RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 PLCG2P16885 1265 aa19.49■□□□□ 0.71
CDH11-210ENST00000564770 DYNLL1P63167 89 aaKnown RBP19.49■□□□□ 0.71
CDH11-210ENST00000564770 TRIM32Q13049 653 aa19.49■□□□□ 0.71
CDH11-210ENST00000564770 PABPC4Q13310 644 aaKnown RBP eCLIP19.49■□□□□ 0.71
CDH11-210ENST00000564770 DIS3LQ8TF46 1054 aaKnown RBP19.49■□□□□ 0.71
CDH11-210ENST00000564770 ZNF512BQ96KM6 892 aaPredicted RBP19.49■□□□□ 0.71
CDH11-210ENST00000564770 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.49■□□□□ 0.71
CDH11-210ENST00000564770 PALD1Q9ULE6 856 aa19.49■□□□□ 0.71
CDH11-210ENST00000564770 ZBTB21Q9ULJ3 1066 aa19.49■□□□□ 0.71
CDH11-210ENST00000564770 NDUFB9Q9Y6M9 179 aa19.49■□□□□ 0.71
CDH11-210ENST00000564770 ZBTB7BO15156 539 aaPredicted RBP19.48■□□□□ 0.71
CDH11-210ENST00000564770 BACE1P56817 501 aa19.48■□□□□ 0.71
CDH11-210ENST00000564770 EAF2Q96CJ1 260 aaPredicted RBP19.48■□□□□ 0.71
CDH11-210ENST00000564770 MORF4L1Q9UBU8 362 aa19.48■□□□□ 0.71
CDH11-210ENST00000564770 SAP30BPQ9UHR5 308 aaKnown RBP19.48■□□□□ 0.71
CDH11-210ENST00000564770 GJD2Q9UKL4 321 aa19.48■□□□□ 0.71
CDH11-210ENST00000564770 NOP58Q9Y2X3 529 aaKnown RBP19.48■□□□□ 0.71
CDH11-210ENST00000564770 LAMA2P24043 3122 aaKnown RBP19.47■□□□□ 0.71
CDH11-210ENST00000564770 HMGCRP04035 888 aa19.47■□□□□ 0.71
CDH11-210ENST00000564770 ITPRIPQ8IWB1 547 aa19.47■□□□□ 0.71
CDH11-210ENST00000564770 CRACR2BQ8N4Y2 399 aaPredicted RBP19.47■□□□□ 0.71
CDH11-210ENST00000564770 TRIB2Q92519 343 aa19.47■□□□□ 0.71
CDH11-210ENST00000564770 CCDC8Q9H0W5 538 aaPredicted RBP19.47■□□□□ 0.71
CDH11-210ENST00000564770 TXNRD2Q9NNW7 524 aa19.47■□□□□ 0.71
CDH11-210ENST00000564770 TFRCP02786 760 aaKnown RBP19.46■□□□□ 0.71
CDH11-210ENST00000564770 HERVK_113P62684 666 aa19.46■□□□□ 0.71
CDH11-210ENST00000564770 IRX3P78415 501 aaPredicted RBP19.46■□□□□ 0.71
CDH11-210ENST00000564770 FTSJ3Q8IY81 847 aaKnown RBP19.46■□□□□ 0.71
CDH11-210ENST00000564770 MIGA1Q8NAN2 632 aa19.46■□□□□ 0.71
CDH11-210ENST00000564770 PAWRQ96IZ0 340 aaKnown RBP19.46■□□□□ 0.71
CDH11-210ENST00000564770 MYH8P13535 1937 aa19.45■□□□□ 0.7
CDH11-210ENST00000564770 HOXA7P31268 230 aaPredicted RBP19.45■□□□□ 0.7
CDH11-210ENST00000564770 POTEEQ6S8J3 1075 aa19.45■□□□□ 0.7
CDH11-210ENST00000564770 P2RX7Q99572 595 aaKnown RBP19.45■□□□□ 0.7
CDH11-210ENST00000564770 IDH1O75874 414 aaKnown RBP19.44■□□□□ 0.7
CDH11-210ENST00000564770 CYP7A1P22680 504 aa19.44■□□□□ 0.7
CDH11-210ENST00000564770 MNX1P50219 401 aaPredicted RBP19.44■□□□□ 0.7
CDH11-210ENST00000564770 HNRNPUQ00839 825 aaKnown RBP eCLIP19.44■□□□□ 0.7
CDH11-210ENST00000564770 CEP85Q6P2H3 762 aa19.44■□□□□ 0.7
CDH11-210ENST00000564770 FOXP4Q8IVH2 680 aaPredicted RBP19.44■□□□□ 0.7
CDH11-210ENST00000564770 ANTXR1Q9H6X2 564 aa19.44■□□□□ 0.7
CDH11-210ENST00000564770 TMOD4Q9NZQ9 345 aa19.44■□□□□ 0.7
CDH11-210ENST00000564770 NR2E3Q9Y5X4 410 aa19.44■□□□□ 0.7
CDH11-210ENST00000564770 A0A0G2JMZ2 1700 aa19.43■□□□□ 0.7
CDH11-210ENST00000564770 USP17L10C9JJH3 530 aa19.43■□□□□ 0.7
CDH11-210ENST00000564770 MAGEB6Q8N7X4 407 aa19.43■□□□□ 0.7
CDH11-210ENST00000564770 TRIM34Q9BYJ4 488 aa19.43■□□□□ 0.7
CDH11-210ENST00000564770 EMILIN3Q9NT22 766 aa19.43■□□□□ 0.7
CDH11-210ENST00000564770 EXOC6BQ9Y2D4 811 aa19.43■□□□□ 0.7
CDH11-210ENST00000564770 EVI5O60447 810 aa19.42■□□□□ 0.7
CDH11-210ENST00000564770 IGSF3O75054 1194 aa19.42■□□□□ 0.7
CDH11-210ENST00000564770 GH2P01242 217 aa19.42■□□□□ 0.7
CDH11-210ENST00000564770 HLA-DOAP06340 250 aa19.42■□□□□ 0.7
CDH11-210ENST00000564770 CYP2B6P20813 491 aa19.42■□□□□ 0.7
CDH11-210ENST00000564770 MAP3K21Q5TCX8 1036 aa19.42■□□□□ 0.7
CDH11-210ENST00000564770 PORCNQ9H237 461 aa19.42■□□□□ 0.7
CDH11-210ENST00000564770 GINM1Q9NU53 330 aa19.42■□□□□ 0.7
CDH11-210ENST00000564770 RBPJLQ9UBG7 517 aa19.42■□□□□ 0.7
CDH11-210ENST00000564770 RPTORQ8N122 1335 aa19.42■□□□□ 0.7
CDH11-210ENST00000564770 C19orf81C9J6K1 198 aa19.41■□□□□ 0.7
CDH11-210ENST00000564770 HMX1Q9NP08 348 aaPredicted RBP19.41■□□□□ 0.7
CDH11-210ENST00000564770 PARP14Q460N5 1801 aa19.41■□□□□ 0.7
CDH11-210ENST00000564770 MYH7P12883 1935 aa19.41■□□□□ 0.7
CDH11-210ENST00000564770 RLFQ13129 1914 aa19.41■□□□□ 0.7
CDH11-210ENST00000564770 PRKAR2AP13861 404 aaKnown RBP19.4■□□□□ 0.7
CDH11-210ENST00000564770 CAPN2P17655 700 aa19.4■□□□□ 0.7
CDH11-210ENST00000564770 ERVK-9P63128 1117 aa19.4■□□□□ 0.7
CDH11-210ENST00000564770 ERVK-24P63145 666 aa19.4■□□□□ 0.7
CDH11-210ENST00000564770 Q3C1V9 767 aa19.4■□□□□ 0.7
CDH11-210ENST00000564770 TATDN1Q6P1N9 297 aa19.4■□□□□ 0.7
CDH11-210ENST00000564770 NECAB2Q7Z6G3 386 aa19.4■□□□□ 0.7
CDH11-210ENST00000564770 ANKLE1Q8NAG6 615 aa19.4■□□□□ 0.7
CDH11-210ENST00000564770 GPRC5AQ8NFJ5 357 aa19.4■□□□□ 0.7
CDH11-210ENST00000564770 SOCS4Q8WXH5 440 aa19.4■□□□□ 0.7
CDH11-210ENST00000564770 PAGR1Q9BTK6 254 aa19.4■□□□□ 0.7
CDH11-210ENST00000564770 BAZ2AQ9UIF9 1905 aaKnown RBP19.4■□□□□ 0.7
CDH11-210ENST00000564770 SOX1O00570 391 aaPredicted RBP19.39■□□□□ 0.69
CDH11-210ENST00000564770 USP5P45974 858 aa19.39■□□□□ 0.69
CDH11-210ENST00000564770 ZYXQ15942 572 aaKnown RBP19.39■□□□□ 0.69
CDH11-210ENST00000564770 AACSQ86V21 672 aa19.39■□□□□ 0.69
CDH11-210ENST00000564770 PANK1Q8TE04 598 aa19.39■□□□□ 0.69
CDH11-210ENST00000564770 USP6NLQ92738 828 aa19.39■□□□□ 0.69
CDH11-210ENST00000564770 C12orf42Q96LP6 360 aa19.39■□□□□ 0.69
CDH11-210ENST00000564770 NUDT12Q9BQG2 462 aa19.39■□□□□ 0.69
CDH11-210ENST00000564770 RIOK1Q9BRS2 568 aaKnown RBP19.39■□□□□ 0.69
CDH11-210ENST00000564770 EHD4Q9H223 541 aa19.39■□□□□ 0.69
CDH11-210ENST00000564770 SERPINB13Q9UIV8 391 aa19.39■□□□□ 0.69
CDH11-210ENST00000564770 ZNF236Q9UL36 1845 aa19.39■□□□□ 0.69
CDH11-210ENST00000564770 CNMDO75829 334 aa19.38■□□□□ 0.69
CDH11-210ENST00000564770 SHMT1P34896 483 aa19.38■□□□□ 0.69
CDH11-210ENST00000564770 EVX2Q03828 476 aa19.38■□□□□ 0.69
CDH11-210ENST00000564770 CCL14Q16627 93 aa19.38■□□□□ 0.69
CDH11-210ENST00000564770 USP17L2Q6R6M4 530 aa19.38■□□□□ 0.69
CDH11-210ENST00000564770 GPR142Q7Z601 462 aa19.38■□□□□ 0.69
CDH11-210ENST00000564770 C7orf61Q8IZ16 206 aa19.38■□□□□ 0.69
CDH11-210ENST00000564770 STAP2Q9UGK3 403 aa19.38■□□□□ 0.69
CDH11-210ENST00000564770 OGDHLQ9ULD0 1010 aa19.38■□□□□ 0.69
CDH11-210ENST00000564770 PFASO15067 1338 aa19.37■□□□□ 0.69
CDH11-210ENST00000564770 XRCC5P13010 732 aaKnown RBP19.37■□□□□ 0.69
CDH11-210ENST00000564770 MAPK4P31152 587 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms