RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 ADGRA2Q96PE1 1338 aa7.78□□□□□ -1.16
TCF4-228ENST00000565393 MPHOSPH10O00566 681 aaKnown RBP7.77□□□□□ -1.17
TCF4-228ENST00000565393 GJB1P08034 283 aa7.77□□□□□ -1.17
TCF4-228ENST00000565393 ELNP15502 786 aa7.77□□□□□ -1.17
TCF4-228ENST00000565393 PLCD1P51178 756 aa7.77□□□□□ -1.17
TCF4-228ENST00000565393 ZYXQ15942 572 aaKnown RBP7.77□□□□□ -1.17
TCF4-228ENST00000565393 ABCB5Q2M3G0 1257 aa7.77□□□□□ -1.17
TCF4-228ENST00000565393 SHROOM1Q2M3G4 852 aaPredicted RBP7.77□□□□□ -1.17
TCF4-228ENST00000565393 C20orf194Q5TEA3 1177 aa7.77□□□□□ -1.17
TCF4-228ENST00000565393 TMED8Q6PL24 325 aaPredicted RBP7.77□□□□□ -1.17
TCF4-228ENST00000565393 USP17L2Q6R6M4 530 aa7.77□□□□□ -1.17
TCF4-228ENST00000565393 METTL16Q86W50 562 aaKnown RBP7.77□□□□□ -1.17
TCF4-228ENST00000565393 GPRC5AQ8NFJ5 357 aa7.77□□□□□ -1.17
TCF4-228ENST00000565393 GCC1Q96CN9 775 aa7.77□□□□□ -1.17
TCF4-228ENST00000565393 FEZ1Q99689 392 aa7.77□□□□□ -1.17
TCF4-228ENST00000565393 CWC22Q9HCG8 908 aaKnown RBP7.77□□□□□ -1.17
TCF4-228ENST00000565393 MCM9Q9NXL9 1143 aa7.77□□□□□ -1.17
TCF4-228ENST00000565393 SERPINB13Q9UIV8 391 aa7.77□□□□□ -1.17
TCF4-228ENST00000565393 ZBTB21Q9ULJ3 1066 aa7.77□□□□□ -1.17
TCF4-228ENST00000565393 ZNF532Q9HCE3 1301 aa7.77□□□□□ -1.17
TCF4-228ENST00000565393 ECM29Q5VYK3 1845 aa7.76□□□□□ -1.17
TCF4-228ENST00000565393 SGPL1O95470 568 aa7.76□□□□□ -1.17
TCF4-228ENST00000565393 PDE6AP16499 860 aa7.76□□□□□ -1.17
TCF4-228ENST00000565393 ATP5JP18859 108 aa7.76□□□□□ -1.17
TCF4-228ENST00000565393 HOXA7P31268 230 aaPredicted RBP7.76□□□□□ -1.17
TCF4-228ENST00000565393 GJA8P48165 433 aa7.76□□□□□ -1.17
TCF4-228ENST00000565393 IRF5Q13568 498 aa7.76□□□□□ -1.17
TCF4-228ENST00000565393 PDE3AQ14432 1141 aa7.76□□□□□ -1.17
TCF4-228ENST00000565393 FAM110CQ1W6H9 321 aa7.76□□□□□ -1.17
TCF4-228ENST00000565393 TATDN1Q6P1N9 297 aa7.76□□□□□ -1.17
TCF4-228ENST00000565393 PXYLP1Q8TE99 480 aa7.76□□□□□ -1.17
TCF4-228ENST00000565393 U2AF1L4Q8WU68 220 aaKnown RBP7.76□□□□□ -1.17
TCF4-228ENST00000565393 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.76□□□□□ -1.17
TCF4-228ENST00000565393 EDC3Q96F86 508 aaKnown RBP7.76□□□□□ -1.17
TCF4-228ENST00000565393 RIOK1Q9BRS2 568 aaKnown RBP7.76□□□□□ -1.17
TCF4-228ENST00000565393 LRRCC1Q9C099 1032 aa7.76□□□□□ -1.17
TCF4-228ENST00000565393 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.76□□□□□ -1.17
TCF4-228ENST00000565393 UNC93B1Q9H1C4 597 aa7.76□□□□□ -1.17
TCF4-228ENST00000565393 DNAJC18Q9H819 358 aa7.76□□□□□ -1.17
TCF4-228ENST00000565393 ARMT1Q9H993 441 aa7.76□□□□□ -1.17
TCF4-228ENST00000565393 EMILIN3Q9NT22 766 aa7.76□□□□□ -1.17
TCF4-228ENST00000565393 PAG1Q9NWQ8 432 aa7.76□□□□□ -1.17
TCF4-228ENST00000565393 USP17L15C9J2P7 530 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 USP17L13C9JLJ4 530 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 USP17L11C9JVI0 530 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 USP17L18D6R9N7 530 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 USP17L22D6RA61 530 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 USP17L17D6RBQ6 530 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 USP17L19D6RCP7 530 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 USP17L20D6RJB6 530 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 SMARCA5O60264 1052 aaPredicted RBP7.75□□□□□ -1.17
TCF4-228ENST00000565393 PEX10O60683 326 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 INHAP05111 366 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 CYP2B6P20813 491 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 HERVK_113P62684 666 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 USP17L24Q0WX57 530 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 Q3C1V9 767 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 SDR42E1Q8WUS8 393 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 DDRGK1Q96HY6 314 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 DEFB118Q96PH6 123 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 PAGR1Q9BTK6 254 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 HTATIP2Q9BUP3 242 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 RBPJLQ9UBG7 517 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 ARAP2Q8WZ64 1704 aa7.75□□□□□ -1.17
TCF4-228ENST00000565393 COL2A1P02458 1487 aaPredicted RBP7.75□□□□□ -1.17
TCF4-228ENST00000565393 PRKAB2O43741 272 aa7.74□□□□□ -1.17
TCF4-228ENST00000565393 SLC34A2O95436 690 aa7.74□□□□□ -1.17
TCF4-228ENST00000565393 CYP2D6P10635 497 aa7.74□□□□□ -1.17
TCF4-228ENST00000565393 USP14P54578 494 aa7.74□□□□□ -1.17
TCF4-228ENST00000565393 SEPT2Q15019 361 aa7.74□□□□□ -1.17
TCF4-228ENST00000565393 SLFNL1Q499Z3 407 aa7.74□□□□□ -1.17
TCF4-228ENST00000565393 WDR78Q5VTH9 848 aa7.74□□□□□ -1.17
TCF4-228ENST00000565393 ZSCAN25Q6NSZ9 544 aa7.74□□□□□ -1.17
TCF4-228ENST00000565393 AMOTL1Q8IY63 956 aa7.74□□□□□ -1.17
TCF4-228ENST00000565393 LCORLQ8N3X6 602 aa7.74□□□□□ -1.17
TCF4-228ENST00000565393 ACER1Q8TDN7 264 aa7.74□□□□□ -1.17
TCF4-228ENST00000565393 HAUS7Q99871 368 aa7.74□□□□□ -1.17
TCF4-228ENST00000565393 NUDT12Q9BQG2 462 aa7.74□□□□□ -1.17
TCF4-228ENST00000565393 EHD4Q9H223 541 aa7.74□□□□□ -1.17
TCF4-228ENST00000565393 TXNRD2Q9NNW7 524 aa7.74□□□□□ -1.17
TCF4-228ENST00000565393 HMX1Q9NP08 348 aaPredicted RBP7.74□□□□□ -1.17
TCF4-228ENST00000565393 MORF4L1Q9UBU8 362 aa7.74□□□□□ -1.17
TCF4-228ENST00000565393 GJD2Q9UKL4 321 aa7.74□□□□□ -1.17
TCF4-228ENST00000565393 TCRBV5S4A2TA0A5A2 114 aa7.73□□□□□ -1.17
TCF4-228ENST00000565393 USP17L12C9JPN9 530 aa7.73□□□□□ -1.17
TCF4-228ENST00000565393 USP17L21D6R901 530 aa7.73□□□□□ -1.17
TCF4-228ENST00000565393 H0YGN5 161 aa7.73□□□□□ -1.17
TCF4-228ENST00000565393 GLRX3O76003 335 aaKnown RBP7.73□□□□□ -1.17
TCF4-228ENST00000565393 MBD4O95243 580 aa7.73□□□□□ -1.17
TCF4-228ENST00000565393 MAPK4P31152 587 aa7.73□□□□□ -1.17
TCF4-228ENST00000565393 SHMT1P34896 483 aa7.73□□□□□ -1.17
TCF4-228ENST00000565393 ADD2P35612 726 aa7.73□□□□□ -1.17
TCF4-228ENST00000565393 HABP4Q5JVS0 413 aaKnown RBP7.73□□□□□ -1.17
TCF4-228ENST00000565393 SAMD1Q6SPF0 538 aaPredicted RBP7.73□□□□□ -1.17
TCF4-228ENST00000565393 CATSPERGQ6ZRH7 1159 aa7.73□□□□□ -1.17
TCF4-228ENST00000565393 PLEKHH3Q7Z736 793 aa7.73□□□□□ -1.17
TCF4-228ENST00000565393 GTF3C2Q8WUA4 911 aaPredicted RBP7.73□□□□□ -1.17
TCF4-228ENST00000565393 DYNLL2Q96FJ2 89 aa7.73□□□□□ -1.17
TCF4-228ENST00000565393 KIAA1683Q9H0B3 1180 aa7.73□□□□□ -1.17
TCF4-228ENST00000565393 RPAP3Q9H6T3 665 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms