RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 ITGBL1O95965 494 aaPredicted RBP3.62□□□□□ -1.83
CHD9-216ENST00000565803 FAM163BP0C2L3 166 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 KCNA2P16389 499 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 MECOMQ03112 1051 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 STK3Q13188 491 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 TAF11Q15544 211 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 TMCO3Q6UWJ1 677 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 NYAP1Q6ZVC0 841 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 ANKMY2Q8IV38 441 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 ZNF654Q8IZM8 581 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 ENAHQ8N8S7 591 aaPredicted RBP3.62□□□□□ -1.83
CHD9-216ENST00000565803 TIFAQ96CG3 184 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 PFDN2Q9UHV9 154 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 PASKQ96RG2 1323 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 A0A1W2PRQ8 180 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 TCEA3O75764 348 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 NAT2P11245 290 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 CDKN1CP49918 316 aaPredicted RBP3.61□□□□□ -1.83
CHD9-216ENST00000565803 CHAF1AQ13111 956 aaPredicted RBP3.61□□□□□ -1.83
CHD9-216ENST00000565803 HOMER1Q86YM7 354 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 SLC43A3Q8NBI5 491 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 JPH3Q8WXH2 748 aaPredicted RBP3.61□□□□□ -1.83
CHD9-216ENST00000565803 DNAJC7Q99615 494 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 MORC2Q9Y6X9 1032 aaPredicted RBP3.61□□□□□ -1.83
CHD9-216ENST00000565803 ZNF646O15015 1829 aaPredicted RBP3.61□□□□□ -1.83
CHD9-216ENST00000565803 SYNDIG1LA6NDD5 238 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 IRS4O14654 1257 aaPredicted RBP3.61□□□□□ -1.83
CHD9-216ENST00000565803 TNFAIP3P21580 790 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 GUCY2FP51841 1108 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 PAK2Q13177 524 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 TMC7Q7Z402 723 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 SULF1Q8IWU6 871 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 TRIM22Q8IYM9 498 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 RGL4Q8IZJ4 473 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 CARD10Q9BWT7 1032 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 ZNF408Q9H9D4 720 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 CASS4Q9NQ75 786 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 KMT5AQ9NQR1 393 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 SNTG2Q9NY99 539 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 PNMA3Q9UL41 463 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 PCDHGC3Q9UN70 934 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 F5H423 210 aaPredicted RBP3.61□□□□□ -1.83
CHD9-216ENST00000565803 SOX11P35716 441 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 PIK3CAP42336 1068 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 MASP1P48740 699 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 RACK1P63244 317 aaKnown RBP3.61□□□□□ -1.83
CHD9-216ENST00000565803 PLCB3Q01970 1234 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 MTA1Q13330 715 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 MORN1Q5T089 497 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 HS2ST1Q7LGA3 356 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 DDX42Q86XP3 938 aaKnown RBP eCLIP3.61□□□□□ -1.83
CHD9-216ENST00000565803 CLASRPQ8N2M8 674 aaKnown RBP3.61□□□□□ -1.83
CHD9-216ENST00000565803 ARMC5Q96C12 935 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 ZNF830Q96NB3 372 aaPredicted RBP3.61□□□□□ -1.83
CHD9-216ENST00000565803 ORAI2Q96SN7 254 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 TRIM6Q9C030 488 aaPredicted RBP3.61□□□□□ -1.83
CHD9-216ENST00000565803 RBM28Q9NW13 759 aaKnown RBP3.61□□□□□ -1.83
CHD9-216ENST00000565803 PCDHB9Q9Y5E1 797 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 SNX5Q9Y5X3 404 aa3.61□□□□□ -1.83
CHD9-216ENST00000565803 CCDC163A0A0D9SF12 145 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 TRIM64CA6NLI5 447 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 VSTM5A8MXK1 200 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 FOXN1O15353 648 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 KIF5CO60282 957 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 NASPP49321 788 aaPredicted RBP3.6□□□□□ -1.83
CHD9-216ENST00000565803 MMP14P50281 582 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 LMNB2Q03252 620 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 MSS51Q4VC12 460 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 HNRNPLLQ8WVV9 542 aaKnown RBP3.6□□□□□ -1.83
CHD9-216ENST00000565803 PAWRQ96IZ0 340 aaKnown RBP3.6□□□□□ -1.83
CHD9-216ENST00000565803 NBPF3Q9H094 633 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 PPP1R9AQ9ULJ8 1098 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 DNMT3AQ9Y6K1 912 aaPredicted RBP3.6□□□□□ -1.83
CHD9-216ENST00000565803 N4BP2Q86UW6 1770 aaPredicted RBP3.6□□□□□ -1.83
CHD9-216ENST00000565803 PIK3C2GO75747 1445 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 IPO5O00410 1097 aaKnown RBP3.6□□□□□ -1.83
CHD9-216ENST00000565803 ATF4P18848 351 aaPredicted RBP3.6□□□□□ -1.83
CHD9-216ENST00000565803 EXOSC10Q01780 885 aaKnown RBP3.6□□□□□ -1.83
CHD9-216ENST00000565803 TBC1D10BQ4KMP7 808 aaPredicted RBP3.6□□□□□ -1.83
CHD9-216ENST00000565803 LARP1BQ659C4 914 aaKnown RBP3.6□□□□□ -1.83
CHD9-216ENST00000565803 CCDC73Q6ZRK6 1079 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 CAPN12Q6ZSI9 719 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 SLF2Q8IX21 1173 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.6□□□□□ -1.83
CHD9-216ENST00000565803 NKX2-3Q8TAU0 364 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 CLP1Q92989 425 aaKnown RBP3.6□□□□□ -1.83
CHD9-216ENST00000565803 CDHR1Q96JP9 859 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 AGBL1Q96MI9 1066 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 PDGFDQ9GZP0 370 aaPredicted RBP3.6□□□□□ -1.83
CHD9-216ENST00000565803 LUZP4Q9P127 313 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 TSR3Q9UJK0 312 aaKnown RBP3.6□□□□□ -1.83
CHD9-216ENST00000565803 SYNPO2Q9UMS6 1093 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 PNPLA7Q6ZV29 1317 aa3.6□□□□□ -1.83
CHD9-216ENST00000565803 SNX2O60749 519 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 PRPHP41219 470 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 HALP42357 657 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 DDX10Q13206 875 aaKnown RBP3.59□□□□□ -1.83
CHD9-216ENST00000565803 SIM2Q14190 667 aaPredicted RBP3.59□□□□□ -1.83
CHD9-216ENST00000565803 GPR162Q16538 588 aa3.59□□□□□ -1.83
CHD9-216ENST00000565803 SWT1Q5T5J6 900 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms