RNA–Protein interactions for RNA: ENST00000564948.1

CX3CL1-203, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 3 BASIC

Gene CX3CL1, Length 563 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-203ENST00000564948 TTC6Q86TZ1 520 aa18.31■□□□□ 0.52
CX3CL1-203ENST00000564948 NKX2-3Q8TAU0 364 aa18.31■□□□□ 0.52
CX3CL1-203ENST00000564948 COA7Q96BR5 231 aa18.31■□□□□ 0.52
CX3CL1-203ENST00000564948 DNAJC2Q99543 621 aaKnown RBP18.31■□□□□ 0.52
CX3CL1-203ENST00000564948 BCL11AQ9H165 835 aa18.31■□□□□ 0.52
CX3CL1-203ENST00000564948 SERPINB13Q9UIV8 391 aa18.31■□□□□ 0.52
CX3CL1-203ENST00000564948 GABRQQ9UN88 632 aa18.31■□□□□ 0.52
CX3CL1-203ENST00000564948 LOC285556D6RIA3 1793 aa18.31■□□□□ 0.52
CX3CL1-203ENST00000564948 PDE4DIPQ5VU43 2346 aa18.31■□□□□ 0.52
CX3CL1-203ENST00000564948 MAGEB6P1A0A0J9YX57 407 aa18.3■□□□□ 0.52
CX3CL1-203ENST00000564948 USP17L10C9JJH3 530 aa18.3■□□□□ 0.52
CX3CL1-203ENST00000564948 FLT3LGP49771 235 aa18.3■□□□□ 0.52
CX3CL1-203ENST00000564948 IRX3P78415 501 aaPredicted RBP18.3■□□□□ 0.52
CX3CL1-203ENST00000564948 MTFR1Q15390 333 aa18.3■□□□□ 0.52
CX3CL1-203ENST00000564948 SLC9C2Q5TAH2 1124 aa18.3■□□□□ 0.52
CX3CL1-203ENST00000564948 ASCC2Q9H1I8 757 aaPredicted RBP18.3■□□□□ 0.52
CX3CL1-203ENST00000564948 EHD4Q9H223 541 aa18.3■□□□□ 0.52
CX3CL1-203ENST00000564948 MYO5AQ9Y4I1 1855 aaKnown RBP18.3■□□□□ 0.52
CX3CL1-203ENST00000564948 GOLIM4O00461 696 aa18.29■□□□□ 0.52
CX3CL1-203ENST00000564948 PDE6AP16499 860 aa18.29■□□□□ 0.52
CX3CL1-203ENST00000564948 IRF5Q13568 498 aa18.29■□□□□ 0.52
CX3CL1-203ENST00000564948 RIOK1Q9BRS2 568 aaKnown RBP18.29■□□□□ 0.52
CX3CL1-203ENST00000564948 CRNKL1Q9BZJ0 848 aaKnown RBP18.29■□□□□ 0.52
CX3CL1-203ENST00000564948 CDK5RAP2Q96SN8 1893 aa18.29■□□□□ 0.52
CX3CL1-203ENST00000564948 ADCY3O60266 1144 aa18.28■□□□□ 0.52
CX3CL1-203ENST00000564948 CCL5P13501 91 aa18.28■□□□□ 0.52
CX3CL1-203ENST00000564948 HOXA7P31268 230 aaPredicted RBP18.28■□□□□ 0.52
CX3CL1-203ENST00000564948 JAG1P78504 1218 aa18.28■□□□□ 0.52
CX3CL1-203ENST00000564948 PXYLP1Q8TE99 480 aa18.28■□□□□ 0.52
CX3CL1-203ENST00000564948 GCC1Q96CN9 775 aa18.28■□□□□ 0.52
CX3CL1-203ENST00000564948 RNF208Q9H0X6 261 aa18.28■□□□□ 0.52
CX3CL1-203ENST00000564948 ZNF532Q9HCE3 1301 aa18.27■□□□□ 0.52
CX3CL1-203ENST00000564948 GH2P01242 217 aa18.27■□□□□ 0.52
CX3CL1-203ENST00000564948 POLR3DP05423 398 aaPredicted RBP18.27■□□□□ 0.52
CX3CL1-203ENST00000564948 GJB1P08034 283 aa18.27■□□□□ 0.52
CX3CL1-203ENST00000564948 SHROOM1Q2M3G4 852 aaPredicted RBP18.27■□□□□ 0.52
CX3CL1-203ENST00000564948 TATDN1Q6P1N9 297 aa18.27■□□□□ 0.52
CX3CL1-203ENST00000564948 USP17L2Q6R6M4 530 aa18.27■□□□□ 0.52
CX3CL1-203ENST00000564948 MGAMO43451 1857 aa18.26■□□□□ 0.51
CX3CL1-203ENST00000564948 BRCA2P51587 3418 aa18.26■□□□□ 0.51
CX3CL1-203ENST00000564948 KIAA0100Q14667 2235 aaKnown RBP18.26■□□□□ 0.51
CX3CL1-203ENST00000564948 ATP5JP18859 108 aa18.26■□□□□ 0.51
CX3CL1-203ENST00000564948 GJA8P48165 433 aa18.26■□□□□ 0.51
CX3CL1-203ENST00000564948 CERKLQ49MI3 558 aaPredicted RBP18.26■□□□□ 0.51
CX3CL1-203ENST00000564948 C20orf194Q5TEA3 1177 aa18.26■□□□□ 0.51
CX3CL1-203ENST00000564948 GTF3C2Q8WUA4 911 aaPredicted RBP18.26■□□□□ 0.51
CX3CL1-203ENST00000564948 FEZ1Q99689 392 aa18.26■□□□□ 0.51
CX3CL1-203ENST00000564948 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.26■□□□□ 0.51
CX3CL1-203ENST00000564948 CABP5Q9NP86 173 aa18.26■□□□□ 0.51
CX3CL1-203ENST00000564948 PAG1Q9NWQ8 432 aa18.26■□□□□ 0.51
CX3CL1-203ENST00000564948 MORF4L1Q9UBU8 362 aa18.26■□□□□ 0.51
CX3CL1-203ENST00000564948 TAOK2Q9UL54 1235 aa18.26■□□□□ 0.51
CX3CL1-203ENST00000564948 INHAP05111 366 aa18.25■□□□□ 0.51
CX3CL1-203ENST00000564948 ABCB5Q2M3G0 1257 aa18.25■□□□□ 0.51
CX3CL1-203ENST00000564948 SHISA4Q96DD7 197 aa18.25■□□□□ 0.51
CX3CL1-203ENST00000564948 LRRCC1Q9C099 1032 aa18.25■□□□□ 0.51
CX3CL1-203ENST00000564948 BOLA2Q9H3K6 86 aa18.25■□□□□ 0.51
CX3CL1-203ENST00000564948 MYH1P12882 1939 aa18.24■□□□□ 0.51
CX3CL1-203ENST00000564948 TCRBV5S4A2TA0A5A2 114 aa18.24■□□□□ 0.51
CX3CL1-203ENST00000564948 ELNP15502 786 aa18.24■□□□□ 0.51
CX3CL1-203ENST00000564948 PLCD1P51178 756 aa18.24■□□□□ 0.51
CX3CL1-203ENST00000564948 USP14P54578 494 aa18.24■□□□□ 0.51
CX3CL1-203ENST00000564948 HERVK_113P62684 666 aa18.24■□□□□ 0.51
CX3CL1-203ENST00000564948 RAB3GAP1Q15042 981 aa18.24■□□□□ 0.51
CX3CL1-203ENST00000564948 EDC3Q96F86 508 aaKnown RBP18.24■□□□□ 0.51
CX3CL1-203ENST00000564948 C12orf42Q96LP6 360 aa18.24■□□□□ 0.51
CX3CL1-203ENST00000564948 P2RX7Q99572 595 aaKnown RBP18.24■□□□□ 0.51
CX3CL1-203ENST00000564948 HAUS7Q99871 368 aa18.24■□□□□ 0.51
CX3CL1-203ENST00000564948 MCM9Q9NXL9 1143 aa18.24■□□□□ 0.51
CX3CL1-203ENST00000564948 MKI67P46013 3256 aaKnown RBP18.24■□□□□ 0.51
CX3CL1-203ENST00000564948 LCORLQ8N3X6 602 aa18.23■□□□□ 0.51
CX3CL1-203ENST00000564948 GPRC5AQ8NFJ5 357 aa18.23■□□□□ 0.51
CX3CL1-203ENST00000564948 U2AF1L4Q8WU68 220 aaKnown RBP18.23■□□□□ 0.51
CX3CL1-203ENST00000564948 UNC93B1Q9H1C4 597 aa18.23■□□□□ 0.51
CX3CL1-203ENST00000564948 EMILIN3Q9NT22 766 aa18.23■□□□□ 0.51
CX3CL1-203ENST00000564948 CAPN2P17655 700 aa18.22■□□□□ 0.51
CX3CL1-203ENST00000564948 SHMT1P34896 483 aa18.22■□□□□ 0.51
CX3CL1-203ENST00000564948 ADD2P35612 726 aa18.22■□□□□ 0.51
CX3CL1-203ENST00000564948 GABPAQ06546 454 aa18.22■□□□□ 0.51
CX3CL1-203ENST00000564948 SDR42E1Q8WUS8 393 aa18.22■□□□□ 0.51
CX3CL1-203ENST00000564948 DCP1AQ9NPI6 582 aaPredicted RBP18.22■□□□□ 0.51
CX3CL1-203ENST00000564948 DDX60LQ5H9U9 1706 aaKnown RBP18.21■□□□□ 0.51
CX3CL1-203ENST00000564948 NAV1Q8NEY1 1877 aa18.21■□□□□ 0.51
CX3CL1-203ENST00000564948 USP17L15C9J2P7 530 aa18.21■□□□□ 0.51
CX3CL1-203ENST00000564948 USP17L13C9JLJ4 530 aa18.21■□□□□ 0.51
CX3CL1-203ENST00000564948 USP17L11C9JVI0 530 aa18.21■□□□□ 0.51
CX3CL1-203ENST00000564948 USP17L18D6R9N7 530 aa18.21■□□□□ 0.51
CX3CL1-203ENST00000564948 USP17L22D6RA61 530 aa18.21■□□□□ 0.51
CX3CL1-203ENST00000564948 USP17L17D6RBQ6 530 aa18.21■□□□□ 0.51
CX3CL1-203ENST00000564948 USP17L19D6RCP7 530 aa18.21■□□□□ 0.51
CX3CL1-203ENST00000564948 USP17L20D6RJB6 530 aa18.21■□□□□ 0.51
CX3CL1-203ENST00000564948 MBD4O95243 580 aa18.21■□□□□ 0.51
CX3CL1-203ENST00000564948 USP17L24Q0WX57 530 aa18.21■□□□□ 0.51
CX3CL1-203ENST00000564948 ZYXQ15942 572 aaKnown RBP18.21■□□□□ 0.51
CX3CL1-203ENST00000564948 CCAR1Q8IX12 1150 aaKnown RBP18.21■□□□□ 0.51
CX3CL1-203ENST00000564948 KIAA1683Q9H0B3 1180 aa18.21■□□□□ 0.51
CX3CL1-203ENST00000564948 ARMT1Q9H993 441 aa18.21■□□□□ 0.51
CX3CL1-203ENST00000564948 SGPL1O95470 568 aa18.2■□□□□ 0.5
CX3CL1-203ENST00000564948 HMGCRP04035 888 aa18.2■□□□□ 0.5
CX3CL1-203ENST00000564948 MAPK4P31152 587 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms