RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 DCP1AQ9NPI6 582 aaPredicted RBP30.98■■■□□ 2.55
NME3-208ENST00000565379 AMOTL1Q8IY63 956 aa30.97■■■□□ 2.55
NME3-208ENST00000565379 SDR42E1Q8WUS8 393 aa30.97■■■□□ 2.55
NME3-208ENST00000565379 GSG1L2A8MUP6 293 aa30.96■■■□□ 2.55
NME3-208ENST00000565379 SGSM2O43147 1006 aa30.96■■■□□ 2.55
NME3-208ENST00000565379 PRKAB2O43741 272 aa30.96■■■□□ 2.55
NME3-208ENST00000565379 MOGSQ13724 837 aa30.96■■■□□ 2.55
NME3-208ENST00000565379 CCDC129Q6ZRS4 1044 aa30.96■■■□□ 2.55
NME3-208ENST00000565379 CCDC84Q86UT8 332 aaPredicted RBP30.96■■■□□ 2.55
NME3-208ENST00000565379 TAOK2Q9UL54 1235 aa30.96■■■□□ 2.55
NME3-208ENST00000565379 APPP05067 770 aa30.95■■■□□ 2.55
NME3-208ENST00000565379 MAP3K10Q02779 954 aa30.95■■■□□ 2.55
NME3-208ENST00000565379 TTC6Q86TZ1 520 aa30.95■■■□□ 2.55
NME3-208ENST00000565379 ZNF589Q86UQ0 364 aaPredicted RBP30.95■■■□□ 2.55
NME3-208ENST00000565379 ERO1AQ96HE7 468 aa30.95■■■□□ 2.55
NME3-208ENST00000565379 KCNH4Q9UQ05 1017 aa30.95■■■□□ 2.55
NME3-208ENST00000565379 ZSWIM8A7E2V4 1837 aa30.95■■■□□ 2.55
NME3-208ENST00000565379 CENPFP49454 3210 aa30.94■■■□□ 2.54
NME3-208ENST00000565379 FOCADQ5VW36 1801 aa30.94■■■□□ 2.54
NME3-208ENST00000565379 HLA-DOAP06340 250 aa30.94■■■□□ 2.54
NME3-208ENST00000565379 SP3Q02447 781 aa30.94■■■□□ 2.54
NME3-208ENST00000565379 ESYT1Q9BSJ8 1104 aa30.94■■■□□ 2.54
NME3-208ENST00000565379 ZFYVE28Q9HCC9 887 aa30.94■■■□□ 2.54
NME3-208ENST00000565379 MCM9Q9NXL9 1143 aa30.94■■■□□ 2.54
NME3-208ENST00000565379 EIF5BO60841 1220 aaKnown RBP30.93■■■□□ 2.54
NME3-208ENST00000565379 ALX1Q15699 326 aa30.93■■■□□ 2.54
NME3-208ENST00000565379 SCYL3Q8IZE3 742 aa30.93■■■□□ 2.54
NME3-208ENST00000565379 PI4KBQ9UBF8 816 aa30.93■■■□□ 2.54
NME3-208ENST00000565379 ARPP21Q9UBL0 812 aaPredicted RBP30.93■■■□□ 2.54
NME3-208ENST00000565379 HSPD1P10809 573 aaKnown RBP30.92■■■□□ 2.54
NME3-208ENST00000565379 IFNL3Q8IZI9 196 aa30.92■■■□□ 2.54
NME3-208ENST00000565379 DSCC1Q9BVC3 393 aa30.92■■■□□ 2.54
NME3-208ENST00000565379 POLR3DP05423 398 aaPredicted RBP30.91■■■□□ 2.54
NME3-208ENST00000565379 TDO2P48775 406 aa30.91■■■□□ 2.54
NME3-208ENST00000565379 RRP1BQ14684 758 aaKnown RBP30.91■■■□□ 2.54
NME3-208ENST00000565379 SBK1Q52WX2 424 aa30.91■■■□□ 2.54
NME3-208ENST00000565379 KIAA1211Q6ZU35 1233 aa30.91■■■□□ 2.54
NME3-208ENST00000565379 NAPBQ9H115 298 aa30.91■■■□□ 2.54
NME3-208ENST00000565379 ZMYM6O95789 1325 aa30.91■■■□□ 2.54
NME3-208ENST00000565379 SIPA1L1O43166 1804 aa30.9■■■□□ 2.54
NME3-208ENST00000565379 ECM2O94769 699 aaPredicted RBP30.9■■■□□ 2.54
NME3-208ENST00000565379 PTPRAP18433 802 aa30.9■■■□□ 2.54
NME3-208ENST00000565379 PRPF38BQ5VTL8 546 aaKnown RBP30.9■■■□□ 2.54
NME3-208ENST00000565379 FOXP4Q8IVH2 680 aaPredicted RBP30.9■■■□□ 2.54
NME3-208ENST00000565379 ARHGAP39Q9C0H5 1083 aa30.9■■■□□ 2.54
NME3-208ENST00000565379 PALD1Q9ULE6 856 aa30.9■■■□□ 2.54
NME3-208ENST00000565379 ZHX2Q9Y6X8 837 aa30.9■■■□□ 2.54
NME3-208ENST00000565379 DOCK1Q14185 1865 aa30.9■■■□□ 2.54
NME3-208ENST00000565379 CDK5RAP2Q96SN8 1893 aa30.9■■■□□ 2.54
NME3-208ENST00000565379 TBC1D12O60347 775 aa30.89■■■□□ 2.54
NME3-208ENST00000565379 EHD4Q9H223 541 aa30.89■■■□□ 2.54
NME3-208ENST00000565379 EFCC1Q9HA90 598 aa30.89■■■□□ 2.54
NME3-208ENST00000565379 SAP30BPQ9UHR5 308 aaKnown RBP30.89■■■□□ 2.54
NME3-208ENST00000565379 HERC5Q9UII4 1024 aaKnown RBP30.89■■■□□ 2.54
NME3-208ENST00000565379 PDHXO00330 501 aa30.88■■■□□ 2.53
NME3-208ENST00000565379 VPS53Q5VIR6 699 aa30.88■■■□□ 2.53
NME3-208ENST00000565379 GPAT2Q6NUI2 795 aa30.88■■■□□ 2.53
NME3-208ENST00000565379 EPB41L4AQ9HCS5 686 aaPredicted RBP30.88■■■□□ 2.53
NME3-208ENST00000565379 PICK1Q9NRD5 415 aa30.88■■■□□ 2.53
NME3-208ENST00000565379 CTNNA3Q9UI47 895 aa30.88■■■□□ 2.53
NME3-208ENST00000565379 PTPN22Q9Y2R2 807 aa30.88■■■□□ 2.53
NME3-208ENST00000565379 PHIPQ8WWQ0 1821 aa30.88■■■□□ 2.53
NME3-208ENST00000565379 USP17L12C9JPN9 530 aa30.87■■■□□ 2.53
NME3-208ENST00000565379 USP17L21D6R901 530 aa30.87■■■□□ 2.53
NME3-208ENST00000565379 TLR2O60603 784 aa30.87■■■□□ 2.53
NME3-208ENST00000565379 CTR9Q6PD62 1173 aa30.87■■■□□ 2.53
NME3-208ENST00000565379 ANKRD23Q86SG2 305 aa30.87■■■□□ 2.53
NME3-208ENST00000565379 METTL16Q86W50 562 aaKnown RBP30.87■■■□□ 2.53
NME3-208ENST00000565379 IL25Q9H293 177 aa30.87■■■□□ 2.53
NME3-208ENST00000565379 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.87■■■□□ 2.53
NME3-208ENST00000565379 CPA4Q9UI42 421 aa30.87■■■□□ 2.53
NME3-208ENST00000565379 FOXP2O15409 715 aa30.86■■■□□ 2.53
NME3-208ENST00000565379 C12orf60Q5U649 245 aa30.86■■■□□ 2.53
NME3-208ENST00000565379 TRIM34Q9BYJ4 488 aa30.86■■■□□ 2.53
NME3-208ENST00000565379 ZCCHC17Q9NP64 241 aaKnown RBP30.86■■■□□ 2.53
NME3-208ENST00000565379 AFG3L2Q9Y4W6 797 aa30.86■■■□□ 2.53
NME3-208ENST00000565379 NAV1Q8NEY1 1877 aa30.86■■■□□ 2.53
NME3-208ENST00000565379 ADGRA2Q96PE1 1338 aa30.85■■■□□ 2.53
NME3-208ENST00000565379 CTNND1O60716 968 aaKnown RBP30.85■■■□□ 2.53
NME3-208ENST00000565379 SLC4A8Q2Y0W8 1093 aa30.85■■■□□ 2.53
NME3-208ENST00000565379 SERPINB13Q9UIV8 391 aa30.85■■■□□ 2.53
NME3-208ENST00000565379 FGAP02671 866 aa30.84■■■□□ 2.53
NME3-208ENST00000565379 CRACR2BQ8N4Y2 399 aaPredicted RBP30.84■■■□□ 2.53
NME3-208ENST00000565379 PTPRFP10586 1907 aa30.84■■■□□ 2.53
NME3-208ENST00000565379 DDX60LQ5H9U9 1706 aaKnown RBP30.84■■■□□ 2.53
NME3-208ENST00000565379 MYH1P12882 1939 aa30.83■■■□□ 2.53
NME3-208ENST00000565379 A0A0G2JLL6 359 aaPredicted RBP30.83■■■□□ 2.53
NME3-208ENST00000565379 TRIM75PA6NK02 468 aa30.83■■■□□ 2.53
NME3-208ENST00000565379 CXCL11O14625 94 aa30.83■■■□□ 2.53
NME3-208ENST00000565379 REC8O95072 547 aa30.83■■■□□ 2.53
NME3-208ENST00000565379 SLC3A2P08195 630 aaKnown RBP30.83■■■□□ 2.53
NME3-208ENST00000565379 CTGFP29279 349 aa30.83■■■□□ 2.53
NME3-208ENST00000565379 ARHGEF6Q15052 776 aa30.83■■■□□ 2.53
NME3-208ENST00000565379 SHROOM1Q2M3G4 852 aaPredicted RBP30.83■■■□□ 2.53
NME3-208ENST00000565379 PRRT2Q7Z6L0 340 aaPredicted RBP30.83■■■□□ 2.53
NME3-208ENST00000565379 DNAJC18Q9H819 358 aa30.83■■■□□ 2.53
NME3-208ENST00000565379 SWAP70Q9UH65 585 aa30.83■■■□□ 2.53
NME3-208ENST00000565379 U3KPZ7 1027 aaPredicted RBP30.83■■■□□ 2.53
NME3-208ENST00000565379 EPB41L2O43491 1005 aaKnown RBP30.82■■■□□ 2.52
NME3-208ENST00000565379 CYP2C8P10632 490 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms