201ENST00000565815 DYMQ7RTS9 669 aa6.16□□□□□ -1.42
LINC00561-201ENST00000565815 SHISA5Q8N114 240 aa6.16□□□□□ -1.42
LINC00561-201ENST00000565815 CPLX3Q8WVH0 158 aa6.16□□□□□ -1.42
LINC00561-201ENST00000565815 UBXN4Q92575 508 aa6.16□□□□□ -1.42
LINC00561-201ENST00000565815 SRRTQ9BXP5 876 aaKnown RBP6.16□□□□□ -1.42
LINC00561-201ENST00000565815 ZNRF3Q9ULT6 936 aa6.16□□□□□ -1.42
LINC00561-201ENST00000565815 C3P01024 1663 aa6.15□□□□□ -1.42
LINC00561-201ENST00000565815 EEA1Q15075 1411 aa6.15□□□□□ -1.42
LINC00561-201ENST00000565815 ETF1P62495 437 aaKnown RBP6.15□□□□□ -1.42
LINC00561-201ENST00000565815 SF3A1Q15459 793 aaKnown RBP6.15□□□□□ -1.42
LINC00561-201ENST00000565815 PPP2R5EQ16537 467 aa6.15□□□□□ -1.42
LINC00561-201ENST00000565815 NUTM2GQ5VZR2 741 aa6.15□□□□□ -1.42
LINC00561-201ENST00000565815 CDPF1Q6NVV7 123 aa6.15□□□□□ -1.42
LINC00561-201ENST00000565815 LGR4Q9BXB1 951 aa6.15□□□□□ -1.42
LINC00561-201ENST00000565815 EMILIN2Q9BXX0 1053 aa6.15□□□□□ -1.42
LINC00561-201ENST00000565815 ENAMQ9NRM1 1142 aa6.15□□□□□ -1.42
LINC00561-201ENST00000565815 CRIM1Q9NZV1 1036 aa6.15□□□□□ -1.42
LINC00561-201ENST00000565815 MYO5CQ9NQX4 1742 aa6.15□□□□□ -1.42
LINC00561-201ENST00000565815 ZNF142P52746 1687 aaPredicted RBP6.15□□□□□ -1.42
LINC00561-201ENST00000565815 F8W735 103 aaPredicted RBP6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms