RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 YEATS4O95619 227 aa18.5■□□□□ 0.55
LINC00554-201ENST00000564841 SUGP1Q8IWZ8 645 aaKnown RBP18.5■□□□□ 0.55
LINC00554-201ENST00000564841 TRMT112Q9UI30 125 aaKnown RBP18.5■□□□□ 0.55
LINC00554-201ENST00000564841 A0A087WUV0 522 aaPredicted RBP18.49■□□□□ 0.55
LINC00554-201ENST00000564841 KIF5CO60282 957 aa18.49■□□□□ 0.55
LINC00554-201ENST00000564841 RABL6Q3YEC7 729 aaPredicted RBP18.49■□□□□ 0.55
LINC00554-201ENST00000564841 CEP112Q8N8E3 955 aa18.49■□□□□ 0.55
LINC00554-201ENST00000564841 MARCH10Q8NA82 808 aaPredicted RBP18.49■□□□□ 0.55
LINC00554-201ENST00000564841 RBL2Q08999 1139 aa18.49■□□□□ 0.55
LINC00554-201ENST00000564841 CCDC91Q7Z6B0 441 aa18.49■□□□□ 0.55
LINC00554-201ENST00000564841 PAG1Q9NWQ8 432 aa18.49■□□□□ 0.55
LINC00554-201ENST00000564841 KCPQ6ZWJ8 1503 aa18.49■□□□□ 0.55
LINC00554-201ENST00000564841 TOM1O60784 492 aa18.49■□□□□ 0.55
LINC00554-201ENST00000564841 CCDC172P0C7W6 258 aa18.49■□□□□ 0.55
LINC00554-201ENST00000564841 CYP19A1P11511 503 aaPredicted RBP18.49■□□□□ 0.55
LINC00554-201ENST00000564841 ADORA1P30542 326 aa18.49■□□□□ 0.55
LINC00554-201ENST00000564841 MAP2K2P36507 400 aa18.49■□□□□ 0.55
LINC00554-201ENST00000564841 AFDNP55196 1824 aaKnown RBP18.49■□□□□ 0.55
LINC00554-201ENST00000564841 DZIP3Q86Y13 1208 aaKnown RBP18.49■□□□□ 0.55
LINC00554-201ENST00000564841 SAMM50Q9Y512 469 aa18.49■□□□□ 0.55
LINC00554-201ENST00000564841 ABCA3Q99758 1704 aa18.48■□□□□ 0.55
LINC00554-201ENST00000564841 UBE2Q2LH0YL09 131 aa18.48■□□□□ 0.55
LINC00554-201ENST00000564841 KAT14Q9H8E8 782 aa18.48■□□□□ 0.55
LINC00554-201ENST00000564841 TFR2Q9UP52 801 aa18.48■□□□□ 0.55
LINC00554-201ENST00000564841 M0R2C6 588 aa18.48■□□□□ 0.55
LINC00554-201ENST00000564841 PRPF6O94906 941 aaKnown RBP18.48■□□□□ 0.55
LINC00554-201ENST00000564841 HDAC6Q9UBN7 1215 aa18.48■□□□□ 0.55
LINC00554-201ENST00000564841 N4BP2Q86UW6 1770 aaPredicted RBP18.48■□□□□ 0.55
LINC00554-201ENST00000564841 CTAGE15A4D2H0 777 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 ENC1O14682 589 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 CTAGE8P0CG41 777 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 GSCP56915 257 aaPredicted RBP18.47■□□□□ 0.55
LINC00554-201ENST00000564841 ATG9AQ7Z3C6 839 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 CTAGE6Q86UF2 777 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 CTAGE4Q8IX94 777 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 ANKRD20A12PQ8NF67 263 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 HAUS7Q99871 368 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 TRIM10Q9UDY6 481 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 CEP83Q9Y592 693 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 FAM169AQ9Y6X4 670 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 MYH15Q9Y2K3 1946 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 NHSL1Q5SYE7 1610 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 CPP00450 1065 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 STX17P56962 302 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 KIF23Q02241 960 aaPredicted RBP18.47■□□□□ 0.55
LINC00554-201ENST00000564841 GRIN1Q05586 938 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 SEC31BQ9NQW1 1179 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 SUFUQ9UMX1 484 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 EP400Q96L91 3159 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 CTAGE9A4FU28 777 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 IFIT1P09914 478 aaKnown RBP18.47■□□□□ 0.55
LINC00554-201ENST00000564841 HSPD1P10809 573 aaKnown RBP18.47■□□□□ 0.55
LINC00554-201ENST00000564841 GGCXP38435 758 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 HELBQ8NG08 1087 aaPredicted RBP18.47■□□□□ 0.55
LINC00554-201ENST00000564841 RAI14Q9P0K7 980 aa18.47■□□□□ 0.55
LINC00554-201ENST00000564841 SPATA31A1Q5TZJ5 1347 aa18.46■□□□□ 0.55
LINC00554-201ENST00000564841 SRGAP2O75044 1071 aa18.46■□□□□ 0.55
LINC00554-201ENST00000564841 SLC39A14Q15043 492 aa18.46■□□□□ 0.55
LINC00554-201ENST00000564841 PTF1AQ7RTS3 328 aa18.46■□□□□ 0.55
LINC00554-201ENST00000564841 KBTBD3Q8NAB2 608 aa18.46■□□□□ 0.55
LINC00554-201ENST00000564841 SMARCC1Q92922 1105 aaPredicted RBP18.46■□□□□ 0.55
LINC00554-201ENST00000564841 KLF18A0A0U1RQI7 1052 aa18.46■□□□□ 0.55
LINC00554-201ENST00000564841 AKR1B15C9JRZ8 316 aaPredicted RBP18.46■□□□□ 0.55
LINC00554-201ENST00000564841 CDC25AP30304 524 aa18.46■□□□□ 0.55
LINC00554-201ENST00000564841 SWT1Q5T5J6 900 aaKnown RBP18.46■□□□□ 0.55
LINC00554-201ENST00000564841 KLHL10Q6JEL2 608 aa18.46■□□□□ 0.55
LINC00554-201ENST00000564841 NKX2-3Q8TAU0 364 aa18.46■□□□□ 0.55
LINC00554-201ENST00000564841 CEP126Q9P2H0 1117 aa18.46■□□□□ 0.55
LINC00554-201ENST00000564841 GOLGA8BA8MQT2 603 aa18.45■□□□□ 0.54
LINC00554-201ENST00000564841 EYA2O00167 538 aa18.45■□□□□ 0.54
LINC00554-201ENST00000564841 MYBL2P10244 700 aa18.45■□□□□ 0.54
LINC00554-201ENST00000564841 SCARF1Q14162 830 aa18.45■□□□□ 0.54
LINC00554-201ENST00000564841 OSBP2Q969R2 916 aa18.45■□□□□ 0.54
LINC00554-201ENST00000564841 ISCA1Q9BUE6 129 aa18.45■□□□□ 0.54
LINC00554-201ENST00000564841 MAP3K15Q6ZN16 1313 aa18.45■□□□□ 0.54
LINC00554-201ENST00000564841 SNAP23O00161 211 aa18.45■□□□□ 0.54
LINC00554-201ENST00000564841 MRPS25P82663 173 aaKnown RBP18.45■□□□□ 0.54
LINC00554-201ENST00000564841 IFIT5Q13325 482 aaKnown RBP18.45■□□□□ 0.54
LINC00554-201ENST00000564841 SLC9C2Q5TAH2 1124 aa18.45■□□□□ 0.54
LINC00554-201ENST00000564841 JPH2Q9BR39 696 aaPredicted RBP18.45■□□□□ 0.54
LINC00554-201ENST00000564841 AGXT2Q9BYV1 514 aa18.45■□□□□ 0.54
LINC00554-201ENST00000564841 GREM2Q9H772 168 aa18.45■□□□□ 0.54
LINC00554-201ENST00000564841 MAN1B1Q9UKM7 699 aa18.45■□□□□ 0.54
LINC00554-201ENST00000564841 HPSEQ9Y251 543 aa18.45■□□□□ 0.54
LINC00554-201ENST00000564841 ARFGEF2Q9Y6D5 1785 aa18.45■□□□□ 0.54
LINC00554-201ENST00000564841 FKBP15Q5T1M5 1219 aa18.44■□□□□ 0.54
LINC00554-201ENST00000564841 GIGYF2Q6Y7W6 1299 aaKnown RBP18.44■□□□□ 0.54
LINC00554-201ENST00000564841 BICDL1Q6ZP65 573 aa18.44■□□□□ 0.54
LINC00554-201ENST00000564841 ZNF274Q96GC6 653 aaPredicted RBP18.44■□□□□ 0.54
LINC00554-201ENST00000564841 INCENPQ9NQS7 918 aa18.44■□□□□ 0.54
LINC00554-201ENST00000564841 MAST3O60307 1309 aa18.44■□□□□ 0.54
LINC00554-201ENST00000564841 CDHR2Q9BYE9 1310 aa18.44■□□□□ 0.54
LINC00554-201ENST00000564841 MYO1FO00160 1098 aa18.44■□□□□ 0.54
LINC00554-201ENST00000564841 ZNF18P17022 549 aa18.44■□□□□ 0.54
LINC00554-201ENST00000564841 PPARDQ03181 441 aa18.44■□□□□ 0.54
LINC00554-201ENST00000564841 HPCAL4Q9UM19 191 aa18.44■□□□□ 0.54
LINC00554-201ENST00000564841 HPS5Q9UPZ3 1129 aa18.44■□□□□ 0.54
LINC00554-201ENST00000564841 IRS4O14654 1257 aaPredicted RBP18.44■□□□□ 0.54
LINC00554-201ENST00000564841 CPLX1O14810 134 aa18.44■□□□□ 0.54
LINC00554-201ENST00000564841 HMGB1P09429 215 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms