RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 RBAK-RBAKDNI3L0D1 243 aa7.04□□□□□ -1.28
PALB2-203ENST00000565038 SLITRK5O94991 958 aa7.04□□□□□ -1.28
PALB2-203ENST00000565038 HTR3BO95264 441 aa7.04□□□□□ -1.28
PALB2-203ENST00000565038 CST3P01034 146 aaPredicted RBP7.04□□□□□ -1.28
PALB2-203ENST00000565038 FOSL1P15407 271 aa7.04□□□□□ -1.28
PALB2-203ENST00000565038 MCM4P33991 863 aa7.04□□□□□ -1.28
PALB2-203ENST00000565038 GRIK1P39086 918 aa7.04□□□□□ -1.28
PALB2-203ENST00000565038 CAP2P40123 477 aa7.04□□□□□ -1.28
PALB2-203ENST00000565038 ZNF654Q8IZM8 581 aa7.04□□□□□ -1.28
PALB2-203ENST00000565038 RIN3Q8TB24 985 aa7.04□□□□□ -1.28
PALB2-203ENST00000565038 NKD1Q969G9 470 aa7.04□□□□□ -1.28
PALB2-203ENST00000565038 NT5C1AQ9BXI3 368 aa7.04□□□□□ -1.28
PALB2-203ENST00000565038 LRRC3Q9BY71 257 aa7.04□□□□□ -1.28
PALB2-203ENST00000565038 REV1Q9UBZ9 1251 aa7.04□□□□□ -1.28
PALB2-203ENST00000565038 ADAM30Q9UKF2 790 aa7.04□□□□□ -1.28
PALB2-203ENST00000565038 PCDHB14Q9Y5E9 798 aa7.04□□□□□ -1.28
PALB2-203ENST00000565038 U3KQE9 123 aa7.04□□□□□ -1.28
PALB2-203ENST00000565038 HYAL3O43820 417 aaPredicted RBP7.03□□□□□ -1.28
PALB2-203ENST00000565038 CD97P48960 835 aa7.03□□□□□ -1.28
PALB2-203ENST00000565038 CPSF6Q16630 551 aaKnown RBP eCLIP7.03□□□□□ -1.28
PALB2-203ENST00000565038 SLC6A19Q695T7 634 aa7.03□□□□□ -1.28
PALB2-203ENST00000565038 GK5Q6ZS86 529 aa7.03□□□□□ -1.28
PALB2-203ENST00000565038 MCATQ8IVS2 390 aaKnown RBP7.03□□□□□ -1.28
PALB2-203ENST00000565038 MRPL41Q8IXM3 137 aaKnown RBP7.03□□□□□ -1.28
PALB2-203ENST00000565038 MFSD2AQ8NA29 543 aa7.03□□□□□ -1.28
PALB2-203ENST00000565038 FAM13CQ8NE31 585 aa7.03□□□□□ -1.28
PALB2-203ENST00000565038 HEXIM2Q96MH2 286 aaKnown RBP7.03□□□□□ -1.28
PALB2-203ENST00000565038 PCMTD2Q9NV79 361 aa7.03□□□□□ -1.28
PALB2-203ENST00000565038 KLHL3Q9UH77 587 aa7.03□□□□□ -1.28
PALB2-203ENST00000565038 PRR36Q9H6K5 1346 aa7.02□□□□□ -1.28
PALB2-203ENST00000565038 CHURC1-FNTBB4DL54 471 aa7.02□□□□□ -1.29
PALB2-203ENST00000565038 DNAJA2O60884 412 aa7.02□□□□□ -1.29
PALB2-203ENST00000565038 EOMESO95936 686 aa7.02□□□□□ -1.29
PALB2-203ENST00000565038 CLCQ05315 142 aa7.02□□□□□ -1.29
PALB2-203ENST00000565038 LRP8Q14114 963 aa7.02□□□□□ -1.29
PALB2-203ENST00000565038 TMEM201Q5SNT2 666 aa7.02□□□□□ -1.29
PALB2-203ENST00000565038 LETMD1Q6P1Q0 360 aa7.02□□□□□ -1.29
PALB2-203ENST00000565038 INTS5Q6P9B9 1019 aaKnown RBP7.02□□□□□ -1.29
PALB2-203ENST00000565038 FAM214BQ7L5A3 538 aa7.02□□□□□ -1.29
PALB2-203ENST00000565038 ZC3H7BQ9UGR2 993 aaKnown RBP7.02□□□□□ -1.29
PALB2-203ENST00000565038 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.02□□□□□ -1.29
PALB2-203ENST00000565038 CNTNAP4Q9C0A0 1308 aa7.01□□□□□ -1.29
PALB2-203ENST00000565038 PAK2Q13177 524 aa7.01□□□□□ -1.29
PALB2-203ENST00000565038 ARTNQ5T4W7 220 aa7.01□□□□□ -1.29
PALB2-203ENST00000565038 ARHGAP27Q6ZUM4 889 aa7.01□□□□□ -1.29
PALB2-203ENST00000565038 CDH24Q86UP0 819 aa7.01□□□□□ -1.29
PALB2-203ENST00000565038 TPX2Q9ULW0 747 aaKnown RBP7.01□□□□□ -1.29
PALB2-203ENST00000565038 E9PSI1 815 aa7□□□□□ -1.29
PALB2-203ENST00000565038 TCF3P15923 654 aa7□□□□□ -1.29
PALB2-203ENST00000565038 ITIH2P19823 946 aa7□□□□□ -1.29
PALB2-203ENST00000565038 RAD51AP2Q09MP3 1159 aa7□□□□□ -1.29
PALB2-203ENST00000565038 MSMPQ1L6U9 139 aa7□□□□□ -1.29
PALB2-203ENST00000565038 SLITRK4Q8IW52 837 aa7□□□□□ -1.29
PALB2-203ENST00000565038 PLD6Q8N2A8 252 aaKnown RBP7□□□□□ -1.29
PALB2-203ENST00000565038 Q8N3U1 123 aa7□□□□□ -1.29
PALB2-203ENST00000565038 ACBD3Q9H3P7 528 aa7□□□□□ -1.29
PALB2-203ENST00000565038 ZFP64Q9NPA5 681 aa7□□□□□ -1.29
PALB2-203ENST00000565038 SPINK2P20155 84 aa6.99□□□□□ -1.29
PALB2-203ENST00000565038 ZNF165P49910 485 aa6.99□□□□□ -1.29
PALB2-203ENST00000565038 YARSP54577 528 aaKnown RBP6.99□□□□□ -1.29
PALB2-203ENST00000565038 OXCT1P55809 520 aa6.99□□□□□ -1.29
PALB2-203ENST00000565038 PRDM5Q9NQX1 630 aaPredicted RBP6.99□□□□□ -1.29
PALB2-203ENST00000565038 GTF2IRD1Q9UHL9 959 aa6.99□□□□□ -1.29
PALB2-203ENST00000565038 SLC22A31A6NKX4 558 aa6.98□□□□□ -1.29
PALB2-203ENST00000565038 KIAA1324LA8MWY0 1029 aaPredicted RBP6.98□□□□□ -1.29
PALB2-203ENST00000565038 ATE1O95260 518 aa6.98□□□□□ -1.29
PALB2-203ENST00000565038 ERCC5P28715 1186 aaPredicted RBP6.98□□□□□ -1.29
PALB2-203ENST00000565038 TNNI2P48788 182 aa6.98□□□□□ -1.29
PALB2-203ENST00000565038 MLECQ14165 292 aa6.98□□□□□ -1.29
PALB2-203ENST00000565038 DTX1Q86Y01 620 aa6.98□□□□□ -1.29
PALB2-203ENST00000565038 REXO1Q8N1G1 1221 aaKnown RBP6.98□□□□□ -1.29
PALB2-203ENST00000565038 TGIF2Q9GZN2 237 aa6.98□□□□□ -1.29
PALB2-203ENST00000565038 ANTXR1Q9H6X2 564 aa6.98□□□□□ -1.29
PALB2-203ENST00000565038 CCSER2Q9H7U1 834 aa6.98□□□□□ -1.29
PALB2-203ENST00000565038 EHMT1Q9H9B1 1298 aa6.98□□□□□ -1.29
PALB2-203ENST00000565038 PRR33A8MZF0 331 aa6.97□□□□□ -1.29
PALB2-203ENST00000565038 IGF2BP3O00425 579 aaKnown RBP eCLIP6.97□□□□□ -1.29
PALB2-203ENST00000565038 ADAMTS4O75173 837 aa6.97□□□□□ -1.29
PALB2-203ENST00000565038 CBX7O95931 251 aa6.97□□□□□ -1.29
PALB2-203ENST00000565038 ARSHQ5FYA8 562 aa6.97□□□□□ -1.29
PALB2-203ENST00000565038 SFRP5Q5T4F7 317 aa6.97□□□□□ -1.29
PALB2-203ENST00000565038 OVOS1Q6IE37 1185 aa6.97□□□□□ -1.29
PALB2-203ENST00000565038 SLFN12Q8IYM2 578 aa6.97□□□□□ -1.29
PALB2-203ENST00000565038 PHACTR4Q8IZ21 702 aa6.97□□□□□ -1.29
PALB2-203ENST00000565038 DNAJB8Q8NHS0 232 aa6.97□□□□□ -1.29
PALB2-203ENST00000565038 BAHD1Q8TBE0 780 aaPredicted RBP6.97□□□□□ -1.29
PALB2-203ENST00000565038 NETO1Q8TDF5 533 aa6.97□□□□□ -1.29
PALB2-203ENST00000565038 PPP1R13LQ8WUF5 828 aa6.97□□□□□ -1.29
PALB2-203ENST00000565038 CYB5D2Q8WUJ1 264 aa6.97□□□□□ -1.29
PALB2-203ENST00000565038 KIF2CQ99661 725 aa6.97□□□□□ -1.29
PALB2-203ENST00000565038 GINM1Q9NU53 330 aa6.97□□□□□ -1.29
PALB2-203ENST00000565038 PLAGL2Q9UPG8 496 aa6.97□□□□□ -1.29
PALB2-203ENST00000565038 CEP131Q9UPN4 1083 aa6.97□□□□□ -1.29
PALB2-203ENST00000565038 GNAT3A8MTJ3 354 aa6.96□□□□□ -1.3
PALB2-203ENST00000565038 CEACAM5P06731 702 aa6.96□□□□□ -1.3
PALB2-203ENST00000565038 FBXW10Q5XX13 1052 aa6.96□□□□□ -1.3
PALB2-203ENST00000565038 GPRASP2Q96D09 838 aa6.96□□□□□ -1.3
PALB2-203ENST00000565038 FERD3LQ96RJ6 166 aa6.96□□□□□ -1.3
PALB2-203ENST00000565038 BSDC1Q9NW68 430 aaPredicted RBP6.96□□□□□ -1.3
PALB2-203ENST00000565038 GMIPQ9P107 970 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms